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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cre02.g104050 (30785690) | - | - | - | - | - | - | - | - | -2.45 | - | - | - | - | -2.5 | -0.86 | 1.19 | 1.54 | 2.62 | 2.26 | 2.74 | 2.61 | 2.56 | 1.88 | 2.43 | 2.2 | 1.21 | 0.96 | -1.01 | - | - | - | - | - | - | - | -2.36 | -2.52 | -2.07 | -1.75 | -0.47 | -0.14 | - | -4.41 | -2.9 | -0.5 | -1.39 | -1.0 | -1.7 | - | -1.85 | -2.82 | - | - | - | -4.19 | -0.12 | 0.19 | 2.81 | 4.82 | - | - | - | -2.79 | -2.21 | - | -3.68 | - | - | - | -0.65 | -2.48 | - | - | -4.03 | - | -3.92 | -4.19 | -2.79 | - | - | - | -3.23 | -4.07 | - | - | -4.65 | 0.7 | -1.58 | -2.87 | - | -3.23 | -4.07 | -4.54 | -2.7 | - | - | -4.65 | 0.7 | -4.15 | -3.86 | -2.9 | - | -2.24 |
Cre03.g167778 (30787244) | -0.52 | -1.18 | -1.9 | -1.48 | -1.67 | 0.68 | 0.35 | 0.96 | 1.21 | 1.72 | 1.83 | 1.36 | 1.91 | 0.67 | 0.76 | 1.21 | 1.15 | 0.6 | 1.22 | 1.05 | 0.76 | 1.38 | 0.82 | 1.76 | 1.77 | 2.0 | 2.59 | 2.34 | - | - | - | - | - | -2.45 | -0.99 | -0.66 | -2.15 | -0.07 | -2.55 | -3.03 | -3.75 | -0.98 | -2.23 | -1.73 | -1.86 | -1.76 | -1.27 | -0.92 | 0.53 | 0.28 | -1.65 | -1.87 | -2.66 | -2.47 | -2.91 | -0.32 | 0.78 | 2.73 | 3.52 | -4.85 | - | - | - | - | - | - | - | -5.62 | - | -0.62 | -3.81 | -5.07 | -2.06 | - | - | - | - | -5.3 | - | - | - | 0.39 | -2.21 | -3.27 | -4.5 | -2.37 | -0.9 | -0.53 | 0.03 | -0.03 | 0.39 | -2.21 | -3.1 | -1.24 | -3.27 | -4.5 | -2.37 | -0.9 | -5.61 | -6.89 | -6.32 | - | -7.01 |
Cre03.g174525 (30786548) | 0.63 | 1.09 | 0.44 | -0.72 | -1.19 | -1.14 | -0.99 | -1.7 | -1.24 | -0.78 | -0.24 | -0.07 | 0.43 | 0.06 | -0.16 | 0.66 | 1.1 | 1.29 | 1.96 | 2.08 | 2.22 | 2.13 | 1.9 | 1.97 | 1.9 | 1.71 | 1.62 | 1.24 | -4.52 | -4.4 | -3.26 | -2.25 | -1.09 | -1.29 | -1.07 | -0.49 | -0.5 | -0.06 | 0.33 | -0.44 | -0.7 | -2.58 | -1.57 | -3.6 | -1.1 | -1.95 | -2.78 | -2.07 | -3.38 | -2.04 | -1.18 | -1.56 | -2.02 | -0.98 | -0.59 | 0.19 | 0.51 | 2.29 | 3.67 | -3.89 | -4.2 | -2.64 | -2.79 | -3.36 | -2.72 | -2.45 | -2.92 | -3.69 | -2.2 | -4.59 | -3.47 | -5.44 | -7.0 | -0.42 | -2.68 | -4.1 | -0.73 | -1.68 | -2.33 | -2.52 | -3.34 | -0.83 | -1.52 | -0.51 | -2.35 | -1.48 | 0.95 | -1.52 | -3.99 | -1.38 | -0.83 | -1.52 | -2.51 | -1.44 | -0.51 | -2.35 | -1.48 | 0.95 | -0.44 | -2.84 | -1.67 | -3.36 | -1.55 |
