Heatmap: Cluster_307 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00020608.9 (tig00021047_g18137.t1)
-0.26 -0.05 -0.2 0.52 -0.28 -0.22 0.4 0.04 -0.35 0.46 -0.21 -0.23 0.04 -0.9 -0.62 0.18 -0.95 -1.84 -1.09 0.14 -0.61 1.26 -1.86 -0.11 1.15 0.84
Cpa|evm.model.tig00021046.3 (tig00021046_g17784.t1)
1.18 - - 1.08 -0.35 -0.53 - - - - -0.58 -0.45 - -1.13 0.95 - - -1.13 -0.55 - - 2.44 - 0.06 1.81 2.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.