Heatmap: Cluster_1 (HCCA)

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Gene
WT,12hL12hD,Log,1h Dark
WT,12hL12hD,Log,1h Light
WT,12hL12hD,Log,1h Light d2
WT,12hL12hD,Log,3h Dark
WT,12hL12hD,Log,3h Light
WT,12hL12hD,Log,5h Dark
WT,12hL12hD,Log,5h Light
WT,12hL12hD,Log,7h Dark
WT,12hL12hD,Log,7h Light
WT,12hL12hD,Log,9h Dark
WT,12hL12hD,Log,9h Light
WT,12hL12hD,Log,11h Dark
WT,12hL12hD,Log,11h Light
102.0 16.42 14.98 65.85 11.13 27.24 25.69 22.8 30.2 34.67 31.56 24.02 29.45
363.24 76.08 77.17 256.15 108.12 191.44 122.52 170.61 125.45 184.63 113.19 166.84 115.71
65.95 41.48 41.81 68.7 29.38 58.86 34.9 61.37 38.41 70.66 37.77 63.92 44.09
51.88 28.31 23.77 41.7 29.25 48.54 29.38 40.99 32.37 34.67 31.95 30.3 55.67
49.3 9.98 9.5 38.92 39.04 28.38 26.36 28.48 26.56 30.54 32.73 21.4 25.71
62.61 11.41 10.79 44.44 18.45 34.03 11.23 35.92 16.1 51.1 21.82 50.44 23.66
95.67 41.13 45.15 67.47 43.69 66.54 41.61 66.15 56.27 55.39 53.89 48.45 68.68
144.67 59.5 75.79 117.46 91.16 123.66 66.77 112.27 75.63 93.74 91.91 81.66 109.65
36.75 20.01 23.79 33.19 25.97 28.04 20.93 31.34 20.69 37.08 20.35 38.36 26.0
279.25 128.4 89.93 353.33 266.37 131.39 301.45 119.37 255.96 210.03 256.17 141.64 181.33
129.56 61.46 58.71 124.46 61.91 125.38 64.79 113.83 83.26 95.96 74.51 80.56 78.7
126.51 61.07 46.5 145.71 37.89 104.35 44.63 85.35 52.52 73.7 57.41 49.89 68.49
1408.81 631.27 654.25 1145.54 435.2 786.89 570.48 664.93 611.5 537.25 614.12 488.37 826.14
6.17 4.17 2.68 9.37 3.21 3.8 4.08 4.33 5.29 7.13 6.24 3.59 4.33
141.14 38.04 33.97 77.1 39.04 63.21 44.67 48.01 51.75 53.75 42.11 47.16 48.43
94.48 62.76 69.08 100.81 53.67 57.33 76.12 49.84 63.73 80.11 72.57 47.5 71.83
200.69 170.62 161.45 236.67 125.42 166.39 178.43 149.26 171.51 233.7 191.99 166.17 178.54
248.43 114.96 135.11 271.05 101.62 172.73 140.36 145.28 132.87 249.88 149.9 169.09 149.55
32.97 21.11 24.45 39.78 21.37 21.57 21.01 22.15 25.12 39.44 33.2 19.69 25.46
302.16 116.64 98.18 210.45 159.3 202.85 155.15 223.33 182.8 228.71 152.45 173.85 154.12
272.64 44.37 36.43 142.91 67.83 91.36 86.9 95.34 93.81 114.39 72.79 132.69 69.75
646.59 185.54 154.63 461.33 202.14 300.34 407.51 259.77 437.96 287.61 377.19 268.75 240.56
120.3 60.77 55.49 93.15 64.07 77.92 75.59 83.09 64.79 99.65 61.48 104.3 66.27
158.83 69.85 54.9 128.09 79.17 119.37 93.04 111.75 133.32 108.87 121.81 146.15 114.19
41.05 14.01 12.1 44.38 17.2 48.39 8.21 50.89 20.39 29.11 40.76 29.13 40.74
