Heatmap: Cluster_1 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_10216 (10216)	-	-	1.02	2.03	1.25	-2.09	1.18	-	-	-	-
Transcript_contig_10217 (10217)	-	-	-	2.4	1.14	-0.88	1.56	-	-	-	-
Transcript_contig_10499 (10499)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_1087 (1087)	-0.77	-	1.83	0.86	0.83	-1.77	0.9	-	-	-0.25	-1.86
Transcript_contig_11350 (11350)	0.21	-	1.42	0.83	1.64	-	1.19	-	-	-	-
Transcript_contig_11409 (11409)	-0.23	-	-	2.81	-	-	1.64	-	-	-	-
Transcript_contig_11785 (11785)	-	-	-	3.11	-	-	1.22	-	-	-	-
Transcript_contig_12091 (12091)	-1.75	-4.77	2.07	1.51	0.35	0.18	0.28	-	-	-	-
Transcript_contig_12340 (12340)	-	-	-0.39	1.96	1.49	-1.18	1.54	-	-	-	-2.49
Transcript_contig_12834 (12834)	-0.08	-	-	1.64	-	0.34	1.06	-	0.57	-	1.08
Transcript_contig_12980 (12980)	-0.73	-	0.47	2.03	-0.09	-0.32	1.49	-	-	-2.5	-2.41
Transcript_contig_13041 (13041)	-0.42	-0.12	-1.46	1.29	0.77	-0.24	1.18	-	-	-2.29	0.58
Transcript_contig_13063 (13063)	0.83	-	-	2.09	-0.06	-0.08	1.61	-	-	-	-
Transcript_contig_13419 (13419)	0.57	-1.0	1.62	1.31	-1.74	-0.76	1.04	-0.96	-	-	-
Transcript_contig_13436 (13436)	0.65	-	0.93	1.19	0.3	-0.84	1.31	-	-1.64	-1.11	-2.36
Transcript_contig_1435 (1435)	-1.03	-	-	2.5	0.4	-	1.83	-	-	-	-
Transcript_contig_14568 (14568)	-	-	-	2.13	-	0.73	0.97	-	-	0.65	0.52
Transcript_contig_14934 (14934)	-1.02	-	-	1.47	-	-0.15	1.99	-	0.08	0.38	-1.0
Transcript_contig_15200 (15200)	0.09	-1.29	-	1.77	-	-0.84	-0.38	1.06	-	0.8	-0.04
Transcript_contig_15363 (15363)	-	-	-	1.27	1.98	-	2.21	-	-	-	-
Transcript_contig_15822 (15822)	0.34	-	1.54	1.16	-	-1.06	1.56	-	-	-0.61	-0.99
Transcript_contig_15881 (15881)	1.12	-1.7	-	0.88	0.88	-0.41	1.84	-	-	-	-0.98
Transcript_contig_15995 (15995)	0.31	-	1.1	1.23	1.33	-	1.21	-	-	-	-1.12
Transcript_contig_16101 (16101)	-2.57	-	1.96	1.65	0.86	-0.42	-0.02	-	-	-	-2.0
Transcript_contig_16108 (16108)	-0.18	-	-	2.64	-	-	1.96	-	-	-	-
Transcript_contig_1616 (1616)	-	-	-	1.46	-	1.16	-	-	-	-	2.59
Transcript_contig_17376 (17376)	-0.85	-	-	1.87	1.59	0.52	0.71	-	-	-0.48	-
Transcript_contig_17912 (17912)	-	-	-	1.7	1.42	0.4	-	-	-	0.35	1.31
Transcript_contig_1804 (1804)	0.61	-0.35	0.86	1.11	-0.5	0.94	0.57	-0.72	-	-	-
Transcript_contig_18110 (18110)	-	-	1.67	1.44	1.48	-	0.64	-	-	-	-0.43
Transcript_contig_18179 (18179)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_18405 (18405)	-	-	1.31	2.82	-	-	0.55	-	-	-	-
Transcript_contig_18589 (18589)	0.31	-	-	2.35	-	-	-0.24	1.53	-	-	-0.12
Transcript_contig_18605 (18605)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_18959 (18959)	-0.98	0.5	0.79	-	0.6	0.19	1.05	-0.2	0.81	-	-
Transcript_contig_19398 (19398)	-	-	-	2.6	-	2.3	-	-	-	-	-
