Sequence Description Alias PCC hrr Cpa|evm.model.tig00020848.77 tig00020848_g14607.t1 0.9442663794381688 2 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana tig00000615_g2598.t1 0.9411305160374732 2 Cpa|evm.model.tig00020554.14 tig00020554_g10800.t1 0.9371454633870047 3 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component tig00020909_g15357.t1 0.9269505396071249 4 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.9268130554373198 9 Cpa|evm.model.tig00020961.139 tig00020961_g16759.t1 0.9238726121066876 6 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.9200146583365898 14 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.9196036046161694 10 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.9190434812796462 25 Cpa|evm.model.tig00000217.36 tig00000217_g19169.t1 0.9172132916927174 10 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.9164736844863806 13 Cpa|evm.model.tig00021319.61 tig00021319_g20254.t1 0.9157909068406271 14 Cpa|evm.model.tig00000194.20 tig00000194_g14748.t1 0.9125381301630854 13 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component tig00000792_g4177.t1 0.9124556961810079 22 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase tig00020848_g14564.t1 0.9116528768801766 15 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.910876401817766 27 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.9090229709988421 17 Cpa|evm.model.tig00000241.178 Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD2 component tig00000241_g21049.t1 0.9076918526634702 18 Cpa|evm.model.tig00001206.14 Cell cycle.cytokinesis.phragmoplast microtubule organization.EB1 microtubule plus-end-tracking protein tig00001206_g7499.t1 0.9063984139742542 19 Cpa|evm.model.tig00001107.5 tig00001107_g7093.t1 0.9062398478659519 32 Cpa|evm.model.tig00020693.8 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF2 component tig00020693_g13013.t1 0.9060124115777135 21 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component tig00000704_g3335.t1 0.9059790414390537 22 Cpa|evm.model.tig00001001.10 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-A cofactor tig00001001_g6200.t1 0.9045933920206476 23 Cpa|evm.model.tig00000411.74 tig00000411_g580.t1 0.9043724359376323 24 Cpa|evm.model.tig00021720.13 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component tig00021720_g23183.t1 0.9041683791259313 25 Cpa|evm.model.tig00020848.70 Gamma-tubulin complex component 3 OS=Arabidopsis thaliana tig00020848_g14601.t1 0.9039455706431494 26 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.9034065921989564 27 Cpa|evm.model.tig00020848.76 0.9025893624598889 28 Cpa|evm.model.tig00000704.50 tig00000704_g3337.t1 0.9019145239515602 33 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.9008529860973672 30 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.900331118626659 49 Cpa|evm.model.tig00020903.15 tig00020903_g15083.t1 0.9001000297215686 32 Cpa|evm.model.tig00020538.71 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component tig00020538_g10377.t1 0.8999477286165767 33 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.8997876671615546 34 Cpa|evm.model.tig00000789.36 Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein tig00000789_g4130.t1 0.8987506784513706 35 Cpa|evm.model.tig00000880.23 PHD finger protein ING1 OS=Arabidopsis thaliana tig00000880_g5181.t1 0.8987499890723235 36 Cpa|evm.model.tig00001073.12 13 kDa deflagellation-inducible protein OS=Chlamydomonas reinhardtii tig00001073_g6820.t1 0.898054269713077 37 Cpa|evm.model.tig00000754.21 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE3 component tig00000754_g3904.t1 0.8975759033838926 38 Cpa|evm.model.tig00000980.5 tig00000980_g6130.t1 0.895760621549021 39 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana tig00000704_g3341.t1 0.8952712816856907 40 Cpa|evm.model.tig00020780.62 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD2 component tig00020780_g13811.t1 0.8951356247188043 41 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.8947624676233757 61 Cpa|evm.model.tig00020903.45 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.DSS1/Sem1 component tig00020903_g15114.t1 0.8926339335641325 43 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component tig00000829_g4665.t1 0.8923882142664845 44 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.8921218674109692 45 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component tig00020553_g10636.t1 0.8918509056867496 46 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone tig00000857_g4927.t1 0.8915622133215518 47 Cpa|evm.model.tig00020554.144 