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Gene | WT,12hL12hD,Log,1h Dark | WT,12hL12hD,Log,1h Light | WT,12hL12hD,Log,1h Light d2 | WT,12hL12hD,Log,3h Dark | WT,12hL12hD,Log,3h Light | WT,12hL12hD,Log,5h Dark | WT,12hL12hD,Log,5h Light | WT,12hL12hD,Log,7h Dark | WT,12hL12hD,Log,7h Light | WT,12hL12hD,Log,9h Dark | WT,12hL12hD,Log,9h Light | WT,12hL12hD,Log,11h Dark | WT,12hL12hD,Log,11h Light |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497601.1_6554 (KAA8497601) | 35.68 | 59.3 | 60.0 | 37.88 | 40.16 | 40.08 | 34.21 | 36.28 | 48.76 | 29.82 | 51.04 | 23.1 | 57.09 |
lcl|VRMN01000001.1_cds_KAA8497642.1_6595 (KAA8497642) | 312.59 | 609.25 | 623.23 | 365.63 | 572.99 | 341.53 | 580.9 | 334.62 | 608.3 | 380.28 | 765.13 | 290.3 | 752.06 |
lcl|VRMN01000001.1_cds_KAA8497868.1_6821 (KAA8497868) | 7.26 | 6.91 | 7.25 | 8.46 | 8.48 | 6.7 | 7.18 | 5.89 | 8.99 | 5.59 | 12.25 | 3.02 | 14.71 |
lcl|VRMN01000001.1_cds_KAA8497892.1_6845 (KAA8497892) | 12.54 | 53.41 | 53.91 | 30.36 | 50.04 | 31.57 | 56.23 | 33.74 | 58.28 | 36.02 | 71.59 | 23.45 | 63.62 |
lcl|VRMN01000001.1_cds_KAA8497894.1_6847 (KAA8497894) | 11.76 | 55.49 | 64.69 | 17.22 | 25.45 | 27.58 | 25.29 | 24.43 | 38.18 | 17.69 | 41.39 | 12.24 | 58.32 |
lcl|VRMN01000001.1_cds_KAA8498161.1_7114 (KAA8498161) | 46.65 | 75.19 | 76.26 | 56.99 | 63.51 | 64.03 | 66.67 | 56.23 | 88.54 | 49.45 | 114.12 | 38.13 | 130.44 |
lcl|VRMN01000001.1_cds_KAA8498266.1_7219 (KAA8498266) | 129.38 | 174.09 | 183.56 | 130.48 | 126.93 | 136.21 | 113.12 | 131.98 | 134.57 | 141.0 | 184.19 | 125.65 | 221.34 |
lcl|VRMN01000001.1_cds_KAA8498267.1_7220 (KAA8498267) | 28.86 | 44.53 | 42.86 | 33.54 | 32.43 | 32.65 | 33.23 | 29.3 | 43.11 | 28.3 | 54.2 | 21.98 | 56.34 |
lcl|VRMN01000001.1_cds_KAA8498296.1_7249 (KAA8498296) | 6.49 | 49.75 | 52.17 | 13.62 | 24.31 | 22.09 | 24.88 | 20.85 | 33.24 | 16.79 | 35.18 | 13.11 | 46.89 |
lcl|VRMN01000001.1_cds_KAA8498453.1_7406 (KAA8498453) | 32.13 | 143.29 | 159.18 | 82.4 | 159.98 | 120.46 | 115.64 | 128.47 | 141.74 | 110.45 | 165.81 | 80.0 | 182.05 |
lcl|VRMN01000001.1_cds_KAA8498475.1_7428 (KAA8498475) | 78.46 | 177.98 | 158.73 | 149.72 | 95.42 | 155.66 | 128.02 | 139.97 | 151.95 | 126.55 | 138.1 | 101.07 | 165.07 |
