Heatmap: Cluster_4 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
LS-2,Log,Min. medium,26C,pH7.5
NIES-2168,Log,Glucose,27C,pH6.6
UTEX1230,Log,Acetate,25C,pH7.5
UTEX1230,Log,Min. medium,25C,pH7.5
UTEX1602
UTEX1602,Log,Freshwater,22C,pH5.7
UTEX1602,Log,Freshwater,22C,pH7.1
UTEX1602,Log,Freshwater,22C,pH7.6
UTEX2805
0.48 -0.95 -1.23 -0.54 1.92 -0.57 -0.59 -0.82 -1.82
-0.03 -0.93 - -1.3 1.87 0.48 0.15 -0.51 -2.1
0.96 -4.96 - -3.93 2.69 -2.04 -2.5 -3.74 -6.72
-0.15 -3.36 - -2.33 2.86 -1.43 -2.43 - -
- -22.5 -27.2 -27.28 3.17 - - - -
0.79 -6.42 - -4.39 2.79 -2.91 -3.16 -4.83 -
-0.12 -0.58 -0.72 0.1 1.44 0.17 -0.2 -0.58 -1.47
0.91 -1.15 -2.84 -1.86 2.22 -1.26 -0.99 -0.89 -2.95
0.43 -4.63 - -3.75 2.4 -0.54 -0.37 -1.09 -1.65
- - - - 3.17 - - - -
1.18 -4.76 -3.48 -2.63 2.53 -1.99 -2.3 -3.23 -3.41
-6.66 -0.77 -8.47 -7.6 2.99 -6.96 -1.26 -6.2 -7.53
0.04 -0.73 -0.77 -0.24 1.53 0.2 -0.18 -0.64 -1.43
0.22 -2.71 -4.73 -2.64 2.17 -0.04 -0.17 -0.3 -1.74
-0.27 -1.35 -2.58 -0.87 2.09 0.3 -0.16 -0.73 -3.65
- -1.02 - - 2.92 -2.01 -1.2 -2.1 -
-0.28 -1.07 -2.98 -0.65 2.07 0.15 -0.23 -0.73 -2.53
-0.26 -1.26 -3.41 -1.04 2.41 -0.64 -0.91 -0.86 -2.82
0.2 -0.93 -1.46 -0.18 1.86 -0.13 -0.42 -1.06 -1.66
-12.24 -10.44 -14.31 -10.38 2.92 -0.7 -1.43 -1.24 -13.44
-1.13 -1.63 - -0.62 2.06 0.55 0.11 -0.23 -
-0.93 -0.75 -2.22 -0.11 1.83 0.26 -0.14 -0.32 -1.84
-18.73 -2.5 -19.12 -1.81 2.71 -0.77 -0.64 -0.4 -16.31
0.33 -1.53 -2.17 -1.01 2.22 -0.77 -0.77 -1.26 -1.17
- - - - 2.65 -0.1 -0.15 -0.16 -
0.94 -1.77 -4.56 -1.58 1.89 -0.04 -0.38 -0.56 -1.78
0.82 -2.06 - -1.8 2.04 -0.08 -0.28 -0.74 -2.23
-0.21 -1.23 -0.64 -0.07 1.56 0.38 -0.05 -0.77 -1.64
0.45 -1.2 -1.99 -2.41 2.19 -0.84 -0.84 -0.57 -1.38
-1.15 -0.38 -2.71 -0.63 2.06 0.16 -0.28 -0.45 -2.97
-0.52 -0.77 -1.83 -0.46 1.83 0.36 -0.08 -0.41 -2.51
-0.39 -1.7 -2.22 -0.63 2.05 0.24 -0.05 -0.36 -5.91
- - -3.2 -1.24 2.97 -1.97 -1.85 -3.61 -
0.26 - - - 2.96 - - - -
0.63 -1.45 -3.53 -1.27 2.17 -0.51 -0.72 -0.95 -1.89
-0.77 -1.56 -3.21 -0.9 1.98 0.6 0.15 -0.43 -3.11
0.43 -4.0 - -3.56 2.61 -0.68 -1.21 -1.57 -
0.37 -1.7 -3.91 -1.93 2.56 -1.39 -1.57 -1.71 -2.86
0.46 -1.75 -0.19 -1.18 2.38 -2.03 -1.99 -2.01 -4.53
0.46 -0.75 -4.44 -2.28 2.6 -1.69 -2.42 -2.95 -3.66
1.11 -2.77 - -1.61 2.29 -0.66 -1.02 -1.46 -
0.49 -1.46 -2.5 -1.08 1.95 -0.02 -0.32 -0.6 -1.85
