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Gene | WT,12hL12hD,Log,1h Dark | WT,12hL12hD,Log,1h Light | WT,12hL12hD,Log,1h Light d2 | WT,12hL12hD,Log,3h Dark | WT,12hL12hD,Log,3h Light | WT,12hL12hD,Log,5h Dark | WT,12hL12hD,Log,5h Light | WT,12hL12hD,Log,7h Dark | WT,12hL12hD,Log,7h Light | WT,12hL12hD,Log,9h Dark | WT,12hL12hD,Log,9h Light | WT,12hL12hD,Log,11h Dark | WT,12hL12hD,Log,11h Light |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497661.1_6614 (KAA8497661) | 53.17 | 44.01 | 30.82 | 47.93 | 21.33 | 49.2 | 22.51 | 53.05 | 36.97 | 50.39 | 44.88 | 57.46 | 40.55 |
lcl|VRMN01000001.1_cds_KAA8497672.1_6625 (KAA8497672) | 52.6 | 29.61 | 31.43 | 51.43 | 28.07 | 51.82 | 29.93 | 52.18 | 30.68 | 44.86 | 30.2 | 46.13 | 40.28 |
lcl|VRMN01000001.1_cds_KAA8497735.1_6688 (KAA8497735) | 41.69 | 33.63 | 35.94 | 45.05 | 32.74 | 51.63 | 26.92 | 52.66 | 30.02 | 44.37 | 27.54 | 47.08 | 32.68 |
lcl|VRMN01000001.1_cds_KAA8497741.1_6694 (KAA8497741) | 64.44 | 48.92 | 50.74 | 67.98 | 50.97 | 75.67 | 42.44 | 77.15 | 58.6 | 62.35 | 50.61 | 62.12 | 59.8 |
lcl|VRMN01000001.1_cds_KAA8498276.1_7229 (KAA8498276) | 204.96 | 224.19 | 214.01 | 251.67 | 118.92 | 215.81 | 160.11 | 220.95 | 143.75 | 289.14 | 143.41 | 242.98 | 142.5 |
lcl|VRMN01000001.1_cds_KAA8498434.1_7387 (KAA8498434) | 70.58 | 58.45 | 54.38 | 75.69 | 51.42 | 76.28 | 45.0 | 83.14 | 50.02 | 77.45 | 47.96 | 80.76 | 56.76 |
lcl|VRMN01000001.1_cds_KAA8498540.1_7493 (KAA8498540) | 123.5 | 103.04 | 114.08 | 148.04 | 88.84 | 156.38 | 86.14 | 165.24 | 99.78 | 159.63 | 99.01 | 176.7 | 110.07 |
lcl|VRMN01000001.1_cds_KAA8498659.1_7612 (KAA8498659) | 36.85 | 25.12 | 27.17 | 45.85 | 31.22 | 54.24 | 22.56 | 59.78 | 27.7 | 49.88 | 26.3 | 52.61 | 37.9 |
lcl|VRMN01000001.1_cds_KAA8498679.1_7632 (KAA8498679) | 26.01 | 27.16 | 24.82 | 30.98 | 26.62 | 38.64 | 19.82 | 39.35 | 25.17 | 33.59 | 21.11 | 34.59 | 30.18 |
lcl|VRMN01000001.1_cds_KAA8498810.1_7763 (KAA8498810) | 95.3 | 82.72 | 86.48 | 103.96 | 83.52 | 112.5 | 66.73 | 127.25 | 72.61 | 122.7 | 71.79 | 117.1 | 90.47 |
lcl|VRMN01000001.1_cds_KAA8498955.1_7908 (KAA8498955) | 59.54 | 66.87 | 66.34 | 72.86 | 53.88 | 87.68 | 44.99 | 92.14 | 59.05 | 82.08 | 58.61 | 83.0 | 86.79 |