lcl|VRMN01000001.1_cds_KAA8498481.1_7434 (KAA8498481) | 21.57 | 66.0 | 74.13 | 34.38 | 39.21 | 43.54 | 38.25 | 45.32 | 47.65 | 35.52 | 46.08 | 28.6 | 64.93 |
lcl|VRMN01000001.1_cds_KAA8498730.1_7683 (KAA8498730) | 57.84 | 66.27 | 67.17 | 74.57 | 67.84 | 77.55 | 46.68 | 68.31 | 65.78 | 58.54 | 61.58 | 53.25 | 69.74 |
lcl|VRMN01000001.1_cds_KAA8498926.1_7879 (KAA8498926) | 28.42 | 59.19 | 50.22 | 37.9 | 31.76 | 49.51 | 35.53 | 46.86 | 45.48 | 32.71 | 55.9 | 29.76 | 68.58 |
lcl|VRMN01000001.1_cds_KAA8499263.1_8216 (KAA8499263) | 25.61 | 69.13 | 52.42 | 37.32 | 14.34 | 45.16 | 19.84 | 45.41 | 26.33 | 31.11 | 32.84 | 21.19 | 50.15 |
lcl|VRMN01000001.1_cds_KAA8499420.1_8373 (KAA8499420) | 7.83 | 104.66 | 97.3 | 25.37 | 43.88 | 48.47 | 46.7 | 51.86 | 73.55 | 37.99 | 115.15 | 20.57 | 116.14 |
lcl|VRMN01000001.1_cds_KAA8499516.1_8469 (KAA8499516) | 27.91 | 70.65 | 58.47 | 32.22 | 40.92 | 41.21 | 33.78 | 33.79 | 45.13 | 20.35 | 48.94 | 14.5 | 59.9 |
lcl|VRMN01000001.1_cds_KAA8499686.1_8639 (KAA8499686) | 59.08 | 77.61 | 57.75 | 60.11 | 65.36 | 68.95 | 61.17 | 65.56 | 64.15 | 66.18 | 58.45 | 62.95 | 73.09 |
lcl|VRMN01000001.1_cds_KAA8499694.1_8647 (KAA8499694) | 17.57 | 42.73 | 41.74 | 26.98 | 30.81 | 34.9 | 28.83 | 34.44 | 36.58 | 27.89 | 35.17 | 23.49 | 42.81 |
lcl|VRMN01000001.1_cds_KAA8499800.1_8753 (KAA8499800) | 11.34 | 30.35 | 29.23 | 14.15 | 25.71 | 21.68 | 17.11 | 20.83 | 25.13 | 14.05 | 25.85 | 12.62 | 33.68 |
lcl|VRMN01000001.1_cds_KAA8499901.1_8854 (KAA8499901) | 26.45 | 59.77 | 72.85 | 41.2 | 52.35 | 51.12 | 39.21 | 48.67 | 55.51 | 38.58 | 67.29 | 27.31 | 81.84 |
lcl|VRMN01000001.1_cds_KAA8500012.1_8965 (KAA8500012) | 15.1 | 137.42 | 141.1 | 37.48 | 72.94 | 60.1 | 85.2 | 50.46 | 101.09 | 39.85 | 109.01 | 30.7 | 128.91 |
lcl|VRMN01000001.1_cds_KAA8500056.1_9009 (KAA8500056) | 119.97 | 243.57 | 278.47 | 153.44 | 153.65 | 151.74 | 152.04 | 136.05 | 177.71 | 151.26 | 227.2 | 109.27 | 244.93 |
lcl|VRMN01000002.1_cds_KAA8496428.1_157 (KAA8496428) | 4.4 | 18.38 | 19.6 | 6.33 | 11.79 | 7.94 | 7.42 | 7.16 | 11.95 | 5.86 | 13.6 | 3.06 | 19.26 |
lcl|VRMN01000002.1_cds_KAA8496430.1_159 (KAA8496430) | 109.36 | 142.2 | 157.35 | 115.15 | 122.14 | 76.41 | 121.59 | 65.54 | 125.0 | 87.6 | 143.33 | 54.11 | 133.97 |
lcl|VRMN01000002.1_cds_KAA8496431.1_160 (KAA8496431) | 64.83 | 103.26 | 104.27 | 74.13 | 77.69 | 63.09 | 84.29 | 55.79 | 96.3 | 68.34 | 114.29 | 43.49 | 104.98 |