216.79 140.0 159.8 200.74 160.51 263.65 120.74 262.81 137.75 198.51 161.52 234.45 185.78
56.11 15.34 14.19 44.42 15.63 46.1 18.84 43.44 37.47 37.83 40.56 33.27 40.9
38.04 3.91 1.45 36.21 4.72 14.34 2.96 13.83 5.75 10.23 10.94 9.61 13.02
104.46 42.0 40.36 103.78 43.57 84.79 44.46 75.57 48.02 67.01 52.09 49.83 66.78
365.04 113.88 138.52 271.42 133.89 128.25 206.9 96.55 214.01 104.52 182.03 88.47 162.05
175.67 23.38 29.75 160.59 75.5 97.22 89.98 84.84 100.24 77.21 101.12 37.45 89.64
207.17 120.59 105.15 184.41 131.08 152.19 135.73 139.2 139.53 134.3 128.03 122.88 134.32
23.9 14.71 12.71 28.66 17.33 17.86 15.63 14.7 15.69 19.5 20.47 10.45 23.63
208.82 80.04 68.32 150.88 71.15 169.27 72.96 150.28 88.04 147.88 85.23 134.58 104.76
118.5 50.94 39.87 53.62 58.02 38.49 68.52 36.17 84.24 49.19 67.5 51.73 74.94
544.65 300.43 306.79 621.59 303.25 457.14 451.01 429.91 479.02 620.36 521.29 461.76 390.66
10311.86 9179.38 7892.48 10048.64 8333.57 9018.57 7730.69 9282.93 8205.7 11750.67 6669.76 9271.94 7115.61
115.44 67.84 66.93 110.17 57.79 91.16 75.85 76.94 79.64 83.71 75.5 73.41 72.76
295.73 63.74 47.78 158.2 92.59 95.37 80.45 72.52 84.99 84.77 58.92 87.55 43.62
186.6 61.69 63.33 131.41 58.8 105.59 74.73 104.12 95.88 127.21 84.47 124.71 96.61
268.63 87.73 102.88 169.29 156.58 132.77 128.32 136.14 137.71 132.91 113.26 145.91 116.68
115.73 39.15 45.32 73.16 66.12 73.33 44.19 70.16 54.08 74.61 47.4 72.38 57.97
50.93 30.69 22.93 28.87 6.99 16.3 14.34 9.09 6.94 3.33 3.59 2.59 8.44
61.75 4.1 2.36 60.03 5.49 23.24 3.98 26.6 7.85 20.94 10.78 18.07 12.06
57.61 18.46 18.95 42.28 21.07 27.65 28.11 22.01 27.55 28.45 26.71 18.52 32.27
238.41 89.8 62.4 203.83 66.73 137.88 77.98 117.4 103.54 111.75 92.52 85.93 137.66
258.35 109.99 116.62 299.35 136.35 177.22 172.75 214.67 170.66 280.13 155.79 225.03 207.44
745.79 4.82 4.92 906.77 10.01 727.81 28.89 424.43 46.77 193.86 67.05 86.42 182.71
327.93 18.63 12.06 352.35 16.85 350.27 29.1 282.13 42.92 171.31 30.96 263.46 42.25
1613.23 549.71 470.61 1345.39 676.69 1470.7 645.42 1508.55 799.46 1136.01 742.13 1204.26 885.82
75.64 47.79 39.46 64.18 35.51 58.13 39.95 55.27 52.14 52.24 48.71 51.61 52.82
108.51 19.55 9.42 53.95 13.94 54.37 26.79 48.09 45.62 45.11 41.49 52.76 51.17
732.39 53.26 37.19 486.08 50.38 254.17 66.07 207.15 64.67 239.08 41.22 328.36 42.91
542.81 103.23 82.95 354.57 149.85 285.16 204.37 267.42 211.25 278.79 174.45 240.25 290.01
102.21 31.27 29.75 103.78 35.5 71.25 46.15 64.57 49.27 97.78 49.12 69.12 54.57