lcl|VRMN01000001.1_cds_KAA8498979.1_7932 (KAA8498979) | 31.88 | 32.03 | 33.84 | 37.36 | 27.9 | 42.5 | 27.41 | 49.2 | 33.49 | 42.14 | 30.6 | 44.13 | 38.9 |
lcl|VRMN01000001.1_cds_KAA8499095.1_8048 (KAA8499095) | 138.44 | 140.67 | 129.49 | 162.78 | 107.08 | 176.69 | 109.37 | 169.08 | 132.46 | 158.36 | 118.43 | 152.19 | 135.96 |
lcl|VRMN01000001.1_cds_KAA8499128.1_8081 (KAA8499128) | 54.28 | 47.87 | 44.44 | 60.48 | 45.83 | 73.86 | 39.56 | 80.26 | 46.68 | 62.87 | 40.66 | 72.24 | 49.43 |
lcl|VRMN01000001.1_cds_KAA8499603.1_8556 (KAA8499603) | 40.74 | 37.41 | 35.68 | 57.08 | 34.21 | 68.0 | 35.39 | 69.75 | 39.16 | 64.03 | 41.95 | 62.36 | 55.51 |
lcl|VRMN01000001.1_cds_KAA8499801.1_8754 (KAA8499801) | 531.05 | 512.59 | 447.48 | 439.07 | 311.76 | 569.1 | 205.2 | 548.42 | 219.87 | 373.53 | 190.56 | 420.58 | 263.69 |
lcl|VRMN01000001.1_cds_KAA8499876.1_8829 (KAA8499876) | 82.16 | 94.68 | 85.15 | 103.8 | 71.95 | 118.0 | 51.12 | 128.49 | 66.79 | 118.21 | 62.81 | 128.86 | 68.72 |
lcl|VRMN01000001.1_cds_KAA8499911.1_8864 (KAA8499911) | 38.53 | 37.19 | 35.77 | 43.89 | 34.18 | 47.97 | 29.46 | 50.26 | 37.54 | 43.51 | 36.44 | 43.09 | 42.45 |
lcl|VRMN01000001.1_cds_KAA8499928.1_8881 (KAA8499928) | 25.2 | 28.61 | 28.25 | 31.27 | 23.63 | 36.11 | 23.07 | 37.96 | 26.85 | 33.7 | 26.27 | 34.43 | 33.66 |
lcl|VRMN01000001.1_cds_KAA8499986.1_8939 (KAA8499986) | 38.85 | 27.84 | 30.03 | 41.52 | 22.42 | 45.33 | 22.03 | 50.68 | 29.05 | 44.29 | 32.84 | 50.42 | 42.99 |
lcl|VRMN01000002.1_cds_KAA8496494.1_223 (KAA8496494) | 100.86 | 95.0 | 99.19 | 105.39 | 69.97 | 137.66 | 61.27 | 154.55 | 71.99 | 125.41 | 62.35 | 159.09 | 106.77 |
lcl|VRMN01000002.1_cds_KAA8496545.1_274 (KAA8496545) | 162.49 | 103.17 | 100.92 | 140.12 | 137.49 | 186.69 | 86.27 | 190.3 | 110.3 | 149.53 | 98.79 | 180.91 | 129.4 |
lcl|VRMN01000002.1_cds_KAA8496566.1_295 (KAA8496566) | 50.97 | 42.8 | 33.33 | 58.49 | 40.45 | 64.12 | 44.26 | 59.31 | 53.16 | 53.62 | 47.36 | 55.65 | 53.77 |
lcl|VRMN01000002.1_cds_KAA8496599.1_328 (KAA8496599) | 79.84 | 53.52 | 55.65 | 71.44 | 52.64 | 77.0 | 39.3 | 81.56 | 52.33 | 73.13 | 49.12 | 78.02 | 56.63 |
lcl|VRMN01000002.1_cds_KAA8496748.1_477 (KAA8496748) | 44.35 | 35.7 | 33.52 | 50.01 | 30.79 | 59.14 | 31.78 | 55.9 | 44.83 | 43.11 | 39.64 | 44.44 | 45.33 |
lcl|VRMN01000002.1_cds_KAA8496876.1_605 (KAA8496876) | 35.94 | 39.15 | 35.38 | 58.83 | 45.22 | 79.86 | 33.69 | 74.06 | 42.81 | 58.05 | 37.29 | 61.86 | 46.81 |
