Heatmap: Cluster_400 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
112-1,-N,48h
112-1,-N,72h
112-1,-P,48h
112-1,-P,72h
112-1,Control,48h
112-1,Control,72h
84A,MT-,F/2,18C
84A,MT-,Maribacter sp.,F/2,18C
84A,MT-,Roseovarius sp.,F/2,18C
85A,MT+
85A,MT+,-Si,24h
85A,MT+,100nM diproline
85A,MT+,1mM H2O2
85A,MT+,50uM decadienal,0.26% MeOH
85A,MT+,ASW,F/2,72h
85A,MT+,Cold,4C
85A,MT+,Heat,30C
85A,MT+,High light,30m
85A,MT+,High light,6h
85A,MT+,High salt
85A,MT+,Low salt
85B,MT-
85B,MT-,+SIP
PONTON36/34,Crossed strains,11h
PONTON36/34,Crossed strains,14h
PONTON36/34,Crossed strains,21h
PONTON36/34,Separate strains
Sro1255_g256490.1 (Contig3638.g28083)
-5.56 -1.49 -3.33 -3.66 -3.74 -0.13 -0.36 -1.14 -1.01 -0.02 1.77 -0.71 1.41 -1.8 1.18 1.24 1.55 -0.91 -1.55 1.44 -0.62 -1.91 -0.64 -2.11 -1.63 -1.56 1.13
Sro266_g103200.1 (Contig1823.g16051)
-5.89 -2.26 -3.55 -3.11 -4.32 -1.08 -1.53 -1.15 -0.62 0.42 1.43 0.28 2.09 0.97 0.11 -0.4 0.28 -1.19 -0.5 2.19 -1.12 -2.04 -2.66 -0.6 -0.83 -0.85 0.79
Sro6_g005370.1 (Contig175.g2042)
-2.31 -1.61 -1.86 -2.89 -3.03 -1.04 -0.89 -1.79 -1.21 0.47 1.63 0.9 1.44 -0.4 0.56 0.24 0.43 -1.43 -0.26 1.94 0.43 -1.08 -1.18 -1.3 -1.4 -0.43 0.64
Sro878_g214750.1 (Contig706.g8164)
-2.05 -1.07 -2.75 -1.75 -2.52 -0.72 -1.18 -0.69 -0.87 0.53 1.76 0.81 0.71 0.47 0.73 0.89 0.88 -1.31 -0.62 1.04 0.02 -2.01 -1.82 -0.84 -0.96 -0.86 1.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.