Sequence Description Alias PCC hrr Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9574193166572509 8 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9540466589598142 10 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9537014930650846 6 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.952309494681597 14 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9513103030620765 8 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9500625321587006 6 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.9494729272249195 7 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.9493091250162496 8 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16502.t1 0.9485318635187667 9 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.9467366544969654 10 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.9437365535458176 11 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9415578275468347 18 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.9414144045793656 13 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.9412155283995772 18 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9370596838230106 24 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.9346551195966434 33 Cpa|evm.model.tig00000344.14 0.9342279708483844 17 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9331920553661053 18 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9330258853659252 26 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.9318852538578951 21 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9316197281520593 33 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.9311618396303476 22 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9310170433821363 39 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.930224900578877 29 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.929442879688081 25 Cpa|evm.model.tig00020951.45 tig00020951_g16446.t1 0.9293695210278645 26 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.928761734399119 27 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9281707216010744 32 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9276251162993319 29 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.9273051893451731 30 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.9264864448897537 31 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.926465145972948 32 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.9259012309651435 33 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.9251970087675186 38 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.9240567061723582 35 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9230895784524605 36 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.9224545781450088 37 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.922290006977317 38 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9214619526948498 41 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.9205595527361464 40 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.918723874983627 41 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.9184834151996278 42 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.9184250675728965 43 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.9158162997725003 44 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020660_g12512.t1 0.9148275699911309 45 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.913703925307181 51 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9131435774765905 47 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9126758902577332 48 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.9121833597499696 49 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.9108717892514431 50 Cpa|evm.model.tig00000190.38 tig00000190_g13857.t1 0.9072743832967942 51 Cpa|evm.model.tig00021441.9 tig00021441_g21550.t1 0.9066064626952047 52 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.9057838224809995 53 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.9056452679992781 54 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.9055635438445794 55 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.9044696618608001 56 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.9032621059187187 57 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.9023937899355194 58 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.9023524418684441 59 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.9019285684614403 60 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.900924227709909 61 Cpa|evm.model.tig00000691.29 tig00000691_g3181.t1 0.9003496543473417 62 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000093_g3534.t1 0.9002135079014524 75 Cpa|evm.model.tig00000248.21 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana tig00000248_g21787.t1 0.8994445030086409 64 Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 0.8994360485125181 77 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.8985633821876544 66 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana tig00020938_g16134.t1 0.8968380603316372 71 Cpa|evm.model.tig00020553.191 ABC transporter C family member 11 OS=Arabidopsis thaliana tig00020553_g10681.t1 0.8955939154549336 68 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.895308360900234 69 Cpa|evm.model.tig00000157.5 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000157_g9593.t1 0.8922575457676452 70 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana tig00001085_g6960.t1 0.8919954884543028 71 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.8905010122280511 72 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.8878597905465965 73 Cpa|evm.model.tig00021108.36 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana tig00021108_g18328.t1 0.8875395425769574 74 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.8874587876391656 75 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.8873248892275587 76 Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana tig00020603_g11762.t1 0.8867396643853566 77 Cpa|evm.model.tig00020710.126 tig00020710_g13390.t1 0.8864620687013085 78 Cpa|evm.model.tig00001065.21 tig00001065_g6722.t1 0.8845236755662624 79 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.883752476933205 80 Cpa|evm.model.tig00000760.8 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000760_g3929.t1 0.8826241859530813 81 Cpa|evm.model.tig00021126.3 ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana tig00021126_g18456.t1 0.8824855743761598 82 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8820982293654375 83 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease tig00000912_g5437.t1 0.8820422773312844 84 Cpa|evm.model.tig00000430.44 tig00000430_g633.t1 0.8803482813309498 85 Cpa|evm.model.tig00021464.19 tig00021464_g21725.t1 0.8799252027909231 86 Cpa|evm.model.tig00020807.17 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor(50.1.3 : 216.1) & NADPH-dependent oxidoreductase 2-alkenal reductase OS=Arabidopsis thaliana tig00020807_g14070.t1 0.8794280066812608 87 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana tig00020961_g16679.t1 0.8783320831458687 88 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.8780858405549175 89 Cpa|evm.model.tig00020660.34 tig00020660_g12531.t1 0.8779230655028666 90 Cpa|evm.model.tig00000796.24 tig00000796_g4247.t1 0.8772015556248149 91 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.8763572953278745 92 Cpa|evm.model.tig00001487.8 tig00001487_g8937.t1 0.8757881037111549 93 Cpa|evm.model.tig00021517.27 tig00021517_g22015.t1 0.8736773664231393 95 Cpa|evm.model.tig00000169.33 tig00000169_g11905.t1 0.8730501472850174 96 Cpa|evm.model.tig00000241.114 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase tig00000241_g20980.t1 0.8727215689785318 97 Cpa|evm.model.tig00021537.37 tig00021537_g22288.t1 0.8725172235333343 98 Cpa|evm.model.tig00021312.29 tig00021312_g20063.t1 0.87010717212904 99 Cpa|evm.model.tig00000204.30 tig00000204_g17698.t1 0.8699892214169838 100