lcl|VRMN01000002.1_cds_KAA8496895.1_624 (KAA8496895) | 28.86 | 18.37 | 15.62 | 36.79 | 18.9 | 45.7 | 17.43 | 44.27 | 22.35 | 33.12 | 25.01 | 37.55 | 29.72 |
lcl|VRMN01000002.1_cds_KAA8496967.1_696 (KAA8496967) | 26.59 | 25.44 | 27.82 | 31.16 | 18.1 | 31.37 | 15.9 | 33.32 | 15.99 | 36.01 | 17.0 | 32.39 | 22.52 |
lcl|VRMN01000002.1_cds_KAA8497026.1_755 (KAA8497026) | 426.97 | 426.58 | 385.96 | 484.5 | 300.53 | 599.91 | 248.94 | 605.74 | 307.09 | 427.43 | 293.17 | 483.85 | 376.21 |
lcl|VRMN01000002.1_cds_KAA8497284.1_1013 (KAA8497284) | 24.69 | 15.39 | 13.05 | 26.15 | 10.25 | 24.02 | 8.44 | 29.2 | 12.16 | 27.2 | 13.85 | 28.51 | 22.44 |
lcl|VRMN01000002.1_cds_KAA8497300.1_1029 (KAA8497300) | 70.17 | 33.39 | 34.39 | 69.3 | 36.07 | 77.78 | 32.74 | 72.11 | 42.2 | 63.94 | 42.99 | 74.09 | 47.59 |
lcl|VRMN01000002.1_cds_KAA8497352.1_1081 (KAA8497352) | 65.7 | 42.58 | 47.27 | 76.75 | 49.25 | 81.19 | 44.04 | 82.14 | 45.97 | 76.52 | 44.3 | 79.24 | 54.86 |
lcl|VRMN01000002.1_cds_KAA8497366.1_1095 (KAA8497366) | 67.31 | 69.54 | 71.4 | 72.32 | 51.28 | 72.43 | 47.8 | 71.34 | 51.31 | 71.35 | 48.27 | 69.75 | 58.92 |
lcl|VRMN01000002.1_cds_KAA8497405.1_1134 (KAA8497405) | 78.53 | 61.21 | 65.09 | 79.3 | 60.91 | 78.39 | 58.54 | 70.99 | 65.38 | 77.98 | 61.51 | 70.69 | 77.67 |
lcl|VRMN01000002.1_cds_KAA8497438.1_1167 (KAA8497438) | 55.7 | 38.08 | 36.52 | 64.99 | 36.51 | 70.92 | 32.4 | 73.45 | 37.43 | 69.52 | 35.09 | 70.72 | 44.32 |
lcl|VRMN01000003.1_cds_KAA8495271.1_1269 (KAA8495271) | 85.29 | 55.47 | 47.47 | 96.34 | 45.86 | 94.62 | 50.04 | 94.64 | 53.0 | 94.22 | 50.03 | 97.57 | 59.68 |
lcl|VRMN01000003.1_cds_KAA8495377.1_1375 (KAA8495377) | 125.63 | 109.62 | 94.26 | 125.3 | 67.33 | 143.7 | 79.48 | 142.04 | 83.34 | 122.5 | 90.57 | 153.88 | 117.37 |
lcl|VRMN01000003.1_cds_KAA8495413.1_1411 (KAA8495413) | 29.95 | 21.53 | 21.55 | 24.11 | 19.93 | 31.52 | 15.82 | 32.46 | 19.36 | 23.78 | 18.65 | 29.11 | 29.31 |
lcl|VRMN01000003.1_cds_KAA8495465.1_1463 (KAA8495465) | 141.88 | 138.55 | 120.88 | 164.57 | 90.02 | 197.86 | 58.04 | 178.52 | 75.73 | 188.88 | 80.75 | 156.91 | 117.08 |
lcl|VRMN01000003.1_cds_KAA8495885.1_1883 (KAA8495885) | 67.22 | 55.68 | 54.74 | 84.49 | 57.88 | 100.08 | 50.5 | 102.32 | 58.83 | 83.75 | 54.15 | 90.96 | 64.24 |