Transcript_contig_20030 (20030)	0.34	-	-	2.06	-	0.65	2.0	-	-	-	-
Transcript_contig_20667 (20667)	-0.08	-	1.37	1.64	-	-0.54	1.87	-	-	-	-
Transcript_contig_20744 (20744)	-0.23	-1.14	-	1.17	-0.09	-0.14	1.0	-0.31	0.7	-0.62	-0.95
Transcript_contig_21024 (21024)	-	-	-	-	-	1.86	2.62	-	-	-	0.28
Transcript_contig_214 (214)	-	-	2.06	1.57	-	0.27	1.41	-	-	-	-
Transcript_contig_21461 (21461)	-	-	1.92	1.43	1.8	-1.33	-1.3	-	-	-	-2.17
Transcript_contig_22821 (22821)	-	-	-	3.22	-	-	0.73	-	-	-	-
Transcript_contig_2324 (2324)	-	-	-	2.59	-0.35	0.21	0.82	-	-	-	0.37
Transcript_contig_23297 (23297)	-	-	-	2.83	1.96	-	-	-	-	-	-
Transcript_contig_23625 (23625)	-	-	-	2.17	2.7	-	-	-	-	-	-
Transcript_contig_23744 (23744)	-	-	-	0.74	1.45	-	0.57	-	-	0.38	1.93
Transcript_contig_23965 (23965)	-0.82	-0.82	-	2.36	-	-	0.87	1.54	-	-	-
Transcript_contig_24682 (24682)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_24694 (24694)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_26971 (26971)	-1.36	0.78	0.98	1.5	-	-	1.07	1.0	-	-	-
Transcript_contig_27416 (27416)	-	-	-	2.59	-	-	2.32	-	-	-	-
Transcript_contig_2788 (2788)	0.61	0.47	-1.01	1.43	-0.78	-0.85	1.47	0.0	-	-	-
Transcript_contig_291 (291)	0.33	-	-	2.53	-	-	1.99	-	-	-	-
Transcript_contig_29328 (29328)	-3.04	-	1.75	1.64	1.33	-1.25	0.08	-	-	-2.69	-1.98
Transcript_contig_29685 (29685)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_3271 (3271)	-1.89	-	1.13	1.27	1.32	-1.36	1.31	-	-1.24	-1.95	-3.56
Transcript_contig_32779 (32779)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_33157 (33157)	-	-	-	2.64	-	-	-	-	-	-	2.25
Transcript_contig_3317 (3317)	-	-	2.33	-	1.97	-	1.04	-	-	-	-
Transcript_contig_34158 (34158)	-	-	1.06	1.57	1.28	1.82	-	-	-	-	-
Transcript_contig_36081 (36081)	-0.04	-1.26	-0.26	1.96	-	-2.05	0.42	-0.25	-	0.48	0.11
Transcript_contig_3688 (3688)	-0.15	-1.26	-1.74	2.0	0.07	-2.53	-	-	-	1.45	0.51
Transcript_contig_37469 (37469)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_3808 (3808)	-4.48	-	1.39	1.25	0.61	-0.96	-0.58	-	0.82	-0.24	-0.66
Transcript_contig_3813 (3813)	-0.93	-3.17	1.54	0.76	1.25	-1.83	0.83	-1.84	-	-0.88	-1.01
Transcript_contig_3842 (3842)	-1.02	-	1.18	1.28	1.41	-	1.34	-	-	-	-0.7
Transcript_contig_3909 (3909)	-	-	-	2.31	-	2.0	1.03	-	-	-	-
Transcript_contig_4149 (4149)	0.01	1.08	-	2.12	-	1.08	-0.37	-	-	-	-0.6
Transcript_contig_4390 (4390)	-	-	-	1.95	0.4	0.34	-0.26	-	-	1.58	-0.46
Transcript_contig_4717 (4717)	-	-	1.3	2.21	0.52	-	1.31	-	-	-	-
Transcript_contig_5031 (5031)	-0.53	-	-	2.47	-	-0.12	1.94	-	-	-	-
Transcript_contig_5126 (5126)	-0.43	-	1.04	1.34	0.0	1.07	1.06	-	-	-1.85	-2.3
Transcript_contig_54445 (54445)	-0.84	-1.19	1.2	0.99	0.91	-0.91	-0.05	-1.35	-0.2	-0.8	-1.0