lcl|VRMN01000002.1_cds_KAA8496480.1_209 (KAA8496480) | 5.4 | 27.99 | 28.88 | 11.6 | 15.09 | 16.51 | 14.96 | 16.5 | 25.16 | 10.36 | 28.93 | 6.39 | 37.09 |
lcl|VRMN01000002.1_cds_KAA8496708.1_437 (KAA8496708) | 116.95 | 390.94 | 320.37 | 236.84 | 372.72 | 226.69 | 339.81 | 246.56 | 391.21 | 288.55 | 453.37 | 175.53 | 428.7 |
lcl|VRMN01000002.1_cds_KAA8496736.1_465 (KAA8496736) | 20.65 | 45.94 | 44.84 | 30.04 | 22.19 | 29.34 | 25.48 | 30.85 | 32.31 | 29.42 | 33.83 | 20.65 | 38.4 |
lcl|VRMN01000002.1_cds_KAA8496737.1_466 (KAA8496737) | 5.91 | 48.71 | 44.07 | 15.66 | 24.49 | 24.6 | 29.3 | 23.79 | 39.07 | 20.63 | 38.28 | 14.27 | 43.14 |
lcl|VRMN01000002.1_cds_KAA8496833.1_562 (KAA8496833) | 7.12 | 13.76 | 12.21 | 10.46 | 11.92 | 11.51 | 10.0 | 10.23 | 13.91 | 10.0 | 12.36 | 7.66 | 16.6 |
lcl|VRMN01000002.1_cds_KAA8496903.1_632 (KAA8496903) | 11.25 | 21.87 | 22.74 | 15.87 | 18.68 | 22.07 | 17.11 | 19.36 | 22.07 | 17.44 | 23.74 | 13.41 | 28.74 |
lcl|VRMN01000002.1_cds_KAA8496940.1_669 (KAA8496940) | 20.83 | 70.89 | 70.66 | 33.27 | 55.85 | 43.57 | 59.25 | 44.03 | 72.64 | 26.37 | 75.26 | 19.04 | 86.84 |
lcl|VRMN01000002.1_cds_KAA8497047.1_776 (KAA8497047) | 7.67 | 26.31 | 31.19 | 11.48 | 18.0 | 15.47 | 14.29 | 14.33 | 23.42 | 11.79 | 30.61 | 8.1 | 37.53 |
lcl|VRMN01000002.1_cds_KAA8497048.1_777 (KAA8497048) | 13.28 | 39.66 | 41.93 | 22.82 | 23.19 | 33.28 | 21.53 | 29.97 | 31.29 | 25.53 | 37.02 | 23.88 | 44.1 |
lcl|VRMN01000002.1_cds_KAA8497263.1_992 (KAA8497263) | 98.32 | 138.95 | 156.02 | 130.48 | 139.68 | 124.14 | 129.61 | 131.54 | 138.55 | 136.6 | 169.27 | 93.42 | 177.24 |
lcl|VRMN01000002.1_cds_KAA8497265.1_994 (KAA8497265) | 8.3 | 19.01 | 18.67 | 12.0 | 13.46 | 14.94 | 14.95 | 13.51 | 18.98 | 12.16 | 18.71 | 9.78 | 22.21 |
lcl|VRMN01000002.1_cds_KAA8497329.1_1058 (KAA8497329) | 18.76 | 68.5 | 69.28 | 23.62 | 40.39 | 22.31 | 32.0 | 18.12 | 46.87 | 15.02 | 65.73 | 9.25 | 70.47 |
lcl|VRMN01000002.1_cds_KAA8497353.1_1082 (KAA8497353) | 9.05 | 23.95 | 26.57 | 15.99 | 17.08 | 22.67 | 16.45 | 21.12 | 27.64 | 16.05 | 34.47 | 11.52 | 42.05 |
lcl|VRMN01000003.1_cds_KAA8495247.1_1245 (KAA8495247) | 12.19 | 38.55 | 41.49 | 19.92 | 21.25 | 31.15 | 12.19 | 31.16 | 18.98 | 23.41 | 25.01 | 18.23 | 39.41 |