lcl|VRMN01000003.1_cds_KAA8495962.1_1960 (KAA8495962) | 55.77 | 52.16 | 46.46 | 78.06 | 53.0 | 103.79 | 52.19 | 105.12 | 51.58 | 82.73 | 54.09 | 93.6 | 71.25 |
lcl|VRMN01000003.1_cds_KAA8495963.1_1961 (KAA8495963) | 24.71 | 18.07 | 17.47 | 33.11 | 17.97 | 40.59 | 14.57 | 38.64 | 20.3 | 31.07 | 24.06 | 28.48 | 29.81 |
lcl|VRMN01000003.1_cds_KAA8496036.1_2034 (KAA8496036) | 68.58 | 59.73 | 62.31 | 80.53 | 52.75 | 91.63 | 52.42 | 96.24 | 57.54 | 80.09 | 53.73 | 87.79 | 66.33 |
lcl|VRMN01000003.1_cds_KAA8496129.1_2127 (KAA8496129) | 37.52 | 36.86 | 35.03 | 42.86 | 32.5 | 47.71 | 27.51 | 48.1 | 31.29 | 41.38 | 28.56 | 42.06 | 36.06 |
lcl|VRMN01000004.1_cds_KAA8494454.1_2984 (KAA8494454) | 62.81 | 38.0 | 44.37 | 57.95 | 38.93 | 63.39 | 31.97 | 69.28 | 37.68 | 58.19 | 35.36 | 67.57 | 44.61 |
lcl|VRMN01000004.1_cds_KAA8494618.1_3148 (KAA8494618) | 27.45 | 26.92 | 25.45 | 32.27 | 22.68 | 35.21 | 19.05 | 37.5 | 20.59 | 38.34 | 18.61 | 36.92 | 23.62 |
lcl|VRMN01000004.1_cds_KAA8494961.1_3491 (KAA8494961) | 132.89 | 105.97 | 111.97 | 137.19 | 75.9 | 140.51 | 80.53 | 149.01 | 109.23 | 129.14 | 110.42 | 129.14 | 122.6 |
lcl|VRMN01000004.1_cds_KAA8495102.1_3632 (KAA8495102) | 24.13 | 27.23 | 23.08 | 35.34 | 20.31 | 51.77 | 17.58 | 49.01 | 23.51 | 40.56 | 15.55 | 47.48 | 25.29 |
lcl|VRMN01000004.1_cds_KAA8495161.1_3691 (KAA8495161) | 43.56 | 38.1 | 37.79 | 43.64 | 31.4 | 38.5 | 32.98 | 36.75 | 34.47 | 39.58 | 32.11 | 38.95 | 37.15 |
lcl|VRMN01000005.1_cds_KAA8493974.1_3838 (KAA8493974) | 51.9 | 65.68 | 64.53 | 72.91 | 36.43 | 85.06 | 41.51 | 88.24 | 44.85 | 76.21 | 43.31 | 83.08 | 59.94 |
lcl|VRMN01000005.1_cds_KAA8494010.1_3874 (KAA8494010) | 64.68 | 53.89 | 54.02 | 77.0 | 31.56 | 82.28 | 38.83 | 85.7 | 40.07 | 74.9 | 36.64 | 74.14 | 40.49 |
lcl|VRMN01000005.1_cds_KAA8494147.1_4011 (KAA8494147) | 32.31 | 29.58 | 26.42 | 41.33 | 25.99 | 42.02 | 25.84 | 44.63 | 29.12 | 44.54 | 27.63 | 48.24 | 32.63 |
lcl|VRMN01000005.1_cds_KAA8494148.1_4012 (KAA8494148) | 51.85 | 34.63 | 31.75 | 50.63 | 39.44 | 56.08 | 35.78 | 58.45 | 41.59 | 49.14 | 38.07 | 55.43 | 45.37 |
lcl|VRMN01000005.1_cds_KAA8494155.1_4019 (KAA8494155) | 40.71 | 37.01 | 33.1 | 47.68 | 31.06 | 47.05 | 20.38 | 47.14 | 36.02 | 38.38 | 30.36 | 37.8 | 34.94 |