Transcript_contig_5540 (5540)	-2.51	-	1.7	2.17	0.59	-2.36	0.45	-	-	-	-
Transcript_contig_5927 (5927)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_59965 (59965)	0.78	-	-1.08	1.02	-	0.13	1.9	-	-	-0.02	-0.05
Transcript_contig_60060 (60060)	-0.13	-0.19	-	2.7	-	-	1.43	-	-	-	-
Transcript_contig_60085 (60085)	0.3	0.38	-	1.56	-0.53	-0.55	1.36	0.25	-	-	-1.4
Transcript_contig_60241 (60241)	-	-	-	2.54	-	-	2.37	-	-	-	-
Transcript_contig_60247 (60247)	-0.31	-	-	2.73	1.12	-	0.46	-	-	-	-
Transcript_contig_60486 (60486)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_60632 (60632)	0.82	0.3	-	2.12	1.25	-	0.37	-	-	-	-
Transcript_contig_60681 (60681)	0.67	-0.26	0.87	1.6	-2.36	0.93	0.68	-	-	-	-
Transcript_contig_6074 (6074)	-1.25	-	-0.04	3.09	-	-	-	-	-	0.12	-
Transcript_contig_60839 (60839)	-	-	1.92	-	2.15	-	1.48	-	-	-	-
Transcript_contig_60876 (60876)	-0.22	-	1.72	1.72	-0.37	-	1.47	-	-	-	-
Transcript_contig_61087 (61087)	-	-	-	2.68	-	-	-	-	-	2.2	-
Transcript_contig_61138 (61138)	0.38	-	1.16	2.6	-	-	0.51	-	-	-	-
Transcript_contig_61149 (61149)	-	-	-	1.43	-	0.02	2.24	-	1.35	-	-
Transcript_contig_61187 (61187)	-	-	2.05	2.12	1.17	-5.81	-3.97	-3.01	-	-	-3.71
Transcript_contig_61430 (61430)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_61547 (61547)	-1.57	-	1.9	0.9	-1.66	0.57	1.37	-	-	-3.07	-0.79
Transcript_contig_61576 (61576)	-0.86	-	1.14	1.26	0.69	-0.65	0.83	-	-	0.1	-0.41
Transcript_contig_61599 (61599)	-0.68	-	-	2.96	-	-	0.82	-	-	-0.31	-
Transcript_contig_61926 (61926)	-	-	-	-	2.51	-	-	-	-	-	2.4
Transcript_contig_61989 (61989)	-0.45	-3.39	1.07	1.63	0.46	-0.31	1.0	-	-	-2.26	-0.77
Transcript_contig_62406 (62406)	1.67	-	-	2.97	-	-	-	-	-	-	-
Transcript_contig_62426 (62426)	0.03	-	-	2.85	-	0.34	0.58	-	-	-	-
Transcript_contig_62761 (62761)	-	-	2.34	-	2.57	-	-	-	-	-	-
Transcript_contig_63214 (63214)	-1.2	-0.72	-	1.01	-0.76	0.22	1.57	-	-	1.17	-0.04
Transcript_contig_63290 (63290)	-	-	-	2.3	2.01	-	1.03	-	-	-	-
Transcript_contig_63416 (63416)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_6356 (6356)	-2.24	-2.24	-	0.15	-	1.22	1.16	0.12	1.55	-1.74	-0.77
Transcript_contig_64101 (64101)	-0.79	0.74	0.56	1.07	1.78	-	0.8	-	-	-	-
Transcript_contig_64303 (64303)	0.38	-	0.07	1.17	0.81	-1.94	1.9	-	-	-1.04	-2.62
Transcript_contig_64537 (64537)	2.06	-	-	2.77	-	-	-	-	-	-	-
Transcript_contig_64564 (64564)	-	-	1.65	1.42	1.14	-1.46	0.73	-	-	-0.06	-
Transcript_contig_64649 (64649)	-	-	-	2.63	-	-	-	-	-	2.27	-
Transcript_contig_64654 (64654)	-	-	0.95	0.46	-	-	1.58	-	1.39	0.04	0.07
Transcript_contig_64705 (64705)	-	-	-	2.59	-	-	2.32	-	-	-	-
Transcript_contig_64879 (64879)	1.42	1.29	-	1.2	-	-0.69	1.25	-	-	-	-0.78
