Sequence Description Alias PCC hrr Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.9576607451831951 1 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.9489851061549135 4 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.9455402509881261 4 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.9451558779575042 4 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9418614333468474 10 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.9394385774974298 6 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.936696319222091 7 Cpa|evm.model.tig00000980.5 tig00000980_g6130.t1 0.9363845178407277 8 Cpa|evm.model.tig00000789.40 tig00000789_g4133.t1 0.9335127365285112 9 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.9334214310927539 10 Cpa|evm.model.tig00020544.4 tig00020544_g10484.t1 0.9328288654258599 11 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.9317638643854257 12 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.9313812330206404 20 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.9276976833995876 14 Cpa|evm.model.tig00001107.5 tig00001107_g7093.t1 0.9256844286846156 15 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.925077553987101 16 Cpa|evm.model.tig00020848.76 0.9232275038613448 17 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana tig00021464_g21757.t1 0.9224002071435199 18 Cpa|evm.model.tig00021589.1 tig00021589_g22707.t1 0.9222703483897244 19 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.9222371853296666 20 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.922141644978993 21 Cpa|evm.model.tig00000704.50 tig00000704_g3337.t1 0.9187056541039462 22 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.9182418636116648 23 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.9181481379480715 24 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000350_g24328.t1 0.9181315891467754 25 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.9179296733623054 26 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.9170045162746622 27 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.9163201671193282 28 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.916212066374878 29 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.915216242377907 30 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase tig00000829_g4671.t1 0.9142882409955926 31 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.9133187480654121 32 Cpa|evm.model.tig00001107.6 tig00001107_g7093.t1 0.9126736915796195 33 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica tig00020903_g15085.t1 0.9121605446465466 34 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.9121309727446362 35 Cpa|evm.model.tig00000704.46 Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii tig00000704_g3333.t1 0.9107640319739714 36 Cpa|evm.model.tig00000076.91 tig00000076_g2389.t1 0.910646390504798 37 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.9100981278893139 38 Cpa|evm.model.tig00000037.6 tig00000037_g10073.t1 0.9092470820274184 39 Cpa|evm.model.tig00020531.35 tig00020531_g10036.t2 0.908876581377747 40 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.9080642715263333 41 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component tig00020553_g10636.t1 0.9078374574417375 42 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 tig00000704_g3318.t1 0.9073258754378694 43 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.9072821565380235 44 Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.9072030820491513 45 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.9070200346384999 46 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.9065501055127737 47 Cpa|evm.model.tig00001229.13 tig00001229_g7845.t1 0.9064360619115108 48 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component tig00021357_g20735.t1 0.9062564728708056 49 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.9062474354035068 50 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.9058766955051096 51 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.9052102456289004 52 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.9046054547604965 53 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.9044597805591628 54 Cpa|evm.model.tig00000388.24 tig00000388_g24785.t1 0.9043687097789036 55 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana tig00000217_g19173.t1 0.9043486937561289 56 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.9034158444587643 57 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component tig00000217_g19159.t1 0.9032813644421747 58 Cpa|evm.model.tig00021319.55 Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii tig00021319_g20248.t1 0.9028841035852003 59 Cpa|evm.model.tig00000241.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF3 component tig00000241_g20883.t1 0.902412013472337 60 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.9016574019493859 61 Cpa|evm.model.tig00001049.12 tig00001049_g6662.t1 0.9011053943322671 62 Cpa|evm.model.tig00021464.50 tig00021464_g21754.t1 0.9009605298112523 63 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.9006477177132427 64 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii tig00000704_g3354.t1 0.9005538363934785 65 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component tig00021612_g22890.t1 0.9003890472986936 66 Cpa|evm.model.tig00021357.13 tig00021357_g20746.t1 0.9000941625459512 67 Cpa|evm.model.tig00021612.56 tig00021612_g22896.t1 0.8992223435826724 68 Cpa|evm.model.tig00001049.13 tig00001049_g6663.t1 0.8990872497967186 69 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.898104320077055 70 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8977264364566248 71 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component tig00000792_g4177.t1 0.8976613340660047 72 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.8976519939330465 73 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.8976242546939179 74 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.8975000698526311 75 Cpa|evm.model.tig00021612.34 tig00021612_g22877.t1 0.8974843684485255 76 Cpa|evm.model.tig00000227.46 Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana tig00000227_g19838.t1 0.896908907730309 77 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.8968549598067374 78 Cpa|evm.model.tig00020848.54 tig00020848_g14585.t1 0.8963061107622503 79 Cpa|evm.model.tig00020554.15 tig00020554_g10801.t1 0.8962955445827643 80 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase tig00000912_g5432.t1 0.8962555098253732 81 Cpa|evm.model.tig00021464.49 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana tig00021464_g21753.t1 0.8960568070220616 82 Cpa|evm.model.tig00001085.12 tig00001085_g6953.t1 0.8951467378105005 83 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.8948963270279625 84 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.8943971233265418 85 Cpa|evm.model.tig00001600.14 tig00001600_g9399.t1 0.8933368210013968 86 Cpa|evm.model.tig00021590.4 tig00021590_g22761.t1 0.8929606123419993 87 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8920689183982674 88 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.8919623123732846 89 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana tig00000704_g3322.t1 0.8916160924090002 90 Cpa|evm.model.tig00020510.42 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-9 motor protein tig00020510_g9825.t1 0.8908357990021589 91 Cpa|evm.model.tig00021612.39 tig00021612_g22881.t1 0.890707246616734 92 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8900729280609865 93 Cpa|evm.model.tig00000203.14 tig00000203_g17117.t1 0.8900273521918788 94 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.8896744214397796 95 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.8896617910564985 96 Cpa|evm.model.tig00001094.30 Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica tig00001094_g7002.t1 0.8895679112178303 97 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.8894037332870643 98 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8892222243177222 99 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.889089056521321 100