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Gene | WT,12hL12hD,Log,1h Dark | WT,12hL12hD,Log,1h Light | WT,12hL12hD,Log,1h Light d2 | WT,12hL12hD,Log,3h Dark | WT,12hL12hD,Log,3h Light | WT,12hL12hD,Log,5h Dark | WT,12hL12hD,Log,5h Light | WT,12hL12hD,Log,7h Dark | WT,12hL12hD,Log,7h Light | WT,12hL12hD,Log,9h Dark | WT,12hL12hD,Log,9h Light | WT,12hL12hD,Log,11h Dark | WT,12hL12hD,Log,11h Light |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497614.1_6567 (KAA8497614) | 27.1 | 23.46 | 26.47 | 34.43 | 25.02 | 16.33 | 45.29 | 15.43 | 37.25 | 20.67 | 31.92 | 13.72 | 36.37 |
lcl|VRMN01000001.1_cds_KAA8497727.1_6680 (KAA8497727) | 75.29 | 29.01 | 42.77 | 37.21 | 60.19 | 24.15 | 47.07 | 13.47 | 59.0 | 9.64 | 63.78 | 4.02 | 68.03 |
lcl|VRMN01000001.1_cds_KAA8497816.1_6769 (KAA8497816) | 18.46 | 33.29 | 38.92 | 15.61 | 24.19 | 12.63 | 24.79 | 10.52 | 31.47 | 13.42 | 34.13 | 7.94 | 34.65 |
lcl|VRMN01000001.1_cds_KAA8497870.1_6823 (KAA8497870) | 42.82 | 55.29 | 65.73 | 37.94 | 64.64 | 28.01 | 44.27 | 21.32 | 53.34 | 24.96 | 51.38 | 15.14 | 45.45 |
lcl|VRMN01000001.1_cds_KAA8497891.1_6844 (KAA8497891) | 5.89 | 8.51 | 7.5 | 6.23 | 10.22 | 6.48 | 12.16 | 4.34 | 10.47 | 4.68 | 10.04 | 3.08 | 9.16 |
lcl|VRMN01000001.1_cds_KAA8498075.1_7028 (KAA8498075) | 63.76 | 36.77 | 36.66 | 51.39 | 52.72 | 42.06 | 56.75 | 32.42 | 86.52 | 30.73 | 81.05 | 25.99 | 68.47 |
lcl|VRMN01000001.1_cds_KAA8498109.1_7062 (KAA8498109) | 308.0 | 274.55 | 276.92 | 241.62 | 275.27 | 183.42 | 187.87 | 95.5 | 266.19 | 138.71 | 221.61 | 92.31 | 294.47 |
lcl|VRMN01000001.1_cds_KAA8498611.1_7564 (KAA8498611) | 62.34 | 15.6 | 17.22 | 22.35 | 33.55 | 7.91 | 61.26 | 5.86 | 77.15 | 7.99 | 62.28 | 7.13 | 43.33 |
lcl|VRMN01000001.1_cds_KAA8498764.1_7717 (KAA8498764) | 100.0 | 53.57 | 72.86 | 82.24 | 60.09 | 40.69 | 88.68 | 31.29 | 78.88 | 48.3 | 97.26 | 23.53 | 76.52 |
lcl|VRMN01000001.1_cds_KAA8498902.1_7855 (KAA8498902) | 65.32 | 50.59 | 48.32 | 70.75 | 61.07 | 39.5 | 101.04 | 33.19 | 100.34 | 43.3 | 109.45 | 19.15 | 100.96 |
lcl|VRMN01000001.1_cds_KAA8498991.1_7944 (KAA8498991) | 49.3 | 41.51 | 62.26 | 44.01 | 43.02 | 32.41 | 44.01 | 20.36 | 43.19 | 27.11 | 45.09 | 18.34 | 51.65 |