-0.33 -1.07 -5.38 -0.66 2.1 -0.0 -0.36 -0.87 -1.15
0.47 -4.17 -4.38 -2.48 2.52 -0.72 -0.98 -1.16 -5.47
0.78 -2.87 - -1.77 2.2 -0.06 -0.42 -0.86 -
0.62 -0.59 -1.17 -0.25 1.79 -0.79 -1.0 -1.02 -1.03
- -3.02 - -1.99 2.9 -1.19 -1.16 -1.8 -
0.65 -2.39 -3.07 -1.52 2.14 -0.24 -0.37 -0.56 -3.96
-0.32 -2.2 - -1.5 2.42 -0.06 -0.42 -0.84 -5.21
1.03 -3.79 - -1.91 2.52 -0.79 -1.84 -4.48 -
-0.05 -2.84 - -1.01 1.99 0.22 0.14 0.21 -
- - - - 2.96 -1.33 -2.33 - -0.74
-0.22 -1.24 -5.4 -0.64 1.98 0.26 -0.1 -0.15 -3.97
0.83 -2.93 - -1.9 2.34 -0.21 -0.77 -1.68 -
- - - -1.5 2.65 0.01 -0.22 -0.94 -
-0.47 -3.35 - -1.16 2.45 -0.09 -1.02 -0.8 -1.9
-0.12 -1.77 -1.25 -0.57 2.19 -0.01 -0.5 -1.37 -3.98
-1.91 -1.01 -3.4 -0.34 2.29 0.09 -0.42 -0.71 -4.64
0.61 -1.84 0.11 -0.97 2.35 -2.95 -3.0 -2.78 -3.05
-0.67 -2.46 - -1.26 2.42 0.03 -0.35 -0.67 -
0.98 -6.45 - -5.54 2.73 -2.58 -3.16 -4.09 -
0.16 -1.5 -2.48 -1.48 2.1 -0.18 -0.38 -1.18 -0.73
-0.43 -1.44 -4.83 -1.62 2.39 -0.17 -0.45 -0.71 -4.61
0.47 -6.13 -5.81 -4.54 2.86 -4.72 -3.5 -2.52 -8.31
- - - - 3.12 -2.83 -4.87 -2.65 -
-0.89 -1.67 - -0.52 2.09 0.38 -0.02 -0.23 -4.44
0.34 -1.24 -3.09 -1.78 2.09 -0.34 -0.52 -0.71 -0.91
-3.51 -3.96 -6.63 -5.64 3.1 -4.08 -4.23 -3.86 -4.59
1.13 -3.19 -5.34 -4.32 2.53 -1.45 -2.1 -2.87 -3.15
- - - - 2.93 -0.12 -1.12 - -
-0.03 -1.79 -2.18 -0.82 2.17 -0.53 -0.51 -0.79 -1.06
0.2 -2.5 0.24 -0.65 2.1 -1.03 -0.89 -1.05 -4.31
-9.81 -2.88 -6.14 -7.21 3.04 -1.49 -3.72 -2.38 -6.57
1.4 -3.18 - -2.18 2.4 -1.04 -1.96 -5.16 -
-0.28 -1.26 -3.06 -1.28 2.21 0.15 -0.3 -0.89 -2.77
-0.75 -2.3 - -1.35 2.6 -0.64 -0.9 -2.87 -1.21
0.8 -2.48 - -2.64 2.67 -1.8 -2.56 -4.34 -4.32
1.28 -4.49 -4.63 -4.44 2.61 -2.68 -3.64 -6.67 -3.3
-0.21 -0.65 -1.02 -0.17 1.52 0.17 -0.06 -0.43 -1.21
0.05 -1.76 - -0.67 1.92 0.45 0.07 -0.52 -2.82
-0.93 -2.33 - -1.31 2.5 -0.08 -0.51 -1.19 -3.09
0.51 -2.81 - -2.03 2.5 -0.58 -0.9 -1.7 -
0.96 -2.84 -3.01 -1.45 1.89 -0.31 -0.26 -0.48 -1.53
- - - -3.68 3.15 - -5.2 - -
-0.26 -1.52 -5.92 0.04 2.12 0.19 -0.4 -1.03 -5.3
0.19 -2.49 -2.71 -1.6 2.59 -1.47 -1.38 -1.25 -
-0.63 -1.45 -5.22 -1.41 2.32 0.06 -0.32 -0.72 -2.82
-0.8 -1.32 -1.56 -0.72 2.1 0.24 -0.16 -0.63 -4.1
0.24 -3.97 - -2.94 2.16 0.49 -0.05 -0.33 -
0.65 -3.25 -3.38 -2.88 2.55 -0.96 -1.47 -2.6 -2.41
-0.05 -1.4 -0.32 -0.26 1.79 0.14 -0.47 -1.11 -1.86
1.1 -3.15 -4.92 -2.08 2.28 -0.62 -0.89 -1.22 -9.33