lcl|VRMN01000003.1_cds_KAA8495652.1_1650 (KAA8495652) | 3.04 | 10.83 | 12.71 | 4.88 | 8.15 | 5.88 | 5.77 | 4.83 | 10.13 | 3.51 | 14.63 | 1.91 | 19.09 |
lcl|VRMN01000003.1_cds_KAA8495696.1_1694 (KAA8495696) | 7.75 | 37.1 | 40.0 | 20.61 | 17.03 | 33.34 | 14.72 | 29.47 | 29.1 | 26.25 | 46.85 | 16.82 | 60.4 |
lcl|VRMN01000003.1_cds_KAA8495806.1_1804 (KAA8495806) | 12.79 | 20.57 | 17.82 | 16.46 | 16.67 | 17.8 | 12.06 | 16.45 | 16.72 | 15.3 | 15.15 | 13.29 | 16.29 |
lcl|VRMN01000003.1_cds_KAA8495921.1_1919 (KAA8495921) | 11.78 | 72.46 | 76.49 | 46.82 | 78.18 | 58.61 | 65.63 | 65.3 | 75.09 | 61.01 | 78.23 | 38.81 | 81.27 |
lcl|VRMN01000003.1_cds_KAA8495934.1_1932 (KAA8495934) | 24.26 | 75.82 | 85.18 | 40.05 | 44.18 | 54.47 | 51.6 | 43.88 | 68.22 | 39.02 | 85.66 | 28.63 | 106.08 |
lcl|VRMN01000003.1_cds_KAA8496214.1_2212 (KAA8496214) | 20.34 | 75.51 | 99.28 | 43.7 | 46.56 | 51.47 | 44.45 | 47.69 | 51.49 | 49.58 | 71.74 | 31.41 | 88.93 |
lcl|VRMN01000003.1_cds_KAA8496216.1_2214 (KAA8496216) | 23.3 | 41.58 | 39.16 | 27.72 | 32.38 | 34.49 | 24.68 | 26.05 | 35.63 | 25.98 | 46.69 | 15.72 | 59.84 |
lcl|VRMN01000004.1_cds_KAA8494629.1_3159 (KAA8494629) | 19.62 | 83.24 | 84.52 | 45.78 | 46.79 | 48.56 | 56.31 | 44.51 | 66.38 | 47.74 | 77.89 | 32.06 | 82.48 |
lcl|VRMN01000004.1_cds_KAA8494728.1_3258 (KAA8494728) | 11.63 | 28.04 | 32.52 | 14.7 | 20.99 | 19.49 | 16.07 | 19.26 | 22.91 | 14.22 | 24.24 | 14.37 | 33.4 |
lcl|VRMN01000004.1_cds_KAA8494990.1_3520 (KAA8494990) | 185.73 | 387.62 | 404.78 | 169.03 | 200.38 | 260.56 | 246.25 | 240.2 | 378.49 | 116.96 | 453.7 | 119.12 | 569.4 |
lcl|VRMN01000004.1_cds_KAA8495008.1_3538 (KAA8495008) | 21.42 | 98.8 | 87.35 | 37.12 | 44.76 | 64.7 | 50.91 | 61.44 | 71.74 | 37.69 | 76.33 | 36.29 | 93.86 |
lcl|VRMN01000004.1_cds_KAA8495013.1_3543 (KAA8495013) | 17.82 | 22.83 | 19.49 | 13.83 | 15.44 | 13.26 | 16.52 | 11.98 | 22.44 | 11.46 | 27.69 | 9.38 | 31.34 |
lcl|VRMN01000004.1_cds_KAA8495015.1_3545 (KAA8495015) | 39.34 | 95.73 | 101.2 | 66.91 | 53.05 | 75.89 | 49.11 | 69.43 | 70.68 | 63.46 | 90.91 | 43.2 | 114.3 |
lcl|VRMN01000004.1_cds_KAA8495179.1_3709 (KAA8495179) | 33.93 | 47.57 | 48.64 | 45.64 | 34.16 | 46.2 | 35.25 | 46.98 | 44.43 | 54.98 | 51.39 | 40.15 | 57.68 |
lcl|VRMN01000005.1_cds_KAA8494074.1_3938 (KAA8494074) | 20.14 | 45.92 | 57.98 | 43.73 | 54.55 | 47.79 | 48.27 | 47.38 | 48.58 | 40.01 | 55.32 | 31.78 | 47.09 |
