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Heatmap: Cluster_281 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000093.236 (tig00000093_g3662.t1)
 -0.75 -3.1 -3.55 -2.21 -1.59 0.76 0.85 -2.63 0.84 -1.33 -2.3 -1.5 -2.05 1.25 -0.94 0.18 -2.26 1.27 -0.17 0.2 1.05 -1.46 2.29 0.49 -1.38 -2.25
Cpa|evm.model.tig00000093.237 (tig00000093_g3662.t1)
 -0.86 -2.78 -3.42 -1.98 -1.14 1.25 1.7 -1.75 1.15 -1.49 -1.2 -0.81 -0.57 0.96 -0.91 -0.52 -2.38 0.8 -0.56 -0.61 1.01 -2.24 2.0 0.09 -2.29 -1.34
Cpa|evm.model.tig00000093.238 (tig00000093_g3662.t1)
 -1.03 -2.24 -2.2 -1.39 -1.14 1.5 1.25 -1.3 1.22 -1.63 -1.2 -1.49 -0.92 1.09 -0.87 -0.32 -2.36 0.24 0.15 -0.2 0.44 -1.75 2.13 0.42 -3.21 -1.45

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.