lcl|VRMN01000005.1_cds_KAA8494163.1_4027 (KAA8494163) | 96.14 | 104.5 | 91.35 | 106.03 | 76.37 | 125.36 | 79.05 | 128.42 | 84.4 | 120.13 | 74.53 | 128.52 | 86.33 |
lcl|VRMN01000005.1_cds_KAA8494195.1_4059 (KAA8494195) | 41.96 | 33.91 | 25.85 | 41.14 | 20.65 | 45.06 | 17.95 | 47.93 | 24.32 | 44.78 | 23.8 | 50.93 | 28.54 |
lcl|VRMN01000005.1_cds_KAA8494256.1_4120 (KAA8494256) | 50.28 | 38.91 | 40.61 | 58.28 | 32.96 | 61.18 | 35.36 | 62.78 | 38.29 | 51.82 | 38.63 | 58.94 | 43.65 |
lcl|VRMN01000006.1_cds_KAA8493684.1_4446 (KAA8493684) | 27.2 | 24.98 | 26.05 | 27.42 | 23.75 | 32.09 | 21.04 | 32.43 | 23.94 | 27.87 | 23.88 | 27.16 | 29.61 |
lcl|VRMN01000006.1_cds_KAA8493721.1_4483 (KAA8493721) | 87.84 | 56.31 | 54.98 | 109.52 | 100.85 | 159.51 | 76.01 | 186.41 | 69.87 | 151.29 | 61.61 | 183.62 | 87.2 |
lcl|VRMN01000006.1_cds_KAA8493767.1_4529 (KAA8493767) | 57.24 | 38.78 | 39.13 | 65.14 | 34.04 | 61.96 | 37.94 | 60.43 | 39.96 | 62.81 | 40.07 | 58.27 | 41.79 |
lcl|VRMN01000007.1_cds_KAA8493126.1_9427 (KAA8493126) | 43.72 | 35.67 | 33.53 | 55.64 | 30.65 | 60.04 | 25.36 | 62.64 | 34.82 | 59.13 | 35.14 | 58.2 | 44.91 |
lcl|VRMN01000009.1_cds_KAA8492462.1_9155 (KAA8492462) | 135.69 | 65.2 | 67.11 | 151.11 | 72.62 | 185.21 | 70.4 | 188.39 | 91.49 | 134.8 | 78.46 | 153.25 | 95.03 |
lcl|VRMN01000010.1_cds_KAA8492122.1_5305 (KAA8492122) | 53.94 | 29.9 | 23.44 | 63.92 | 28.79 | 68.31 | 28.2 | 68.74 | 34.45 | 75.31 | 36.81 | 71.3 | 43.35 |
lcl|VRMN01000010.1_cds_KAA8492195.1_5378 (KAA8492195) | 46.11 | 45.64 | 46.04 | 48.78 | 30.51 | 47.54 | 31.3 | 47.72 | 33.67 | 48.06 | 30.26 | 48.81 | 37.27 |
lcl|VRMN01000010.1_cds_KAA8492215.1_5398 (KAA8492215) | 68.47 | 36.86 | 25.93 | 67.16 | 34.63 | 73.71 | 30.79 | 69.92 | 36.18 | 81.02 | 39.32 | 77.89 | 42.14 |
lcl|VRMN01000010.1_cds_KAA8492216.1_5399 (KAA8492216) | 47.27 | 51.22 | 52.04 | 60.6 | 41.71 | 72.85 | 40.81 | 80.53 | 46.88 | 62.3 | 46.38 | 72.27 | 58.16 |
lcl|VRMN01000010.1_cds_KAA8492265.1_5448 (KAA8492265) | 21.94 | 21.89 | 22.05 | 25.12 | 17.77 | 26.26 | 16.68 | 23.75 | 21.81 | 22.27 | 19.58 | 19.13 | 23.96 |
lcl|VRMN01000010.1_cds_KAA8492287.1_5470 (KAA8492287) | 25.49 | 22.48 | 19.63 | 32.85 | 10.11 | 39.42 | 13.58 | 38.0 | 20.47 | 33.96 | 22.55 | 24.3 | 29.39 |
