Sequence Description Alias PCC hrr Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.9652928881574717 2 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.9494376658098695 2 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.9437741835458118 4 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.942798506117827 4 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.9391649786864613 5 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.9267601560381447 7 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.9263856921308318 7 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.9236133392869632 8 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.9225853559573546 9 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin tig00000789_g4137.t1 0.9204235410679745 10 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.9188325479074423 26 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana tig00020909_g15353.t1 0.915729199298835 12 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.9132065160937767 13 Cpa|evm.model.tig00020553.139 tig00020553_g10629.t1 0.9112273290653427 14 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.910525210337431 15 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.9065501055127737 47 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.903813658627724 20 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.90217125002695 19 Cpa|evm.model.tig00020903.16 tig00020903_g15084.t1 0.9012294737572 19 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.8975501595614154 20 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8957421435177112 44 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor tig00000383_g24650.t1 0.8916794409025149 22 Cpa|evm.model.tig00001234.12 tig00001234_g7735.t1 0.8913873065126386 23 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.8910563942579712 24 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana tig00000704_g3322.t1 0.891014278641533 35 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.890913413028762 86 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.889693198145683 31 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.8896184612189032 47 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.8888087451263321 51 Cpa|evm.model.tig00000402.71 Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii tig00000402_g248.t1 0.8871178950813579 30 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit tig00020553_g10647.t1 0.8862732137129568 40 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.8857401383164967 92 Cpa|evm.model.tig00001107.6 tig00001107_g7093.t1 0.8856157258925386 62 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.8853957886675284 66 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.8834712163028061 52 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.8822694600097893 65 Cpa|evm.model.tig00000478.39 tig00000478_g1288.t1 0.8808348997816198 37 Cpa|evm.model.tig00000829.30 Protein modification.phosphorylation.ULK kinase tig00000829_g4671.t1 0.8807538516672793 57 Cpa|evm.model.tig00000704.36 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3324.t1 0.8800511288614211 39 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component tig00000350_g24315.t1 0.8781028421312643 57 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana tig00000144_g9159.t1 0.8777249625064434 91 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component tig00021612_g22890.t1 0.8776415904172999 43 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter tig00000194_g14776.t1 0.8771224117431988 44 Cpa|evm.model.tig00001372.8 0.876954700152612 45 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase tig00001234_g7732.t1 0.8767151836973023 71 Cpa|evm.model.tig00000842.34 tig00000842_g4855.t1 0.8763667318855499 47 Cpa|evm.model.tig00001107.1 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component tig00001107_g7088.t1 0.8753011870860337 49 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.8752071200934246 52 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana tig00021464_g21757.t1 0.8739044689627753 55 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component tig00021571_g22362.t1 0.8724623475411839 57 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component tig00022075_g23612.t1 0.8712426510614243 53 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase tig00001107_g7096.t1 0.8710722624289942 75 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana tig00001003_g6291.t1 0.8707379154829514 55 Cpa|evm.model.tig00000789.42 tig00000789_g4135.t1 0.8691629593627248 56 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component tig00000217_g19159.t1 0.8689544595703337 57 Cpa|evm.model.tig00021435.13 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component tig00021435_g21391.t1 0.8686424048100073 58 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8685848150574098 59 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.8680376124854012 61 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.8675338348889386 73 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.8671665873384471 63 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.866918000554861 64 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component tig00000912_g5422.t1 0.8667744594184723 65 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component tig00000319_g24143.t1 0.8657229964733191 66 Cpa|evm.model.tig00000388.13 tig00000388_g24776.t1 0.8654411876081491 68 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana tig00020684_g12880.t1 0.865052719444016 69 Cpa|evm.model.tig00000194.23 tig00000194_g14751.t1 0.8647016166141809 80 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component tig00020538_g10321.t1 0.8646800701301846 71 Cpa|evm.model.tig00000912.29 tig00000912_g5434.t1 0.8627510002340514 74 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8624241525543321 89 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit tig00000444_g801.t1 0.8623326211763143 77 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica tig00020684_g12886.t1 0.8599715757741828 79 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component tig00021352_g20713.t1 0.8592387611384609 80 Cpa|evm.model.tig00000076.105 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana tig00000076_g2403.t1 0.8592102993789706 81 Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 0.8588518350203582 82 Cpa|evm.model.tig00020538.10 Calmodulin OS=Helianthus annuus tig00020538_g10316.t1 0.8577033326329926 83 Cpa|evm.model.tig00000704.58 Lipid metabolism.glycerolipid synthesis.phosphatidylglycerol.CDP-diacylglycerol synthase tig00000704_g3344.t1 0.8575083890108829 84 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana tig00020848_g14555.t1 0.8575025267308214 85 Cpa|evm.model.tig00000402.8 tig00000402_g185.t1 0.8572467830321142 86 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000836_g4692.t1 0.856633413818293 93 Cpa|evm.model.tig00001229.14 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM conjugation E2 protein tig00001229_g7846.t1 0.85608109016723 89 Cpa|evm.model.tig00000219.44 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit tig00000219_g19483.t1 0.8524971389069196 95 Cpa|evm.model.tig00000144.174 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana tig00000144_g9167.t1 0.8522677418525583 96 Cpa|evm.model.tig00000829.5 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase tig00000829_g4647.t1 0.8512851317948583 97 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8508094892884599 98 Cpa|evm.model.tig00021612.33 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 253.5) tig00021612_g22877.t1 0.8507130790629484 99 Cpa|evm.model.tig00000388.17 tig00000388_g24779.t1 0.8505391837743976 100