Sequence Description Alias PCC hrr Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica tig00020684_g12886.t1 0.9616923920202045 1 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana tig00001003_g6291.t1 0.9378046357214407 2 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component tig00000217_g19161.t1 0.9353882797016779 7 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component tig00021319_g20258.t1 0.9271959352507684 14 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor tig00020903_g15115.t1 0.9263487017780074 5 Cpa|evm.model.tig00021357.6 tig00021357_g20739.t1 0.9262659905871591 6 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component tig00000197_g15694.t1 0.9254611637447181 7 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis tig00001107_g7092.t1 0.9232334170933009 8 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana tig00000842_g4823.t1 0.9225853559573546 9 Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana tig00020554_g10922.t1 0.9137403386082277 10 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor tig00000350_g24330.t1 0.9136810741215723 11 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase tig00001049_g6659.t1 0.9099804418033159 12 Cpa|evm.model.tig00000704.40 tig00000704_g3327.t1 0.9094599465890036 25 Cpa|evm.model.tig00000615.67 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor tig00000615_g2597.t1 0.908732118804199 14 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.9052102456289004 52 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor tig00000789_g4132.t1 0.9044562419162422 16 Cpa|evm.model.tig00001424.4 tig00001424_g8703.t1 0.9043757169727289 21 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana tig00020553_g10648.t1 0.902800647262312 20 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana tig00000704_g3322.t1 0.9026809074936458 23 Cpa|evm.model.tig00020554.42 tig00020554_g10824.t1 0.9002483123951515 20 Cpa|evm.model.tig00000319.24 tig00000319_g24137.t1 0.8986683037593989 21 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein tig00020554_g10918.t1 0.8984893920908447 29 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8981906593286872 23 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease tig00020903_g15082.t1 0.8958481968243149 43 Cpa|evm.model.tig00020918.9 tig00020918_g15886.t1 0.895555907626845 37 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein tig00000829_g4658.t1 0.8949831638938806 26 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component tig00001206_g7500.t1 0.8935845794369787 43 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.8901007672931042 35 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii tig00000912_g5414.t1 0.8890788618428935 77 Cpa|evm.model.tig00000615.61 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor tig00000615_g2590.t1 0.888575325408295 30 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana tig00000912_g5433.t1 0.8858074169367676 64 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component tig00021589_g22732.t1 0.884975974947873 44 Cpa|evm.model.tig00000241.177 tig00000241_g21047.t1 0.8842121859630632 33 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana tig00000704_g3311.t1 0.8839524303642187 67 Cpa|evm.model.tig00000789.38 tig00000789_g4132.t1 0.8839241674911809 35 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component tig00020538_g10321.t1 0.8838512393546667 36 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.8835263247489615 37 Cpa|evm.model.tig00001003.41 tig00001003_g6295.t1 0.8834799744293372 38 Cpa|evm.model.tig00000944.34 tig00000944_g5957.t1 0.8834725027667802 39 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides tig00020531_g10062.t1 0.8827957638753691 40 Cpa|evm.model.tig00021123.29 tig00021123_g18513.t1 0.882080291358006 41 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.8807474159412085 77 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana tig00020848_g14555.t1 0.8797047157028764 43 Cpa|evm.model.tig00021357.26 tig00021357_g20756.t1 0.8787511620691363 63 Cpa|evm.model.tig00000076.89 Periodic tryptophan protein 2 OS=Arabidopsis thaliana tig00000076_g2387.t1 0.8781413901298375 46 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor tig00020614_g12214.t1 0.8751206083783186 75 Cpa|evm.model.tig00001093.3 tig00001093_g6878.t1 0.8750798848829332 49 Cpa|evm.model.tig00000704.46 Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii tig00000704_g3333.t1 0.8743545525616477 93 Cpa|evm.model.tig00000037.36 tig00000037_g10104.t1 0.8737720547953373 51 Cpa|evm.model.tig00021502.1 tig00021502_g22051.t1 0.8710025434807336 52 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 tig00021589_g22717.t1 0.8707668813277517 54 Cpa|evm.model.tig00001234.12 tig00001234_g7735.t1 0.8703440259474052 55 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana tig00021464_g21757.t1 0.8703256405180143 61 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein tig00000319_g24138.t1 0.8683926512930342 58 Cpa|evm.model.tig00020553.139 tig00020553_g10629.t1 0.8683630252513401 59 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8662770315236563 61 Cpa|evm.model.tig00000403.66 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 11 tig00000403_g325.t1 0.8661382092486742 62 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component tig00021348_g20598.t1 0.8660223109875872 63 Cpa|evm.model.tig00001372.8 0.8653076078084984 64 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00021502_g22052.t1 0.8644418238486256 68 Cpa|evm.model.tig00000194.23 tig00000194_g14751.t1 0.8636054351591861 84 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component tig00021571_g22362.t1 0.8629616738186124 87 Cpa|evm.model.tig00000704.39 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3326.t1 0.862015084572335 70 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.8620111600709921 87 Cpa|evm.model.tig00021123.42 tig00021123_g18525.t1 0.8613021003579036 92 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 tig00000704_g3318.t1 0.8609511157198243 94 Cpa|evm.model.tig00021464.48 tig00021464_g21752.t1 0.8609280279702987 74 Cpa|evm.model.tig00001600.14 tig00001600_g9399.t1 0.8600166782090217 83 Cpa|evm.model.tig00000381.6 tig00000381_g24530.t1 0.8595503671657857 76 Cpa|evm.model.tig00020554.43 28 kDa inner dynein arm light chain, axonemal OS=Chlamydomonas reinhardtii tig00020554_g10826.t1 0.8594562650161974 88 Cpa|evm.model.tig00000704.36 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana tig00000704_g3324.t1 0.8590509178312484 80 Cpa|evm.model.tig00000944.38 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor tig00000944_g5960.t1 0.8587861100438413 81 Cpa|evm.model.tig00021123.23 tig00021123_g18507.t1 0.8586223433964225 82 Cpa|evm.model.tig00021612.34 tig00021612_g22877.t1 0.8584800297515579 83 Cpa|evm.model.tig00000704.62 tig00000704_g3346.t2 0.8584114185977002 84 Cpa|evm.model.tig00000402.8 tig00000402_g185.t1 0.8584018943003537 85 Cpa|evm.model.tig00020848.39 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst tig00020848_g14566.t1 0.8562702497804737 96 Cpa|evm.model.tig00000404.29 tig00000404_g392.t1 0.8559851139480412 88 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component tig00021352_g20713.t1 0.855912338068647 89 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana tig00020909_g15353.t1 0.8556961219319722 90 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.8512659302762725 96 Cpa|evm.model.tig00000217.26 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE4 Kleisin-like bridging component tig00000217_g19159.t1 0.8512484416168162 97 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase tig00000203_g17139.t1 0.850248011372526 98