141.12 71.13 65.55 153.66 69.81 117.83 86.04 112.68 84.28 146.93 94.5 131.25 98.07
317.86 396.75 427.49 510.57 231.19 294.15 321.69 270.96 273.42 721.22 386.53 330.45 372.53
65.53 28.22 26.88 82.93 27.22 56.67 45.04 44.91 42.12 84.47 37.58 68.06 38.51
112.02 63.63 60.69 128.97 64.39 70.33 90.98 61.33 81.96 122.5 95.74 65.32 79.63
118.95 74.6 63.24 90.99 50.85 57.68 80.63 52.96 83.28 71.09 78.53 61.39 68.17
257.9 58.63 55.76 100.91 72.68 105.29 47.27 111.71 44.9 126.13 49.44 115.65 59.8
44.79 21.72 19.5 44.19 20.82 32.02 29.46 30.68 28.85 42.11 25.15 31.83 23.17
52.65 29.87 33.75 54.3 28.07 62.73 31.64 52.64 35.55 52.1 34.63 48.94 43.34
681.45 30.39 18.2 308.99 83.14 133.06 176.69 119.31 235.21 138.44 170.33 198.1 119.96
568.94 202.46 179.91 453.99 294.69 328.35 309.97 317.42 309.41 355.77 298.47 337.81 271.18
34.77 17.73 20.27 42.74 14.1 29.82 21.39 27.27 21.37 44.81 24.26 32.95 22.95
26.71 13.17 8.35 29.56 8.0 27.64 14.48 21.42 15.22 35.92 9.2 24.94 10.99
973.2 111.75 110.86 789.73 163.97 804.0 194.86 774.61 196.46 596.43 199.12 644.54 541.73
3128.75 628.79 602.43 2053.64 954.96 2289.31 1017.18 2500.99 1009.47 1938.45 826.24 2562.19 1525.55
4492.34 77.18 44.28 3309.58 126.87 1951.87 344.79 1626.68 572.03 2095.08 578.34 2541.7 476.69
127.77 31.85 23.29 78.04 39.33 61.78 57.03 53.73 65.74 54.54 51.71 76.19 53.16
104.56 16.58 13.97 57.65 23.98 45.7 21.3 44.43 27.93 54.93 25.08 61.59 28.62
19.89 3.99 5.0 16.19 4.38 7.69 4.01 8.61 4.33 8.11 5.81 4.89 6.38
329.98 106.43 89.47 353.07 144.94 225.59 167.84 205.17 177.49 347.34 172.19 260.19 135.71
67.74 32.63 31.74 57.53 35.24 58.88 37.16 57.35 44.75 47.61 37.99 46.19 45.04
42.85 16.28 16.17 25.81 20.37 25.53 13.18 27.24 18.93 25.29 15.65 26.97 27.15
757.88 25.44 18.57 439.97 14.57 133.48 7.81 91.43 17.93 123.16 113.69 56.15 157.96
1027.76 44.65 41.97 636.74 11.34 183.64 7.01 136.09 26.9 185.15 222.12 90.02 321.06
39.62 33.82 29.5 55.37 35.86 44.63 48.57 41.6 56.09 61.32 71.05 41.63 60.31
82.57 74.09 64.85 111.6 74.26 80.32 105.6 73.08 132.09 108.55 122.98 76.15 111.1
147.09 81.43 85.52 116.43 96.08 109.21 105.22 94.14 105.58 90.97 111.4 82.68 129.44
298.17 38.13 24.37 216.43 106.13 190.12 41.32 164.25 68.26 164.52 98.81 142.08 135.35
229.48 94.48 86.61 246.01 102.44 237.11 95.81 224.09 132.57 160.76 126.43 156.18 205.84
176.78 61.35 58.15 134.55 54.25 88.76 115.8 76.55 105.33 108.81 94.66 111.59 84.3
219.56 187.13 168.31 277.72 163.95 271.33 183.47 270.95 235.12 318.64 255.63 293.54 237.79