Transcript_contig_64882 (64882)	-1.33	-1.48	0.33	2.2	-1.44	-2.46	1.86	-	-	-	-2.3
Transcript_contig_64927 (64927)	-	-	-	1.87	-	-	2.18	-	-	-	1.48
Transcript_contig_65022 (65022)	1.61	-0.85	-	1.62	-	-1.22	1.96	-	-	-	-
Transcript_contig_65059 (65059)	-	-	-	2.6	-	2.3	-	-	-	-	-
Transcript_contig_65459 (65459)	-0.15	-0.32	-	1.74	-1.53	0.62	1.48	-	-	-2.61	0.16
Transcript_contig_66374 (66374)	-	-	-	0.9	1.71	-0.16	1.28	-	1.34	-	-
Transcript_contig_66601 (66601)	-	-	0.83	2.54	1.06	-	0.4	-	-	-	-
Transcript_contig_66663 (66663)	-	0.46	0.73	1.57	0.55	-1.06	1.15	-0.26	-	-	-
Transcript_contig_66801 (66801)	-	-	-	1.94	-	-	2.84	-	-	-	-
Transcript_contig_66888 (66888)	-0.36	-3.06	1.84	0.18	-0.89	-0.31	0.99	-1.32	-0.89	-0.3	-1.67
Transcript_contig_67413 (67413)	-	-	1.0	3.17	-	-	-	-	-	-	-
Transcript_contig_6766 (6766)	-	-	-	2.89	-	-	1.85	-	-	-	-
Transcript_contig_67709 (67709)	-0.86	-	1.24	1.32	-0.59	0.08	1.42	-	-	-1.41	-0.31
Transcript_contig_67883 (67883)	-0.35	-	-	1.48	0.51	0.35	2.03	-	-	-	-0.63
Transcript_contig_68025 (68025)	-2.09	-2.25	1.69	2.51	-0.66	-	-0.54	-	-	-1.74	-
Transcript_contig_68103 (68103)	-1.19	-0.31	1.1	1.01	0.0	-	0.62	0.79	-	-0.13	-1.21
Transcript_contig_68136 (68136)	-0.35	-	1.17	1.19	1.89	-	-0.06	-	-	0.02	-
Transcript_contig_68228 (68228)	-	-	-	1.94	-	-	1.0	-	1.87	0.59	-
Transcript_contig_68310 (68310)	0.7	0.26	0.74	0.26	-2.62	0.24	1.38	-0.25	-	-3.82	-1.16
Transcript_contig_68395 (68395)	-	-	-	3.46	-	-	-	-	-	-	-
Transcript_contig_68494 (68494)	-1.46	-1.28	1.21	0.84	0.94	-0.58	-0.05	-0.6	0.38	-1.82	-1.67
Transcript_contig_6852 (6852)	1.47	0.4	-	2.26	-	-	1.09	-	-	-	-
Transcript_contig_69615 (69615)	-	-	-	2.06	2.77	-	-	-	-	-	-
Transcript_contig_69839 (69839)	-2.84	-	1.54	0.95	1.46	-1.16	-1.26	-	0.45	-0.9	-0.99
Transcript_contig_69887 (69887)	0.08	-	-	3.06	-	-	-	-	-	-	0.65
Transcript_contig_699 (699)	-2.08	-	0.71	1.95	-0.65	0.74	1.15	-	-0.44	-	-
Transcript_contig_69905 (69905)	-4.22	-11.44	1.86	1.25	1.7	-1.59	-0.74	-9.7	-1.38	-2.63	-2.31
Transcript_contig_70395 (70395)	-0.3	-0.48	0.95	0.88	1.4	0.16	0.95	-	-	-	-
Transcript_contig_70990 (70990)	-1.94	-	-0.73	1.98	1.61	0.06	1.07	-	-	-	-
Transcript_contig_7109 (7109)	2.06	-	-	2.77	-	-	-	-	-	-	-
Transcript_contig_71544 (71544)	-	-	-0.03	1.69	0.2	-0.82	0.95	-	-	1.1	-0.01
Transcript_contig_7158 (7158)	-2.38	-	1.32	1.35	0.4	-0.76	1.26	-	-0.74	-	-0.23
Transcript_contig_72151 (72151)	-2.62	-	1.76	1.82	0.03	-1.25	0.55	-	0.03	-	-
Transcript_contig_7237 (7237)	-0.33	-	-0.43	2.57	0.8	-	0.47	-	-	-1.27	-
Transcript_contig_72453 (72453)	-3.22	-0.42	-0.01	1.9	-0.57	-0.34	0.17	1.0	-	-0.54	-2.89
Transcript_contig_73991 (73991)	0.78	-0.78	1.18	1.44	-	-0.48	1.35	-	-	-1.58	-3.16