lcl|VRMN01000005.1_cds_KAA8494250.1_4114 (KAA8494250) | 44.96 | 86.31 | 104.13 | 54.33 | 54.76 | 42.47 | 45.99 | 35.76 | 56.8 | 39.85 | 76.19 | 23.79 | 74.04 |
lcl|VRMN01000005.1_cds_KAA8494275.1_4139 (KAA8494275) | 14.12 | 39.31 | 37.84 | 19.72 | 20.74 | 26.77 | 19.06 | 24.68 | 32.8 | 18.26 | 34.23 | 15.27 | 40.51 |
lcl|VRMN01000005.1_cds_KAA8494287.1_4151 (KAA8494287) | 6.27 | 14.0 | 12.52 | 9.95 | 9.85 | 13.97 | 9.32 | 11.71 | 9.36 | 11.07 | 11.47 | 9.16 | 14.02 |
lcl|VRMN01000005.1_cds_KAA8494317.1_4181 (KAA8494317) | 65.29 | 109.13 | 131.61 | 92.35 | 100.98 | 82.79 | 108.12 | 77.81 | 123.32 | 82.72 | 167.9 | 40.54 | 158.54 |
lcl|VRMN01000006.1_cds_KAA8493488.1_4250 (KAA8493488) | 42.38 | 127.08 | 121.26 | 48.99 | 74.22 | 61.46 | 78.01 | 63.52 | 91.39 | 56.78 | 106.13 | 56.28 | 125.41 |
lcl|VRMN01000006.1_cds_KAA8493606.1_4368 (KAA8493606) | 15.63 | 28.98 | 30.48 | 15.32 | 16.67 | 17.36 | 14.06 | 15.0 | 19.66 | 12.33 | 24.59 | 8.96 | 28.08 |
lcl|VRMN01000006.1_cds_KAA8493611.1_4373 (KAA8493611) | 21.65 | 79.8 | 81.65 | 45.59 | 72.08 | 56.25 | 77.12 | 58.47 | 92.42 | 49.09 | 93.11 | 45.82 | 96.87 |
lcl|VRMN01000006.1_cds_KAA8493759.1_4521 (KAA8493759) | 77.64 | 197.33 | 188.97 | 148.77 | 172.71 | 171.93 | 167.13 | 186.2 | 185.21 | 201.1 | 207.32 | 175.88 | 212.66 |
lcl|VRMN01000007.1_cds_KAA8493416.1_9717 (KAA8493416) | 4.05 | 16.69 | 16.1 | 7.38 | 12.18 | 9.56 | 13.23 | 9.22 | 17.22 | 6.56 | 20.25 | 3.92 | 25.08 |
lcl|VRMN01000008.1_cds_KAA8492712.1_2448 (KAA8492712) | 29.87 | 112.94 | 121.21 | 39.67 | 63.86 | 56.03 | 63.72 | 53.62 | 83.11 | 34.57 | 80.56 | 30.7 | 99.59 |
lcl|VRMN01000008.1_cds_KAA8492741.1_2477 (KAA8492741) | 23.4 | 37.66 | 35.18 | 31.63 | 29.89 | 37.62 | 26.82 | 38.5 | 28.59 | 32.67 | 25.93 | 31.54 | 34.88 |
lcl|VRMN01000008.1_cds_KAA8492824.1_2560 (KAA8492824) | 19.6 | 45.84 | 49.47 | 19.95 | 30.47 | 28.06 | 27.03 | 22.01 | 41.56 | 14.18 | 44.98 | 10.03 | 58.35 |
lcl|VRMN01000008.1_cds_KAA8492845.1_2581 (KAA8492845) | 15.03 | 34.58 | 35.2 | 23.57 | 21.06 | 30.47 | 22.3 | 29.92 | 27.71 | 23.24 | 30.49 | 21.44 | 35.49 |
lcl|VRMN01000008.1_cds_KAA8493052.1_2788 (KAA8493052) | 4.06 | 43.13 | 45.57 | 10.07 | 17.15 | 16.22 | 24.21 | 14.5 | 34.29 | 11.13 | 42.24 | 7.0 | 48.07 |