87.88 20.46 17.34 58.78 32.71 64.71 34.79 62.33 45.89 47.25 47.97 64.7 49.24
328.71 2.6 1.81 189.04 44.14 32.16 60.12 19.96 59.2 44.43 71.57 20.71 58.82
41.09 12.43 14.92 20.49 22.28 16.25 20.49 14.86 16.69 16.66 13.85 13.51 26.75
79.0 41.29 35.25 57.55 12.67 43.32 12.7 40.67 17.83 33.47 21.23 23.67 29.35
32.64 11.49 14.42 24.66 13.64 17.16 14.95 13.9 17.91 21.1 20.75 17.08 22.37
131.51 95.96 76.0 138.37 86.42 105.52 97.75 96.25 98.21 133.78 122.94 92.06 130.09
407.38 76.88 68.15 253.76 159.07 135.84 216.6 118.83 224.96 164.43 203.41 149.89 132.09
33.74 29.96 25.85 42.16 24.48 32.93 28.17 26.59 23.36 44.38 27.52 25.64 27.13
57.99 28.73 29.68 47.52 20.09 32.21 36.76 31.04 35.04 44.57 30.27 36.81 24.65
338.97 200.56 179.29 239.14 114.64 208.73 129.05 225.75 109.85 168.72 71.68 187.43 229.4
276.64 33.91 28.51 301.65 178.67 186.24 120.92 185.63 182.24 181.07 203.88 120.37 180.03
1565.94 388.25 249.41 1309.25 307.75 915.34 523.66 828.71 791.32 720.03 674.37 765.87 504.49
87.86 27.03 29.73 47.0 34.59 34.02 25.71 27.11 32.63 31.98 30.27 28.67 34.36
182.35 9.8 6.95 74.4 29.75 31.53 27.9 25.23 32.53 35.0 28.36 37.17 27.12
283.82 66.21 64.12 176.18 100.43 172.26 82.39 172.41 99.21 170.93 93.5 131.94 142.27
93.78 41.24 35.6 83.95 56.71 76.33 37.26 66.01 43.01 71.14 46.07 83.09 54.05
93.03 14.45 5.75 64.61 57.37 34.2 61.11 33.56 83.54 60.37 82.55 43.66 43.92
291.21 36.23 22.42 227.99 251.06 120.31 232.59 126.45 297.72 203.88 253.22 184.27 131.53
224.79 42.24 36.2 231.43 41.07 228.84 31.61 230.87 45.2 157.06 34.5 194.93 102.19
46.73 53.78 36.8 53.21 52.05 89.53 25.68 73.87 44.15 43.56 44.56 59.0 66.1
55.8 22.35 25.2 44.83 23.18 31.33 24.48 27.56 25.32 36.27 27.91 29.37 26.37
311.09 109.34 126.06 283.69 108.64 150.95 118.56 129.16 121.07 188.13 185.46 116.22 159.16
37.63 10.72 14.56 56.34 17.94 34.5 33.93 33.95 39.25 52.2 45.55 34.56 28.68
47.29 8.77 7.72 55.18 5.91 29.91 6.17 23.24 14.7 39.0 32.07 17.16 31.92
366.09 83.83 54.79 327.82 16.21 232.46 24.97 253.48 36.92 286.55 52.14 269.59 76.34
77.26 25.48 28.7 53.23 31.9 49.2 26.41 44.33 25.54 39.52 26.72 36.58 47.97
80.22 25.94 25.98 61.29 37.89 32.19 41.76 35.01 44.83 59.94 49.97 40.13 48.55
342.61 101.05 136.33 266.46 121.27 192.38 130.57 144.35 142.45 148.73 131.45 109.9 224.78
2843.56 873.64 491.9 2844.15 461.52 2131.01 769.33 2162.03 748.73 1913.76 499.72 2195.65 1416.16
807.12 129.44 104.63 496.1 99.04 314.64 182.43 304.73 188.98 388.43 165.27 377.65 262.85