Transcript_contig_74933 (74933)	1.03	-	-	1.72	-	1.15	1.78	-	-	-	-
Transcript_contig_7522 (7522)	0.39	-0.15	1.17	1.51	-	-	1.89	-	-	-	-
Transcript_contig_76415 (76415)	-	-	2.23	2.32	0.41	-	-	-	-	-	-
Transcript_contig_7695 (7695)	-	-	1.93	1.44	2.16	-	-	-	-	-	-
Transcript_contig_79400 (79400)	-	-	-	3.04	-	-0.13	-	-	-	0.91	-
Transcript_contig_79610 (79610)	-1.71	-3.73	1.16	0.83	1.08	-0.15	0.98	-1.79	-1.95	-0.67	-1.16
Transcript_contig_79773 (79773)	1.29	0.43	-	1.2	-0.76	-1.78	0.78	1.02	-	-1.83	-
Transcript_contig_79885 (79885)	-	-	2.25	0.76	1.48	-	0.82	-	-	-	-
Transcript_contig_8012 (8012)	0.48	0.62	1.44	1.22	-	-	0.88	-	-	-1.73	-0.18
Transcript_contig_80395 (80395)	-3.45	-	1.84	1.47	0.39	-1.49	1.38	-	-	-	-1.88
Transcript_contig_80603 (80603)	-1.24	-	-	1.51	1.78	0.9	1.28	-	-	-	-
Transcript_contig_80764 (80764)	-	-	-	2.46	-	-	1.93	-	-	-	0.73
Transcript_contig_8086 (8086)	1.42	-	-	2.14	-	-	1.97	-	-	-	-
Transcript_contig_81146 (81146)	-2.25	-5.02	1.68	1.34	1.28	-0.41	0.01	-6.03	-3.2	-1.47	-1.54
Transcript_contig_8190 (8190)	-0.27	-0.27	-	2.18	1.3	1.24	-	-	-	-	-
Transcript_contig_82038 (82038)	0.5	-	1.29	2.08	0.93	-1.09	-0.95	-	-	-	-
Transcript_contig_82345 (82345)	-0.37	-0.7	1.06	1.17	-0.49	0.77	0.62	0.08	-	-	-1.92
Transcript_contig_82577 (82577)	0.69	-	1.31	1.75	-	0.25	0.65	-	-	-	-0.33
Transcript_contig_82683 (82683)	-	0.61	2.34	0.53	1.57	-	-	-	-	-	-
Transcript_contig_83198 (83198)	0.23	-1.97	1.05	0.97	0.45	0.17	1.35	-1.64	-	-	-2.53
Transcript_contig_83677 (83677)	-	-	2.61	-	0.84	-	1.18	-	-	-	-0.27
Transcript_contig_83722 (83722)	-0.48	-	-0.28	2.77	-	-	0.02	-	-	-	0.68
Transcript_contig_83770 (83770)	-	-	-	2.33	-	-	2.58	-	-	-	-
Transcript_contig_84525 (84525)	-0.71	-1.04	1.7	0.44	1.34	-	0.83	-	-	-0.0	-
Transcript_contig_85138 (85138)	-	-	-	2.64	-	-	-	-	-	-	2.25
Transcript_contig_8691 (8691)	-0.7	-0.24	-0.42	1.49	-0.2	-1.21	0.66	0.59	-	0.67	-
Transcript_contig_8987 (8987)	-0.18	-2.09	1.05	1.27	-	0.25	1.5	-1.26	-0.83	-	-1.32
Transcript_contig_90128 (90128)	-3.33	-12.58	1.94	1.16	1.4	-1.26	-0.75	-11.26	-1.05	-1.67	-1.39
Transcript_contig_90437 (90437)	-	-	1.37	2.47	-	-	-	-	-	-	1.52
Transcript_contig_9071 (9071)	1.09	0.88	-	0.68	-0.6	-	1.68	-	-	0.65	-
Transcript_contig_90920 (90920)	-0.84	-	0.85	2.05	0.59	-0.09	1.04	-	-	-	-
Transcript_contig_91070 (91070)	1.16	-	-	1.33	-	1.03	1.17	-	-	0.98	-
Transcript_contig_9131 (9131)	-	-	-	1.78	1.97	1.54	-0.43	-	-	-	-
Transcript_contig_9136 (9136)	-0.19	-	0.6	1.66	0.24	-0.83	1.22	-	-	-0.89	-0.28
Transcript_contig_9999 (9999)	-1.37	-4.05	0.95	0.93	1.42	-0.42	0.5	-3.29	-0.43	-0.92	-1.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.