0.7 -2.46 - -5.36 2.38 -0.75 -0.61 -0.49 -
-2.88 -1.32 - -0.63 2.1 0.74 0.19 -0.47 -
-4.65 -2.31 -5.26 -6.44 3.08 -19.99 -6.35 -2.44 -4.2
-0.02 - - - 2.67 -1.08 -0.82 -0.76 -
-1.95 -2.77 -0.73 -1.18 2.84 -4.15 -4.25 -6.15 -1.86
0.39 -2.8 -5.59 -3.52 2.51 -0.75 -0.98 -0.88 -3.39
0.71 -4.08 - -3.06 2.46 -0.3 -0.91 -1.52 -
0.25 -2.16 -4.09 -2.47 2.04 0.53 0.05 -0.61 -3.19
-0.63 -0.81 -3.11 -0.93 1.84 0.44 0.04 -0.25 -1.6
0.4 -2.89 - -1.9 2.06 0.32 0.02 -0.26 -
0.13 -3.46 - -2.31 2.6 -0.62 -0.96 -1.31 -
-1.02 -0.84 -5.29 -0.82 2.26 0.11 -0.27 -0.76 -4.3
-1.24 -2.21 - -1.28 2.63 -0.69 -0.75 -0.87 -6.87
-0.43 -1.14 -2.39 -0.71 1.85 0.39 0.05 -0.2 -2.51
-1.14 -1.47 -6.43 -0.56 2.14 0.48 -0.01 -0.73 -3.45
1.21 -2.98 - -2.41 2.38 -0.71 -1.38 -2.53 -
- - - - 3.17 - - - -
-0.14 -1.2 -4.45 -0.69 2.1 0.1 -0.26 -0.59 -2.95
-24.4 -25.33 -24.12 -24.74 3.17 -23.28 -23.48 -25.36 -24.68
-1.82 -2.44 - -1.3 2.54 -0.07 -0.46 -1.02 -2.72
-0.05 -2.05 -0.49 -0.7 2.26 -0.51 -1.09 -1.96 -1.99
- - - - 3.09 - -1.12 - -
-2.13 -6.13 -3.35 -1.09 2.92 -6.26 -7.79 -8.44 -0.75
-0.97 -4.89 - -4.36 3.06 -5.4 -6.19 -7.87 -
-0.38 -1.72 -4.83 -0.9 2.18 0.26 -0.12 -0.91 -2.38
-0.93 -5.28 -2.0 -4.14 2.98 -5.95 -3.38 -3.79 -3.81
1.19 -3.51 -3.98 -2.77 2.44 -1.61 -1.9 -1.91 -2.78
0.31 -2.38 -3.94 -3.04 2.55 -0.96 -1.18 -1.4 -2.47
-0.26 -0.73 -1.27 -0.49 1.75 0.16 -0.06 -0.4 -2.15
-0.2 -1.58 -1.46 -0.35 2.56 -2.14 -2.12 -2.09 -4.67
-0.83 -2.39 - -1.55 2.53 -0.26 -0.55 -0.68 -
-0.01 -3.02 - -2.3 2.51 -0.23 -0.59 -1.11 -
-0.23 -0.73 -1.26 -0.63 1.8 -0.21 -0.36 -0.35 -0.85
-1.07 -1.65 - -0.67 2.34 0.26 -0.27 -1.0 -
-1.07 -1.65 - -0.67 2.34 0.26 -0.27 -1.0 -
0.79 -2.05 -6.34 -1.25 1.96 0.2 -0.18 -0.63 -5.93
0.44 -1.79 -6.62 -1.15 2.02 0.09 -0.25 -0.59 -1.84
0.11 -2.92 - -1.7 2.4 0.24 -0.46 -1.82 -
0.79 -2.21 - -1.24 2.11 0.27 -0.37 -1.57 -
- - - - 2.91 - -1.04 0.03 -
1.01 -1.01 -3.13 -1.39 1.83 -0.46 -0.67 -0.97 -0.77
-0.1 -2.3 -24.62 -1.11 2.3 0.32 -0.29 -1.29 -21.96
-0.46 -0.83 -0.95 -0.07 1.72 0.17 -0.17 -0.43 -2.5
0.57 - - -1.61 2.67 - -2.63 -0.58 -
- -2.88 - -1.85 2.6 0.05 -0.41 -0.44 -
- - - - 3.17 - - - -
0.21 -3.0 - - 2.61 -0.61 -0.57 -1.78 -
1.38 -4.83 - -3.8 2.43 -0.77 -1.86 -4.61 -
-0.96 -0.61 -1.79 0.15 1.75 0.31 -0.0 -0.54 -2.83
- - - - 3.13 - -2.08 - -
- - - - 3.08 - - -0.9 -
-1.06 -1.14 -2.41 -0.64 2.09 0.24 -0.05 -0.61 -2.55