lcl|VRMN01000001.1_cds_KAA8499300.1_8253 (KAA8499300) | 211.32 | 205.47 | 281.43 | 135.33 | 268.39 | 61.71 | 372.96 | 34.77 | 429.28 | 54.18 | 508.42 | 24.79 | 430.2 |
lcl|VRMN01000001.1_cds_KAA8499306.1_8259 (KAA8499306) | 15.74 | 9.87 | 8.13 | 14.48 | 9.3 | 13.15 | 9.66 | 9.87 | 10.04 | 8.02 | 13.24 | 4.99 | 18.4 |
lcl|VRMN01000001.1_cds_KAA8499308.1_8261 (KAA8499308) | 16.82 | 10.15 | 17.85 | 11.37 | 18.99 | 6.24 | 14.31 | 3.82 | 17.03 | 3.17 | 21.64 | 1.49 | 19.71 |
lcl|VRMN01000001.1_cds_KAA8499529.1_8482 (KAA8499529) | 94.74 | 46.29 | 49.62 | 62.63 | 62.32 | 34.15 | 77.81 | 24.9 | 101.76 | 25.66 | 115.2 | 11.25 | 95.65 |
lcl|VRMN01000001.1_cds_KAA8499634.1_8587 (KAA8499634) | 31.29 | 28.28 | 24.69 | 23.25 | 32.0 | 11.32 | 26.06 | 9.12 | 34.31 | 13.54 | 39.77 | 7.63 | 28.96 |
lcl|VRMN01000001.1_cds_KAA8499697.1_8650 (KAA8499697) | 48.92 | 56.3 | 53.93 | 58.41 | 52.78 | 60.73 | 57.05 | 55.07 | 61.73 | 49.06 | 60.48 | 44.96 | 69.75 |
lcl|VRMN01000001.1_cds_KAA8499776.1_8729 (KAA8499776) | 192.29 | 121.71 | 119.01 | 132.32 | 136.78 | 110.68 | 110.65 | 89.13 | 119.65 | 72.03 | 114.13 | 60.63 | 129.11 |
lcl|VRMN01000001.1_cds_KAA8499847.1_8800 (KAA8499847) | 9.85 | 10.97 | 20.6 | 9.73 | 14.5 | 3.24 | 32.9 | 2.15 | 34.21 | 1.67 | 45.69 | 0.4 | 29.87 |
lcl|VRMN01000001.1_cds_KAA8499956.1_8909 (KAA8499956) | 19.96 | 9.52 | 12.38 | 15.25 | 21.98 | 13.67 | 13.54 | 7.76 | 19.41 | 9.09 | 21.15 | 5.44 | 23.4 |
lcl|VRMN01000002.1_cds_KAA8496404.1_133 (KAA8496404) | 76.94 | 95.65 | 76.93 | 61.83 | 84.26 | 57.38 | 138.87 | 46.72 | 187.87 | 32.75 | 174.41 | 35.68 | 171.62 |
lcl|VRMN01000002.1_cds_KAA8496405.1_134 (KAA8496405) | 1119.69 | 501.56 | 432.05 | 619.95 | 328.25 | 309.99 | 1087.43 | 181.69 | 1817.89 | 199.54 | 2198.98 | 190.48 | 1573.76 |
lcl|VRMN01000002.1_cds_KAA8496896.1_625 (KAA8496896) | 128.38 | 151.03 | 151.0 | 110.62 | 135.8 | 94.72 | 124.42 | 73.44 | 126.31 | 69.06 | 136.95 | 50.82 | 144.23 |
lcl|VRMN01000002.1_cds_KAA8496989.1_718 (KAA8496989) | 20.95 | 12.45 | 10.58 | 11.54 | 20.0 | 6.62 | 29.48 | 3.69 | 42.67 | 4.5 | 41.36 | 1.94 | 27.13 |
lcl|VRMN01000002.1_cds_KAA8496990.1_719 (KAA8496990) | 131.79 | 74.94 | 67.05 | 75.32 | 105.28 | 40.96 | 135.4 | 25.28 | 196.5 | 23.22 | 186.45 | 12.26 | 133.27 |