0.8912826476946606 48 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.8912823099407174 85 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component tig00021357_g20735.t1 0.8910063973435985 50 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component tig00020553_g10649.t1 0.890389734321533 51 Cpa|evm.model.tig00000076.93 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component tig00000076_g2391.t1 0.8900036135554575 52 Cpa|evm.model.tig00000944.19 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component tig00000944_g5941.t1 0.8891852826252528 53 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8891662253865806 54 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.8885521441354174 62 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana tig00021357_g20766.t1 0.8874627091689337 57 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana tig00000241_g20886.t1 0.8870389734587739 58 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.8869376305303971 59 Cpa|evm.model.tig00021612.39 tig00021612_g22881.t1 0.8865283888193447 60 Cpa|evm.model.tig00020903.47 tig00020903_g15116.t1 0.8858694539456755 61 Cpa|evm.model.tig00001003.32 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit tig00001003_g6287.t1 0.8855759845774763 62 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana tig00021168_g19079.t1 0.8853155516708332 63 Cpa|evm.model.tig00001049.12 tig00001049_g6662.t1 0.8843977772820926 64 Cpa|evm.model.tig00001408.10 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase tig00001408_g8605.t1 0.8841360541254542 65 Cpa|evm.model.tig00001374.6 tig00001374_g8498.t1 0.8837240341781705 66 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.8837232832513259 67 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.8829965703729851 68 Cpa|evm.model.tig00020556.31 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00020556_g10999.t1 0.8815512589963832 69 Cpa|evm.model.tig00022075.57 Chaperone protein dnaJ 6 OS=Arabidopsis thaliana tig00022075_g23618.t1 0.8808053628143743 70 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase tig00020553_g10634.t1 0.8801785320917402 71 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.8799331145949548 72 Cpa|evm.model.tig00000219.44 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit tig00000219_g19483.t1 0.8795313448156694 73 Cpa|evm.model.tig00000789.47 tig00000789_g4140.t2 0.87922695253446 75 Cpa|evm.model.tig00021435.44 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.878460297392468 76 Cpa|evm.model.tig00000692.67 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD1 component tig00000692_g3266.t1 0.8766288178496491 77 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.876484537895729 94 Cpa|evm.model.tig00001229.22 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana tig00001229_g7856.t1 0.8753885972369435 79 Cpa|evm.model.tig00000076.52 tig00000076_g2352.t1 0.8753339274266074 80 Cpa|evm.model.tig00020531.48 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm7 component tig00020531_g10054.t1 0.8746976873637446 81 Cpa|evm.model.tig00000144.125 Calcineurin B-like protein 2 OS=Arabidopsis thaliana tig00000144_g9120.t1 0.8745684699645636 82 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit tig00020903_g15096.t1 0.874555833384407 83 Cpa|evm.model.tig00001085.12 tig00001085_g6953.t1 0.8735786360881577 84 Cpa|evm.model.tig00000980.1 tig00000980_g6126.t1 0.8734216790362992 85 Cpa|evm.model.tig00001229.19 tig00001229_g7852.t1 0.8732028015120453 86 Cpa|evm.model.tig00020539.41 tig00020539_g10434.t1 0.8728859503788124 87 Cpa|evm.model.tig00000241.116 tig00000241_g20982.t1 0.872870837890939 88 Cpa|evm.model.tig00000227.46 Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana tig00000227_g19838.t1 0.8723686196257795 89 Cpa|evm.model.tig00021589.5 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component tig00021589_g22710.t1 0.8712667403872829 90 Cpa|evm.model.tig00000789.46 tig00000789_g4140.t1 0.8705916827736425 92 Cpa|evm.model.tig00021726.1 tig00021726_g23252.t1 0.8703373282429971 93 Cpa|evm.model.tig00001428.10 tig00001428_g8729.t1 0.8695090897245008 94 Cpa|evm.model.tig00021127.182 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.C-class RAB GTPase tig00021127_g18866.t1 0.8681245357258419 95 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component tig00000829_g4667.t1 0.8676454567101809 96 Cpa|evm.model.tig00021234.43 0.8665017723180104 97 Cpa|evm.model.tig00020961.73 tig00020961_g16694.t1 0.8664029469812609 98 Cpa|evm.model.tig00000402.43 tig00000402_g220.t1 0.8662820453656059 99