0.06 -2.68 - -1.81 2.2 0.29 -0.18 -1.07 -1.54
-0.18 -0.95 -1.05 -0.32 1.86 0.05 -0.27 -0.51 -2.97
- -1.35 -20.79 -0.82 2.5 0.1 -0.33 -0.98 -6.21
-0.27 -0.88 -2.74 -0.58 1.96 0.26 -0.11 -0.68 -2.52
-0.19 -1.61 -4.12 -0.49 2.22 -0.12 -0.39 -0.89 -2.75
-0.12 -3.49 - -2.55 2.45 0.09 -0.39 -0.96 -
-0.59 -0.8 -1.63 -0.73 1.75 0.31 0.08 -0.37 -1.28
1.63 -8.1 -7.27 -7.09 2.51 -3.78 -4.13 -4.51 -7.06
0.61 -1.34 -2.23 -0.65 1.79 -0.21 -0.3 -0.57 -1.27
0.51 -1.96 -2.9 -1.27 2.45 -0.87 -1.37 -1.56 -4.49
1.25 -1.41 -4.18 -2.39 2.1 -1.44 -1.13 -1.35 -1.0
-2.06 -1.01 - -1.65 2.26 0.49 -0.04 -0.38 -
-0.14 -1.42 -4.01 -1.24 2.05 0.05 -0.07 -0.23 -2.01
-0.3 -0.9 -2.62 -0.77 1.78 0.36 0.09 -0.3 -1.69
-0.46 - - - 2.94 -1.83 -3.13 -2.45 -
-0.38 -0.67 -0.74 -0.18 1.55 0.27 -0.26 -0.29 -1.57
0.19 -3.05 - -2.1 2.02 0.6 0.18 -0.3 -
0.83 -1.1 -2.23 -1.71 2.06 -0.83 -0.74 -0.62 -2.04
-0.35 -1.6 -1.82 -0.88 1.95 0.38 -0.04 -0.59 -2.02
-0.37 -0.46 -1.79 -0.54 1.87 0.11 -0.25 -0.62 -1.73
0.39 -1.69 -9.28 -1.97 2.17 0.25 -0.24 -1.11 -3.08
0.39 -1.69 -9.28 -1.97 2.17 0.25 -0.24 -1.11 -3.08
1.0 -1.83 -3.47 -0.99 2.27 -0.56 -1.26 -2.24 -
0.45 -1.18 -0.91 -2.46 2.63 -4.01 -4.92 -4.66 -2.68
0.18 -6.49 - - 2.68 -2.14 -0.97 -0.48 -
- - - - 3.17 - - - -
-1.0 -6.2 - -4.59 2.95 -3.36 -1.96 -1.44 -
-1.68 -3.89 - -2.86 2.69 -0.12 -0.48 -1.3 -
0.21 - - - 2.75 -1.78 -2.12 -0.76 -
-0.28 -1.9 -1.12 -0.64 2.25 -0.3 -0.56 -0.91 -5.38
-0.72 -2.27 - -2.25 2.65 -0.41 -0.88 -1.32 -
0.9 -2.04 -2.23 -1.36 1.92 -0.23 -0.43 -0.63 -1.96
1.01 -3.03 -3.9 -2.47 2.45 -1.55 -1.47 -1.24 -5.64
1.0 -2.95 - -2.57 2.44 -0.71 -1.3 -2.98 -3.23
1.05 - - - 2.65 - -2.0 -1.35 -
-12.69 -2.53 - -1.46 2.76 -0.31 -1.08 -1.27 -
- - - - 3.08 -4.93 -5.12 - -0.99
-0.94 -1.54 -2.19 -0.49 1.88 0.45 0.18 -0.25 -2.38
-0.07 -2.05 - -1.25 1.97 0.39 0.19 -0.1 -3.5
0.27 -1.56 -2.63 -0.88 2.08 -0.0 -0.3 -0.95 -2.34
0.97 -2.9 - - 2.53 -1.48 -2.33 -0.8 -
-0.36 -1.34 -3.12 -0.78 1.91 0.54 0.07 -0.45 -3.01
- - - - 3.17 - - - -
1.07 -4.31 - -3.28 2.53 -1.14 -1.54 -2.62 -
-0.07 -3.1 - -1.81 2.49 0.09 -0.67 -1.63 -
-0.83 -2.2 -1.68 -1.01 2.27 -0.39 -0.33 -0.48 -1.68
-0.23 -1.27 - -0.34 2.16 0.06 -0.3 -0.68 -
-0.72 -2.08 -2.26 -1.59 2.65 -0.82 -1.19 -1.68 -5.05
-0.71 -3.91 - -2.3 2.42 0.05 -0.11 -0.34 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.