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Heatmap: Cluster_558 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
112-1,-N,48h
112-1,-N,72h
112-1,-P,48h
112-1,-P,72h
112-1,Control,48h
112-1,Control,72h
84A,MT-,F/2,18C
84A,MT-,Maribacter sp.,F/2,18C
84A,MT-,Roseovarius sp.,F/2,18C
85A,MT+
85A,MT+,-Si,24h
85A,MT+,100nM diproline
85A,MT+,1mM H2O2
85A,MT+,50uM decadienal,0.26% MeOH
85A,MT+,ASW,F/2,72h
85A,MT+,Cold,4C
85A,MT+,Heat,30C
85A,MT+,High light,30m
85A,MT+,High light,6h
85A,MT+,High salt
85A,MT+,Low salt
85B,MT-
85B,MT-,+SIP
PONTON36/34,Crossed strains,11h
PONTON36/34,Crossed strains,14h
PONTON36/34,Crossed strains,21h
PONTON36/34,Separate strains
Sro364_g127260.1 (Contig2146.g18077)
 - - - - - -1.39 0.32 -1.81 1.37 0.46 1.32 0.26 - -2.56 0.44 -3.72 1.41 - -2.44 - 1.64 0.28 0.93 0.51 0.83 1.23 0.27
Sro48_g028240.1 (Contig1255.g11719)
 - -1.12 -1.13 -3.98 -0.59 -0.5 -0.01 -0.68 1.37 0.15 0.84 0.2 0.45 -0.87 -0.13 -0.42 0.19 -0.49 -0.28 0.91 0.75 0.2 0.35 -0.39 0.19 0.28 0.06
Sro707_g190640.1 (Contig326.g4325)
 -4.41 - - - - 1.03 -0.66 -2.14 0.45 0.54 0.97 0.76 - -0.85 0.02 0.37 1.84 -3.45 -3.29 -3.28 1.66 -0.87 -0.22 0.58 0.28 0.93 0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.