lcl|VRMN01000002.1_cds_KAA8496999.1_728 (KAA8496999) | 45.5 | 28.95 | 32.78 | 23.47 | 41.03 | 11.98 | 50.45 | 7.99 | 63.06 | 7.15 | 51.92 | 5.3 | 43.46 |
lcl|VRMN01000002.1_cds_KAA8497074.1_803 (KAA8497074) | 7.61 | 12.38 | 11.42 | 7.12 | 12.61 | 5.72 | 14.22 | 4.3 | 13.51 | 5.1 | 12.66 | 2.12 | 12.04 |
lcl|VRMN01000002.1_cds_KAA8497182.1_911 (KAA8497182) | 38.76 | 30.78 | 34.67 | 30.62 | 27.62 | 15.8 | 34.95 | 9.01 | 39.34 | 14.24 | 44.9 | 5.9 | 38.92 |
lcl|VRMN01000002.1_cds_KAA8497330.1_1059 (KAA8497330) | 48.71 | 34.63 | 36.84 | 33.55 | 21.1 | 31.71 | 23.7 | 26.69 | 29.96 | 28.72 | 43.86 | 23.01 | 50.04 |
lcl|VRMN01000002.1_cds_KAA8497335.1_1064 (KAA8497335) | 134.88 | 81.28 | 93.89 | 93.81 | 79.02 | 56.5 | 114.46 | 38.78 | 106.6 | 46.14 | 116.29 | 24.65 | 94.23 |
lcl|VRMN01000002.1_cds_KAA8497439.1_1168 (KAA8497439) | 35.05 | 31.68 | 35.74 | 28.36 | 36.1 | 21.56 | 33.53 | 18.49 | 39.8 | 16.63 | 41.46 | 9.5 | 44.01 |
lcl|VRMN01000003.1_cds_KAA8495292.1_1290 (KAA8495292) | 43.77 | 39.81 | 43.32 | 40.19 | 38.93 | 36.1 | 41.0 | 31.37 | 49.25 | 29.6 | 45.97 | 20.1 | 44.56 |
lcl|VRMN01000003.1_cds_KAA8495341.1_1339 (KAA8495341) | 146.58 | 100.79 | 82.4 | 154.1 | 72.62 | 107.22 | 154.56 | 94.6 | 219.7 | 82.0 | 232.5 | 53.65 | 180.26 |
lcl|VRMN01000003.1_cds_KAA8495439.1_1437 (KAA8495439) | 24.75 | 32.44 | 32.01 | 19.47 | 30.11 | 17.82 | 26.44 | 12.68 | 32.71 | 11.59 | 32.72 | 6.42 | 34.12 |
lcl|VRMN01000003.1_cds_KAA8495705.1_1703 (KAA8495705) | 12.94 | 13.17 | 14.55 | 12.11 | 13.79 | 6.23 | 19.93 | 4.89 | 17.09 | 4.69 | 18.77 | 2.16 | 18.12 |
lcl|VRMN01000003.1_cds_KAA8495894.1_1892 (KAA8495894) | 180.64 | 166.76 | 166.56 | 126.33 | 180.15 | 78.8 | 255.82 | 47.4 | 341.05 | 31.08 | 310.83 | 15.46 | 279.42 |
lcl|VRMN01000003.1_cds_KAA8496115.1_2113 (KAA8496115) | 73.39 | 67.13 | 78.09 | 65.15 | 94.95 | 60.48 | 72.28 | 42.37 | 82.94 | 36.95 | 88.77 | 26.48 | 95.64 |
lcl|VRMN01000003.1_cds_KAA8496170.1_2168 (KAA8496170) | 298.38 | 191.16 | 245.36 | 206.33 | 138.98 | 83.48 | 266.73 | 53.94 | 235.66 | 85.73 | 334.08 | 26.84 | 239.66 |
lcl|VRMN01000003.1_cds_KAA8496219.1_2217 (KAA8496219) | 21.48 | 5.02 | 6.89 | 11.96 | 11.37 | 3.43 | 16.65 | 3.23 | 27.54 | 3.85 | 28.89 | 1.79 | 22.64 |