67.5 37.54 31.36 63.03 46.44 64.35 39.97 63.4 40.84 75.47 45.49 60.26 49.23
60.92 22.01 24.19 66.42 48.11 49.51 47.17 48.46 39.57 73.11 38.96 53.55 36.06
575.84 70.02 41.39 282.81 60.15 217.89 64.71 239.86 81.81 281.99 80.94 322.12 90.06
346.95 235.37 208.66 285.36 233.96 237.85 331.69 219.43 319.94 221.21 259.6 299.1 261.77
379.59 66.71 56.04 185.64 81.88 172.11 85.21 170.99 84.27 164.51 73.04 166.99 149.35
1308.22 269.05 239.49 941.31 333.31 796.27 318.81 716.88 393.29 521.76 398.51 569.83 447.64
51.77 8.43 9.65 34.21 17.56 26.61 14.51 25.49 19.9 34.18 21.23 30.9 23.9
151.43 72.8 63.8 136.22 101.4 85.37 84.72 73.43 87.56 100.36 107.16 71.05 100.76
83.88 35.45 33.02 65.76 42.49 57.8 42.63 58.91 45.81 48.6 44.67 49.94 53.37
211.66 159.57 152.64 262.38 175.58 153.29 223.38 148.9 185.71 269.87 204.84 181.34 164.42
66.14 26.45 28.12 35.71 27.04 36.67 26.17 31.26 31.11 31.96 27.85 24.21 33.89
82.88 30.19 33.29 63.12 25.02 46.59 37.64 40.3 33.44 44.52 31.03 35.77 45.79
81.15 54.51 45.5 71.53 55.88 68.5 53.23 72.26 74.44 101.68 69.75 120.92 65.18
320.47 100.26 56.57 463.88 119.32 349.31 145.96 333.96 173.42 294.68 85.4 332.09 229.29
14.65 14.49 20.48 21.93 14.31 17.54 10.32 18.45 16.34 23.51 19.37 14.29 20.17
90.57 44.63 43.58 78.97 38.1 56.24 41.42 51.71 47.21 75.3 47.94 51.59 48.31
105.03 40.24 39.42 77.08 48.95 60.09 49.43 60.43 50.31 65.37 42.54 61.35 63.96
50.76 25.6 25.34 63.0 22.85 49.55 20.38 47.06 25.9 70.89 30.12 55.05 28.5
138.88 61.29 74.07 128.56 166.55 92.99 103.18 102.74 95.23 129.05 117.11 89.97 103.29
772.5 346.56 307.36 702.01 385.68 486.0 492.88 474.74 558.03 532.61 579.26 385.19 496.66
73.83 47.68 50.05 86.06 32.73 73.84 43.11 68.23 46.23 95.46 51.41 73.84 49.85
324.25 52.06 43.67 323.62 146.96 183.4 119.03 179.6 146.53 252.31 201.57 143.29 164.73
70.34 18.12 22.12 51.14 28.02 31.69 39.46 21.68 42.96 35.75 45.28 19.74 42.97
91.66 31.77 28.36 71.74 38.38 62.31 39.46 62.47 43.93 64.63 36.49 71.69 53.91
2497.69 761.52 496.76 1346.55 787.61 1052.8 1363.23 1105.67 1416.81 1318.38 707.04 2507.0 548.81
210.77 78.4 72.12 189.37 108.82 147.77 91.19 152.68 85.11 185.11 97.25 154.02 198.51
129.04 39.54 34.74 122.74 34.13 102.01 78.14 89.38 78.51 116.27 62.91 106.23 60.76
1532.59 441.93 361.44 1080.11 286.82 522.52 663.05 359.68 698.27 709.88 604.36 610.24 429.52
54.12 11.29 12.71 49.41 13.42 20.84 13.9 19.5 15.36 32.68 24.4 23.09 23.93
179.42 80.38 62.88 204.09 125.88 83.42 193.12 76.87 119.13 192.4 106.56 108.22 75.36
