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Heatmap: Cluster_297 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00001025.11 (tig00001025_g6367.t1)
 -2.42 - -0.88 -2.16 -1.41 -0.43 -0.05 -0.04 1.14 0.6 1.02 0.58 -1.72 0.02 -2.36 -0.09 -0.48 0.55 1.2 -0.78 - -2.51 1.98 0.35 0.42 -1.03
Cpa|evm.model.tig00020927.9 (tig00020927_g15938.t1)
 -0.86 -0.45 -0.68 -0.03 -0.09 1.02 0.83 0.65 0.68 -0.4 0.45 0.91 -0.66 -0.82 -1.18 -1.16 -1.37 -0.29 0.43 -0.52 -0.98 -0.14 1.49 -1.8 -0.73 -0.46
Cpa|evm.model.tig00020934.36 (tig00020934_g16104.t1)
 -2.24 -0.77 -0.14 0.38 0.65 0.91 0.74 0.09 -0.03 0.75 0.46 0.33 - -1.45 -1.7 -2.15 -1.36 0.57 -0.3 -1.88 -0.17 0.48 1.9 -0.63 -2.7 -0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.