lcl|VRMN01000004.1_cds_KAA8494370.1_2900 (KAA8494370) | 43.92 | 29.14 | 35.92 | 43.24 | 41.49 | 28.53 | 51.11 | 19.78 | 39.47 | 35.26 | 52.39 | 16.25 | 42.47 |
lcl|VRMN01000004.1_cds_KAA8494459.1_2989 (KAA8494459) | 180.49 | 53.72 | 76.76 | 114.91 | 94.52 | 59.37 | 88.36 | 40.2 | 109.77 | 37.29 | 148.91 | 11.01 | 130.19 |
lcl|VRMN01000004.1_cds_KAA8494575.1_3105 (KAA8494575) | 38.53 | 26.35 | 26.81 | 27.72 | 27.72 | 20.38 | 30.38 | 13.58 | 30.79 | 14.59 | 30.18 | 9.71 | 29.38 |
lcl|VRMN01000004.1_cds_KAA8494633.1_3163 (KAA8494633) | 100.55 | 29.19 | 40.4 | 56.92 | 58.7 | 30.44 | 74.69 | 21.56 | 87.11 | 18.04 | 98.36 | 9.04 | 79.47 |
lcl|VRMN01000004.1_cds_KAA8494723.1_3253 (KAA8494723) | 114.77 | 148.08 | 192.03 | 99.78 | 129.63 | 62.47 | 138.84 | 52.84 | 115.12 | 64.77 | 136.88 | 38.37 | 119.39 |
lcl|VRMN01000004.1_cds_KAA8494742.1_3272 (KAA8494742) | 33.75 | 36.11 | 35.85 | 26.2 | 33.79 | 14.7 | 33.09 | 7.38 | 36.26 | 9.09 | 42.58 | 3.88 | 41.66 |
lcl|VRMN01000004.1_cds_KAA8494745.1_3275 (KAA8494745) | 9.02 | 4.38 | 5.79 | 5.53 | 7.95 | 2.92 | 6.24 | 2.07 | 8.55 | 1.58 | 8.37 | 2.09 | 7.82 |
lcl|VRMN01000004.1_cds_KAA8494883.1_3413 (KAA8494883) | 21.01 | 11.01 | 8.92 | 15.16 | 14.98 | 13.44 | 17.28 | 10.58 | 18.2 | 10.8 | 21.01 | 8.15 | 24.26 |
lcl|VRMN01000004.1_cds_KAA8494942.1_3472 (KAA8494942) | 11.56 | 10.51 | 10.41 | 11.22 | 12.08 | 9.03 | 13.24 | 5.9 | 13.92 | 7.18 | 13.18 | 4.99 | 12.3 |
lcl|VRMN01000004.1_cds_KAA8495133.1_3663 (KAA8495133) | 31.96 | 36.88 | 38.01 | 36.03 | 24.83 | 23.08 | 59.85 | 17.6 | 66.28 | 23.24 | 81.09 | 10.75 | 69.91 |
lcl|VRMN01000004.1_cds_KAA8495151.1_3681 (KAA8495151) | 41.89 | 32.61 | 29.49 | 37.87 | 33.7 | 22.71 | 45.63 | 15.85 | 39.47 | 20.72 | 44.24 | 10.55 | 43.78 |
lcl|VRMN01000005.1_cds_KAA8493954.1_3818 (KAA8493954) | 67.13 | 42.85 | 42.59 | 51.55 | 58.41 | 39.25 | 57.34 | 27.37 | 63.47 | 35.43 | 55.03 | 21.53 | 62.15 |
lcl|VRMN01000005.1_cds_KAA8493972.1_3836 (KAA8493972) | 40.43 | 43.5 | 41.72 | 24.56 | 42.17 | 20.76 | 41.76 | 16.5 | 47.77 | 12.81 | 41.09 | 9.13 | 45.27 |
lcl|VRMN01000006.1_cds_KAA8493838.1_4600 (KAA8493838) | 69.9 | 125.65 | 122.54 | 69.37 | 91.6 | 40.66 | 118.99 | 35.14 | 104.52 | 43.88 | 116.06 | 26.61 | 109.45 |