200.18 81.33 73.59 169.67 103.17 171.38 95.56 150.34 111.76 115.9 110.68 122.34 133.86
1351.19 10.87 10.58 710.88 19.71 143.98 61.58 106.79 86.23 183.36 56.63 191.25 35.12
85.93 31.9 29.88 76.9 46.4 66.3 48.85 72.39 50.3 82.72 47.63 78.33 39.44
132.34 59.89 59.45 123.24 21.62 58.46 30.29 51.6 29.55 76.47 65.94 45.22 68.51
71.08 19.18 20.97 47.88 32.7 51.73 22.0 40.03 32.0 25.65 28.58 34.41 37.73
67.43 28.78 25.33 53.72 28.34 30.12 33.95 28.01 35.58 43.36 34.27 27.5 36.18
21.21 18.19 14.69 23.96 15.32 16.08 12.32 13.27 16.33 19.96 19.17 11.18 16.71
35.59 30.06 32.19 42.71 28.67 45.81 27.92 43.95 27.53 46.57 30.82 41.08 35.29
42.89 16.46 16.72 21.88 22.2 18.41 18.97 16.7 19.81 17.5 18.85 12.49 24.75
1050.73 1.2 1.04 956.16 1.34 835.41 6.26 669.43 31.63 327.96 76.44 100.52 156.57
1328.23 391.39 301.72 795.84 526.92 511.26 519.7 441.47 538.16 468.75 387.31 584.05 372.3
7.73 5.4 4.06 7.58 12.76 4.94 13.37 5.51 12.27 9.22 9.11 14.34 5.18
105.31 42.96 27.73 68.93 48.66 38.83 64.46 33.74 59.08 56.93 49.95 51.38 44.02
82.61 78.76 47.52 111.77 64.37 106.44 84.68 109.34 83.45 155.55 93.9 165.14 100.85
27.84 11.98 13.43 31.68 14.25 10.82 16.14 11.16 22.87 28.56 25.47 9.58 18.45
1474.72 1341.56 1319.47 1429.82 1360.3 1463.12 1842.42 1334.95 1587.26 1731.13 1450.74 1743.78 1762.98
7397.12 900.15 874.06 7031.57 1146.83 3932.65 2025.76 3987.81 1624.49 6464.54 1370.38 4615.41 1610.2
35.33 17.72 15.67 32.16 21.19 27.52 16.57 24.22 22.84 24.06 22.73 21.09 27.09
1045.49 68.21 55.87 768.2 90.49 402.08 174.95 358.52 172.75 550.03 148.12 613.88 117.05
59.17 37.56 32.0 71.27 26.65 57.5 33.39 52.57 36.62 73.09 40.93 56.55 44.84
82.61 42.5 47.25 79.39 56.53 66.83 59.63 72.0 55.35 89.91 59.74 81.96 53.04
27.55 20.14 15.55 34.67 18.36 23.62 23.18 22.67 23.0 33.33 21.95 18.64 24.28
545.62 187.74 194.98 361.66 137.79 211.75 294.98 168.66 379.56 180.73 394.56 120.68 349.16
45.86 18.9 15.26 43.1 15.89 25.97 17.04 20.25 18.1 39.53 29.96 20.54 30.73
18.42 7.26 5.75 16.15 4.17 6.51 6.03 6.01 6.75 8.33 10.62 5.22 9.53
179.6 68.63 56.95 113.47 78.57 123.86 56.23 123.92 66.62 119.0 64.54 122.43 75.8
4229.14 668.21 472.51 1337.05 656.08 784.67 1007.98 873.55 1093.38 1812.63 216.6 2040.57 145.31
491.16 48.2 51.29 208.69 65.07 61.98 189.08 51.83 172.89 123.5 142.96 80.46 86.17
681.45 30.39 18.2 308.99 83.14 133.06 176.69 119.31 235.21 138.44 170.33 198.1 119.96
13.49 2.24 0.9 10.26 9.61 8.28 7.55 7.79 12.41 12.41 8.44 13.83 10.23

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)