Cre11.g467713 (30775550) | 0.54 | 0.84 | 0.61 | 0.29 | -0.05 | 0.82 | -0.2 | -0.39 | -1.43 | -1.28 | 1.1 | 0.81 | 0.24 | 0.48 | 1.91 | 1.77 | 2.53 | 2.15 | 1.88 | 1.7 | 2.32 | 1.75 | 1.73 | 1.68 | 1.72 | 1.28 | 1.98 | 0.89 | - | - | - | - | - | - | -3.61 | - | -1.76 | -0.65 | -2.75 | -1.45 | -1.24 | -3.16 | -4.12 | -3.61 | -1.93 | -2.86 | -3.53 | -2.75 | -0.62 | -1.34 | -3.0 | -1.24 | -1.42 | -2.98 | -0.97 | -2.2 | -1.39 | 0.31 | 4.04 | - | -2.88 | -4.07 | - | - | -3.84 | -3.05 | -2.79 | -3.74 | -4.16 | -0.68 | -1.45 | -2.47 | -0.59 | -3.6 | -2.62 | -4.38 | - | -2.75 | - | - | -4.2 | -0.48 | -3.06 | -1.39 | -3.34 | -1.98 | 0.45 | - | -3.43 | -1.92 | -0.48 | -3.06 | -4.1 | -5.07 | -1.39 | -3.34 | -1.98 | 0.45 | -0.65 | -3.63 | -2.04 | -2.61 | -0.89 |
Cre12.g530950 (30793003) | 0.57 | 0.38 | 0.23 | 0.2 | 0.16 | 0.34 | 0.23 | 0.0 | -0.03 | -0.05 | -0.14 | -0.4 | -0.41 | -0.5 | -0.13 | 0.39 | 0.53 | 0.67 | 0.58 | 0.53 | 0.65 | 0.71 | 0.78 | 0.46 | 0.61 | 0.76 | 0.76 | 0.93 | -0.68 | -1.3 | -0.71 | 0.16 | 0.21 | -1.02 | -0.03 | 0.64 | 0.64 | 0.74 | 0.68 | 0.3 | 0.05 | -1.29 | -0.31 | -1.25 | 0.18 | 0.12 | -0.57 | -0.34 | -0.95 | -0.78 | -0.34 | -0.21 | -0.76 | -0.06 | 0.16 | 0.14 | 0.31 | 1.19 | 3.13 | -0.41 | -0.2 | -0.9 | -0.58 | -0.34 | -0.39 | -0.72 | -0.7 | -0.79 | -0.43 | -0.16 | -0.65 | -0.63 | -1.06 | -0.41 | -0.86 | -0.47 | -0.28 | -0.66 | -0.73 | -0.64 | -0.66 | -0.93 | -2.07 | -0.51 | -0.95 | -1.2 | -0.25 | -0.09 | -0.37 | -0.16 | -0.93 | -2.07 | -1.07 | -0.84 | -0.51 | -0.95 | -1.2 | -0.25 | -0.22 | -0.64 | -0.3 | -0.69 | -0.39 |
Cre16.g665328 (30777502) | 1.35 | -0.03 | -0.4 | -2.57 | -1.82 | -0.46 | -2.44 | -0.79 | -0.42 | -0.69 | -0.13 | -0.36 | 0.26 | 0.19 | 0.92 | 0.22 | 0.62 | 0.65 | 1.24 | 1.47 | 1.17 | 2.23 | 1.88 | 2.35 | 2.13 | 1.94 | 2.22 | 1.84 | -1.55 | - | - | - | - | -3.79 | -3.74 | - | -4.59 | -3.83 | -1.75 | - | -2.07 | -2.71 | -2.49 | -1.63 | -2.92 | -1.51 | -0.38 | -0.3 | -1.11 | -2.86 | 0.95 | 1.39 | 1.54 | 1.11 | 0.28 | 1.0 | 1.76 | 2.5 | 3.66 | -2.12 | -3.61 | -4.8 | - | - | - | - | -4.6 | - | -1.84 | -0.3 | -2.73 | -1.76 | - | -4.28 | -5.58 | - | -4.4 | -2.51 | - | -5.13 | -5.1 | -0.3 | -2.8 | -4.43 | -3.43 | -2.45 | 0.35 | - | - | - | -0.3 | -2.8 | -1.45 | -1.41 | -4.43 | -3.43 | -2.45 | 0.35 | -3.88 | -1.57 | -3.71 | -2.23 | -3.19 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.