lcl|VRMN01000007.1_cds_KAA8493178.1_9479 (KAA8493178) | 12.98 | 6.68 | 8.22 | 7.75 | 8.02 | 4.65 | 7.58 | 3.47 | 10.08 | 3.68 | 12.32 | 1.86 | 12.64 |
lcl|VRMN01000007.1_cds_KAA8493237.1_9538 (KAA8493237) | 37.46 | 25.61 | 25.7 | 24.49 | 33.9 | 21.67 | 26.78 | 18.58 | 37.31 | 17.02 | 34.85 | 11.41 | 37.26 |
lcl|VRMN01000007.1_cds_KAA8493267.1_9568 (KAA8493267) | 25.19 | 24.46 | 23.93 | 20.15 | 26.31 | 14.08 | 26.79 | 10.17 | 30.39 | 13.41 | 29.97 | 8.85 | 30.83 |
lcl|VRMN01000007.1_cds_KAA8493316.1_9617 (KAA8493316) | 13.43 | 12.82 | 13.46 | 14.13 | 14.57 | 6.88 | 22.83 | 4.3 | 13.71 | 8.53 | 17.41 | 2.96 | 15.13 |
lcl|VRMN01000008.1_cds_KAA8492864.1_2600 (KAA8492864) | 71.68 | 73.21 | 82.82 | 68.01 | 97.74 | 50.02 | 122.98 | 43.29 | 169.25 | 37.07 | 177.14 | 20.55 | 116.92 |
lcl|VRMN01000008.1_cds_KAA8492908.1_2644 (KAA8492908) | 271.15 | 383.75 | 538.05 | 294.45 | 294.07 | 178.2 | 311.42 | 146.26 | 352.68 | 165.59 | 416.1 | 88.05 | 446.72 |
lcl|VRMN01000008.1_cds_KAA8493057.1_2793 (KAA8493057) | 58.23 | 41.34 | 54.84 | 56.67 | 46.58 | 36.35 | 64.43 | 26.46 | 64.06 | 43.63 | 81.79 | 18.91 | 73.33 |
lcl|VRMN01000009.1_cds_KAA8492402.1_9095 (KAA8492402) | 218.08 | 110.54 | 124.79 | 136.28 | 130.39 | 77.25 | 136.11 | 65.43 | 144.58 | 73.18 | 188.39 | 45.63 | 148.86 |
lcl|VRMN01000009.1_cds_KAA8492597.1_9290 (KAA8492597) | 170.82 | 96.49 | 95.51 | 103.23 | 107.6 | 63.94 | 88.85 | 53.16 | 86.73 | 64.71 | 91.41 | 64.53 | 80.19 |
lcl|VRMN01000010.1_cds_KAA8492260.1_5443 (KAA8492260) | 749.65 | 78.21 | 69.3 | 226.35 | 258.25 | 52.29 | 573.74 | 26.72 | 1134.85 | 76.91 | 1328.72 | 148.84 | 605.44 |
lcl|VRMN01000010.1_cds_KAA8492269.1_5452 (KAA8492269) | 110.53 | 90.9 | 94.92 | 72.85 | 106.7 | 43.3 | 97.77 | 21.29 | 115.25 | 14.95 | 107.09 | 8.33 | 105.7 |
lcl|VRMN01000011.1_cds_KAA8491739.1_4747 (KAA8491739) | 10.93 | 12.29 | 12.8 | 11.55 | 11.33 | 15.06 | 18.59 | 10.88 | 26.09 | 8.1 | 24.78 | 6.26 | 23.56 |
lcl|VRMN01000011.1_cds_KAA8491767.1_4775 (KAA8491767) | 414.63 | 185.47 | 210.24 | 264.27 | 315.25 | 153.93 | 404.41 | 98.25 | 481.76 | 78.65 | 536.87 | 56.03 | 357.31 |