lcl|VRMN01000008.1_cds_KAA8493059.1_2795 (KAA8493059) | 13.12 | 27.26 | 27.82 | 17.06 | 21.64 | 18.75 | 20.24 | 18.23 | 26.38 | 15.84 | 29.2 | 14.11 | 35.36 |
lcl|VRMN01000009.1_cds_KAA8492380.1_9073 (KAA8492380) | 9.6 | 34.67 | 34.66 | 14.17 | 20.0 | 15.92 | 19.82 | 13.73 | 25.75 | 11.14 | 33.55 | 5.31 | 37.88 |
lcl|VRMN01000009.1_cds_KAA8492679.1_9372 (KAA8492679) | 42.84 | 62.92 | 76.51 | 68.22 | 43.38 | 54.86 | 57.75 | 39.63 | 66.95 | 55.01 | 79.52 | 36.83 | 71.02 |
lcl|VRMN01000009.1_cds_KAA8492680.1_9373 (KAA8492680) | 14.03 | 49.4 | 47.17 | 22.7 | 20.53 | 26.51 | 42.14 | 24.47 | 45.33 | 27.17 | 55.07 | 16.81 | 60.54 |
lcl|VRMN01000010.1_cds_KAA8492187.1_5370 (KAA8492187) | 20.62 | 29.09 | 26.96 | 22.84 | 25.78 | 25.52 | 29.76 | 23.81 | 23.48 | 22.74 | 23.87 | 19.44 | 26.72 |
lcl|VRMN01000013.1_cds_KAA8491440.1_6250 (KAA8491440) | 71.5 | 174.49 | 185.04 | 90.34 | 92.68 | 87.43 | 111.95 | 85.96 | 135.22 | 67.85 | 141.65 | 45.94 | 168.14 |
lcl|VRMN01000016.1_cds_KAA8491021.1_9778 (KAA8491021) | 21.96 | 28.6 | 25.38 | 30.68 | 23.25 | 33.15 | 31.16 | 29.81 | 29.43 | 30.86 | 27.18 | 27.0 | 32.76 |
lcl|VRMN01000019.1_cds_KAA8490765.1_6021 (KAA8490765) | 7.73 | 19.17 | 22.36 | 10.93 | 13.12 | 13.88 | 10.23 | 11.21 | 21.03 | 7.79 | 23.6 | 4.89 | 24.23 |
lcl|VRMN01000019.1_cds_KAA8490779.1_6035 (KAA8490779) | 35.71 | 60.55 | 63.47 | 45.51 | 46.57 | 46.34 | 43.99 | 43.06 | 61.34 | 37.96 | 72.44 | 26.66 | 81.06 |
lcl|VRMN01000020.1_cds_KAA8490665.1_4707 (KAA8490665) | 36.44 | 40.31 | 36.78 | 39.41 | 36.52 | 40.85 | 39.31 | 41.72 | 44.62 | 41.94 | 39.82 | 48.26 | 45.68 |
lcl|VRMN01000020.1_cds_KAA8490685.1_4727 (KAA8490685) | 34.73 | 53.92 | 46.23 | 44.98 | 47.42 | 53.22 | 45.97 | 48.62 | 48.41 | 51.09 | 48.79 | 44.67 | 53.08 |
lcl|VRMN01000021.1_cds_KAA8490609.1_5708 (KAA8490609) | 33.7 | 33.63 | 30.05 | 35.71 | 29.84 | 35.1 | 36.11 | 37.91 | 38.73 | 36.49 | 33.42 | 41.69 | 35.15 |
lcl|VRMN01000023.1_cds_KAA8490554.1_5920 (KAA8490554) | 23.49 | 24.61 | 23.72 | 27.24 | 21.88 | 22.85 | 22.38 | 15.16 | 26.64 | 18.19 | 35.21 | 10.91 | 37.76 |
lcl|VRMN01000031.1_cds_KAA8490357.1_5747 (KAA8490357) | 37.36 | 82.07 | 94.75 | 47.04 | 48.97 | 68.21 | 53.14 | 64.06 | 66.37 | 46.71 | 64.66 | 46.71 | 83.03 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)