lcl|VRMN01000010.1_cds_KAA8492352.1_5535 (KAA8492352) | 44.46 | 30.65 | 24.82 | 62.39 | 29.87 | 78.53 | 30.52 | 72.65 | 40.27 | 58.06 | 54.04 | 55.35 | 58.25 |
lcl|VRMN01000011.1_cds_KAA8491760.1_4768 (KAA8491760) | 94.89 | 89.08 | 91.32 | 96.68 | 74.99 | 109.02 | 64.77 | 110.64 | 79.65 | 97.06 | 80.64 | 110.59 | 94.0 |
lcl|VRMN01000011.1_cds_KAA8491918.1_4926 (KAA8491918) | 158.64 | 81.31 | 76.22 | 167.07 | 79.21 | 183.53 | 67.8 | 182.69 | 89.82 | 157.61 | 94.99 | 147.66 | 108.39 |
lcl|VRMN01000013.1_cds_KAA8491434.1_6244 (KAA8491434) | 85.5 | 65.15 | 67.46 | 101.22 | 62.86 | 108.77 | 57.51 | 108.99 | 69.77 | 100.7 | 71.95 | 99.65 | 84.77 |
lcl|VRMN01000014.1_cds_KAA8491387.1_2388 (KAA8491387) | 22.03 | 20.88 | 27.46 | 35.38 | 19.01 | 32.33 | 22.29 | 30.92 | 22.0 | 36.48 | 22.89 | 35.68 | 24.04 |
lcl|VRMN01000015.1_cds_KAA8491254.1_5882 (KAA8491254) | 222.76 | 102.6 | 94.18 | 222.49 | 100.98 | 203.78 | 137.42 | 235.82 | 139.0 | 238.83 | 122.03 | 269.36 | 138.67 |
lcl|VRMN01000016.1_cds_KAA8491064.1_9821 (KAA8491064) | 138.13 | 113.91 | 102.88 | 134.0 | 82.67 | 143.64 | 93.48 | 135.87 | 99.56 | 124.42 | 92.22 | 144.88 | 96.14 |
lcl|VRMN01000016.1_cds_KAA8491130.1_9887 (KAA8491130) | 14.44 | 9.98 | 9.37 | 15.92 | 9.59 | 18.32 | 8.65 | 21.12 | 9.99 | 23.92 | 10.26 | 25.1 | 12.08 |
lcl|VRMN01000018.1_cds_KAA8490794.1_5566 (KAA8490794) | 83.47 | 40.93 | 40.22 | 102.35 | 43.97 | 90.35 | 47.13 | 92.97 | 45.39 | 106.35 | 47.22 | 97.71 | 58.04 |
lcl|VRMN01000018.1_cds_KAA8490812.1_5584 (KAA8490812) | 50.08 | 61.68 | 62.82 | 65.76 | 42.62 | 73.38 | 44.29 | 76.78 | 48.94 | 72.45 | 46.08 | 74.59 | 54.49 |
lcl|VRMN01000018.1_cds_KAA8490829.1_5601 (KAA8490829) | 32.16 | 29.47 | 26.68 | 33.32 | 27.74 | 42.87 | 23.36 | 40.42 | 27.27 | 31.19 | 24.96 | 29.43 | 31.41 |
lcl|VRMN01000018.1_cds_KAA8490836.1_5608 (KAA8490836) | 53.0 | 46.05 | 48.1 | 73.44 | 45.61 | 84.54 | 40.22 | 84.33 | 51.44 | 72.28 | 54.39 | 72.7 | 67.59 |
lcl|VRMN01000018.1_cds_KAA8490851.1_5623 (KAA8490851) | 141.41 | 88.7 | 84.86 | 146.29 | 87.14 | 168.91 | 90.01 | 171.01 | 98.3 | 130.37 | 81.11 | 147.52 | 113.3 |
lcl|VRMN01000018.1_cds_KAA8490883.1_5655 (KAA8490883) | 147.24 | 51.63 | 56.31 | 139.3 | 54.81 | 150.08 | 45.68 | 156.03 | 56.16 | 125.5 | 54.52 | 137.01 | 74.29 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)