Heatmap: Cluster_247 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_1221 (1221)	6.24	5.21	6.94	7.39	7.91	6.55	10.38	3.7	5.8	9.11	5.49
Transcript_contig_13233 (13233)	8.02	8.39	9.31	7.08	9.79	6.09	6.49	4.05	5.59	13.31	6.11
Transcript_contig_1344 (1344)	4.87	5.01	5.73	12.13	15.11	9.99	10.92	3.5	5.54	5.54	3.93
Transcript_contig_1894 (1894)	22.26	18.68	25.26	44.72	56.57	27.25	48.11	19.82	1.51	12.53	10.1
Transcript_contig_216 (216)	11.04	10.01	17.16	19.74	28.3	11.31	16.65	10.56	22.94	20.21	14.27
Transcript_contig_2372 (2372)	17.31	15.88	15.98	38.17	37.38	23.36	35.21	5.48	0.0	14.01	9.3
Transcript_contig_281 (281)	7.76	9.02	10.21	17.01	16.82	8.82	12.21	8.0	6.12	14.41	9.41
Transcript_contig_3353 (3353)	10.19	7.9	7.31	18.78	25.11	14.98	22.25	6.93	2.91	9.62	6.97
Transcript_contig_3759 (3759)	11.02	10.83	16.84	24.29	20.01	9.26	15.15	5.72	2.05	14.31	10.36
Transcript_contig_3872 (3872)	7.39	8.27	6.83	12.85	13.72	11.3	12.96	3.39	0.28	9.17	4.5
Transcript_contig_53858 (53858)	195.74	175.61	257.35	374.12	410.33	217.52	292.77	188.12	330.84	237.17	207.65
Transcript_contig_54169 (54169)	10.54	10.57	11.78	17.43	23.23	11.11	20.17	10.66	10.48	21.24	12.61
Transcript_contig_54453 (54453)	32.87	30.95	28.51	47.7	62.69	29.04	48.51	20.96	21.21	62.84	33.1
Transcript_contig_54613 (54613)	6.68	6.25	10.55	14.34	12.7	6.95	10.71	5.11	1.05	10.48	6.02
Transcript_contig_54634 (54634)	2.57	2.45	2.13	4.75	5.13	2.68	4.71	3.18	3.81	3.35	2.44
Transcript_contig_54818 (54818)	18.46	19.53	14.78	24.48	17.04	14.97	28.93	20.99	3.71	8.46	7.38
Transcript_contig_54864 (54864)	6.2	6.64	7.25	9.45	11.81	4.8	8.16	5.6	4.14	9.52	5.36
Transcript_contig_54882 (54882)	45.28	38.73	44.17	87.59	113.43	75.52	93.82	54.5	39.22	46.59	26.66
Transcript_contig_55125 (55125)	9.45	10.05	11.06	14.28	15.44	7.24	10.81	8.45	4.77	9.77	6.76
Transcript_contig_55218 (55218)	4.62	4.24	4.8	7.76	6.78	6.36	7.11	2.51	1.72	6.43	3.72
Transcript_contig_55508 (55508)	7.31	6.83	4.79	8.61	6.06	6.2	9.96	4.43	1.68	7.0	5.42
Transcript_contig_55757 (55757)	7.5	7.96	8.9	12.21	12.34	5.99	9.22	5.76	4.33	12.45	7.33
Transcript_contig_55801 (55801)	13.86	11.09	17.43	22.82	26.91	13.67	25.78	5.16	9.83	21.53	14.2
Transcript_contig_55809 (55809)	21.68	19.95	15.53	38.33	52.98	37.55	53.27	14.88	9.63	22.76	14.06
Transcript_contig_55958 (55958)	20.52	19.04	16.99	27.84	36.49	16.49	26.62	20.44	11.52	14.53	7.93
Transcript_contig_56005 (56005)	6.76	5.9	4.47	6.64	8.86	4.12	7.08	4.6	5.12	9.38	6.2
Transcript_contig_56201 (56201)	23.07	19.47	9.37	46.95	50.26	27.9	48.38	10.07	1.82	32.72	20.29
Transcript_contig_56818 (56818)	6.54	7.29	6.35	9.78	13.67	8.03	8.27	5.99	4.79	12.55	7.31
Transcript_contig_56839 (56839)	10.92	12.24	7.04	14.44	20.37	10.07	16.25	7.43	5.28	17.04	10.09