lcl|VRMN01000011.1_cds_KAA8491831.1_4839 (KAA8491831) | 79.98 | 18.88 | 35.34 | 43.82 | 90.85 | 22.7 | 82.1 | 14.29 | 105.09 | 7.9 | 110.36 | 1.87 | 100.0 |
lcl|VRMN01000011.1_cds_KAA8491975.1_4983 (KAA8491975) | 27.35 | 23.94 | 24.69 | 25.34 | 27.33 | 15.2 | 25.35 | 13.36 | 29.65 | 13.02 | 32.9 | 7.98 | 33.28 |
lcl|VRMN01000011.1_cds_KAA8491976.1_4984 (KAA8491976) | 66.96 | 65.3 | 72.14 | 56.79 | 76.01 | 38.49 | 86.11 | 28.26 | 91.11 | 29.11 | 91.75 | 19.95 | 79.1 |
lcl|VRMN01000013.1_cds_KAA8491466.1_6276 (KAA8491466) | 15.73 | 9.63 | 11.34 | 10.25 | 6.66 | 4.96 | 6.81 | 4.42 | 10.94 | 3.62 | 16.46 | 1.85 | 16.37 |
lcl|VRMN01000013.1_cds_KAA8491500.1_6310 (KAA8491500) | 56.39 | 42.82 | 45.64 | 39.18 | 41.23 | 35.62 | 40.62 | 29.45 | 44.15 | 28.36 | 47.23 | 20.76 | 49.77 |
lcl|VRMN01000013.1_cds_KAA8491503.1_6313 (KAA8491503) | 20.19 | 10.77 | 10.81 | 14.14 | 20.46 | 10.61 | 18.25 | 8.52 | 17.23 | 7.95 | 22.68 | 5.72 | 19.65 |
lcl|VRMN01000013.1_cds_KAA8491515.1_6325 (KAA8491515) | 92.01 | 42.75 | 47.87 | 50.47 | 36.61 | 33.3 | 54.1 | 26.38 | 99.11 | 22.5 | 128.61 | 15.22 | 121.34 |
lcl|VRMN01000013.1_cds_KAA8491578.1_6388 (KAA8491578) | 7.15 | 4.84 | 7.49 | 5.51 | 11.25 | 3.42 | 8.92 | 3.05 | 11.53 | 3.17 | 11.52 | 1.86 | 10.19 |
lcl|VRMN01000016.1_cds_KAA8491055.1_9812 (KAA8491055) | 39.03 | 28.1 | 23.33 | 36.09 | 31.29 | 23.9 | 41.5 | 13.81 | 29.7 | 18.94 | 42.92 | 9.23 | 35.62 |
lcl|VRMN01000016.1_cds_KAA8491062.1_9819 (KAA8491062) | 1858.02 | 510.52 | 475.18 | 1397.18 | 590.51 | 494.95 | 1394.51 | 378.84 | 1893.16 | 757.92 | 2295.59 | 373.0 | 1357.28 |
lcl|VRMN01000016.1_cds_KAA8491067.1_9824 (KAA8491067) | 34.11 | 16.91 | 19.38 | 25.57 | 34.09 | 13.59 | 40.61 | 9.97 | 31.54 | 8.06 | 34.89 | 6.26 | 37.09 |
lcl|VRMN01000017.1_cds_KAA8490921.1_6124 (KAA8490921) | 34.02 | 25.49 | 30.21 | 21.57 | 31.92 | 12.99 | 29.03 | 11.33 | 31.31 | 15.5 | 31.81 | 9.96 | 24.01 |
lcl|VRMN01000018.1_cds_KAA8490856.1_5628 (KAA8490856) | 177.87 | 150.12 | 194.7 | 120.59 | 147.8 | 76.61 | 173.99 | 52.13 | 162.25 | 51.2 | 172.91 | 31.16 | 160.65 |
lcl|VRMN01000027.1_cds_KAA8490450.1_2881 (KAA8490450) | 103.74 | 103.53 | 114.92 | 97.16 | 144.54 | 49.22 | 130.37 | 30.32 | 139.07 | 42.63 | 157.16 | 13.11 | 142.88 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)