Transcript_contig_56845 (56845)	2.19	2.22	1.02	1.91	3.21	1.93	2.56	1.37	0.21	2.57	1.59
Transcript_contig_56961 (56961)	10.69	7.92	11.46	20.34	31.61	11.78	16.94	7.95	22.91	15.69	10.41
Transcript_contig_56970 (56970)	16.2	18.08	13.34	32.9	36.96	22.63	26.25	15.62	6.52	30.67	19.6
Transcript_contig_57049 (57049)	22.66	23.22	23.68	35.44	41.85	32.0	33.97	13.79	4.73	36.24	19.59
Transcript_contig_571 (571)	3.6	3.23	4.45	3.95	4.9	2.46	4.66	1.66	1.93	5.52	2.87
Transcript_contig_57454 (57454)	12.59	11.92	14.79	14.64	17.47	9.75	18.21	13.74	5.82	14.92	9.74
Transcript_contig_57616 (57616)	12.47	12.03	6.97	14.62	18.05	11.17	19.79	10.57	5.51	13.46	8.38
Transcript_contig_57688 (57688)	5.61	4.81	6.75	7.97	7.76	4.97	7.69	1.95	7.01	10.86	7.34
Transcript_contig_57927 (57927)	9.94	10.73	15.76	18.16	34.06	15.03	20.59	7.29	10.45	7.26	6.5
Transcript_contig_58058 (58058)	10.08	10.05	12.89	14.91	17.97	10.94	14.14	7.61	15.38	12.75	8.64
Transcript_contig_59153 (59153)	2.41	2.27	2.98	4.26	5.57	2.03	4.18	2.09	0.77	3.7	2.1
Transcript_contig_61210 (61210)	24.82	22.09	28.83	39.69	45.57	23.25	41.95	17.74	22.8	34.74	19.99
Transcript_contig_66206 (66206)	11.48	9.0	8.16	11.23	5.66	8.12	9.11	8.11	13.03	12.13	8.21
Transcript_contig_68950 (68950)	11.41	11.25	7.9	14.2	20.05	10.84	13.94	10.4	7.95	15.6	9.68
Transcript_contig_71263 (71263)	20.4	16.04	11.17	33.35	39.02	18.67	35.47	11.71	13.94	25.79	17.05
Transcript_contig_78070 (78070)	9.32	7.83	11.8	15.41	17.18	9.28	13.56	5.74	7.31	15.36	10.7
Transcript_contig_78180 (78180)	6.77	6.04	6.93	11.03	9.75	6.78	8.79	3.83	2.18	8.41	5.57
Transcript_contig_78379 (78379)	17.58	14.89	21.03	25.57	25.1	17.26	23.97	11.32	15.97	24.52	16.99
Transcript_contig_78540 (78540)	8.64	5.4	8.8	11.82	11.86	7.73	14.33	4.45	3.91	14.66	9.58
Transcript_contig_79063 (79063)	7.34	7.26	7.56	11.4	12.61	7.15	8.86	6.37	0.73	6.9	4.18
Transcript_contig_79599 (79599)	3.54	4.93	5.16	4.89	4.41	3.62	5.92	5.2	0.21	4.98	3.73
Transcript_contig_80172 (80172)	116.76	95.24	157.28	271.02	234.72	171.83	179.86	86.12	102.16	160.53	113.24
Transcript_contig_80399 (80399)	17.37	15.81	9.03	19.81	24.72	14.22	21.38	11.61	5.69	8.96	6.96
Transcript_contig_80995 (80995)	8.76	7.65	5.98	12.81	18.61	12.72	10.19	9.64	7.36	17.96	9.34
Transcript_contig_81951 (81951)	9.05	7.76	8.11	11.86	15.08	7.19	11.63	7.75	4.47	7.25	5.57
Transcript_contig_82101 (82101)	8.58	5.76	9.06	15.27	12.05	7.04	12.03	4.21	0.63	10.7	6.86
Transcript_contig_82116 (82116)	3.9	4.25	4.82	7.74	8.53	2.45	4.52	4.9	1.7	5.18	3.68
Transcript_contig_89508 (89508)	5.66	4.19	6.52	8.31	8.26	5.66	7.73	2.48	1.69	9.78	6.19
Transcript_contig_89774 (89774)	5.28	4.32	3.9	6.08	6.1	4.49	8.81	3.04	0.65	7.76	4.55
Transcript_contig_917 (917)	5.21	5.45	6.59	7.56	10.72	3.07	5.4	4.31	3.04	8.25	6.1

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)