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Gene | WT,12hL12hD,Log,1h Dark | WT,12hL12hD,Log,1h Light | WT,12hL12hD,Log,1h Light d2 | WT,12hL12hD,Log,3h Dark | WT,12hL12hD,Log,3h Light | WT,12hL12hD,Log,5h Dark | WT,12hL12hD,Log,5h Light | WT,12hL12hD,Log,7h Dark | WT,12hL12hD,Log,7h Light | WT,12hL12hD,Log,9h Dark | WT,12hL12hD,Log,9h Light | WT,12hL12hD,Log,11h Dark | WT,12hL12hD,Log,11h Light |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497643.1_6596 (KAA8497643) | 9.36 | 35.07 | 34.53 | 16.64 | 19.83 | 19.62 | 15.62 | 19.38 | 20.18 | 23.53 | 24.18 | 19.04 | 23.98 |
lcl|VRMN01000001.1_cds_KAA8497646.1_6599 (KAA8497646) | 33.13 | 46.68 | 47.69 | 27.4 | 28.41 | 33.0 | 19.75 | 30.33 | 25.11 | 22.97 | 25.26 | 23.3 | 36.28 |
lcl|VRMN01000001.1_cds_KAA8497677.1_6630 (KAA8497677) | 5.58 | 16.64 | 19.1 | 11.91 | 13.61 | 14.74 | 9.92 | 14.73 | 11.32 | 13.65 | 10.93 | 11.48 | 12.8 |
lcl|VRMN01000001.1_cds_KAA8497729.1_6682 (KAA8497729) | 136.12 | 137.48 | 117.85 | 233.55 | 101.55 | 246.87 | 67.76 | 197.67 | 91.47 | 149.95 | 101.53 | 149.7 | 114.08 |
lcl|VRMN01000001.1_cds_KAA8497759.1_6712 (KAA8497759) | 29.69 | 83.44 | 69.75 | 48.32 | 40.41 | 72.94 | 38.95 | 76.75 | 49.25 | 53.15 | 42.54 | 72.56 | 55.82 |
lcl|VRMN01000001.1_cds_KAA8497906.1_6859 (KAA8497906) | 53.49 | 92.09 | 93.48 | 75.57 | 68.04 | 97.05 | 42.82 | 93.91 | 62.25 | 76.92 | 55.15 | 110.02 | 74.06 |
lcl|VRMN01000001.1_cds_KAA8498065.1_7018 (KAA8498065) | 8.44 | 42.01 | 43.13 | 15.62 | 24.64 | 21.31 | 24.51 | 19.51 | 25.62 | 21.37 | 27.25 | 16.06 | 27.61 |
lcl|VRMN01000001.1_cds_KAA8498190.1_7143 (KAA8498190) | 7.67 | 17.07 | 18.97 | 17.29 | 10.65 | 16.72 | 8.71 | 15.55 | 14.49 | 20.09 | 16.31 | 11.74 | 21.18 |
lcl|VRMN01000001.1_cds_KAA8498412.1_7365 (KAA8498412) | 70.14 | 105.83 | 142.32 | 65.09 | 59.34 | 88.23 | 59.76 | 77.42 | 64.06 | 64.96 | 82.73 | 57.85 | 99.52 |
lcl|VRMN01000001.1_cds_KAA8498519.1_7472 (KAA8498519) | 3.19 | 85.85 | 76.67 | 11.42 | 27.89 | 30.9 | 12.87 | 41.31 | 15.07 | 38.35 | 20.68 | 36.53 | 42.72 |
lcl|VRMN01000001.1_cds_KAA8498576.1_7529 (KAA8498576) | 24.54 | 159.81 | 141.45 | 55.19 | 38.83 | 74.41 | 32.91 | 80.42 | 40.45 | 100.55 | 46.64 | 77.73 | 70.47 |
lcl|VRMN01000001.1_cds_KAA8498584.1_7537 (KAA8498584) | 277.04 | 126.22 | 171.16 | 484.08 | 83.42 | 482.29 | 137.84 | 372.17 | 160.83 | 411.88 | 210.64 | 306.37 | 211.55 |
lcl|VRMN01000001.1_cds_KAA8498675.1_7628 (KAA8498675) | 26.09 | 67.53 | 59.03 | 39.03 | 54.28 | 63.45 | 36.72 | 72.71 | 43.89 | 61.41 | 36.82 | 79.12 | 49.92 |
lcl|VRMN01000001.1_cds_KAA8498762.1_7715 (KAA8498762) | 39.78 | 54.91 | 61.36 | 53.19 | 57.6 | 76.86 | 41.51 | 64.3 | 49.23 | 37.07 | 50.58 | 42.71 | 59.51 |
lcl|VRMN01000001.1_cds_KAA8498808.1_7761 (KAA8498808) | 73.04 | 202.32 | 184.74 | 102.65 | 103.97 | 175.63 | 95.27 | 192.98 | 120.02 | 140.96 | 92.71 | 217.16 | 122.93 |
lcl|VRMN01000001.1_cds_KAA8499419.1_8372 (KAA8499419) | 13.24 | 31.74 | 24.71 | 12.64 | 6.06 | 20.17 | 8.32 | 20.42 | 12.26 | 15.67 | 11.57 | 10.61 | 21.58 |
lcl|VRMN01000001.1_cds_KAA8499537.1_8490 (KAA8499537) | 55.34 | 84.78 | 76.8 | 58.45 | 81.45 | 56.03 | 50.79 | 47.73 | 57.8 | 57.7 | 71.33 | 39.08 | 76.16 |
lcl|VRMN01000001.1_cds_KAA8499596.1_8549 (KAA8499596) | 0.54 | 82.06 | 69.5 | 1.22 | 11.65 | 1.67 | 5.31 | 3.99 | 1.84 | 6.7 | 1.63 | 16.59 | 4.41 |
lcl|VRMN01000001.1_cds_KAA8499733.1_8686 (KAA8499733) | 15.11 | 107.55 | 112.44 | 46.13 | 75.91 | 67.77 | 57.26 | 66.75 | 57.72 | 83.65 | 60.23 | 69.76 | 58.51 |
lcl|VRMN01000001.1_cds_KAA8499931.1_8884 (KAA8499931) | 77.63 | 98.79 | 127.39 | 150.12 | 163.57 | 235.22 | 107.71 | 233.02 | 115.4 | 152.57 | 128.6 | 171.14 | 128.74 |
lcl|VRMN01000001.1_cds_KAA8499941.1_8894 (KAA8499941) | 33.77 | 86.71 | 76.15 | 45.13 | 40.04 | 57.17 | 40.79 | 62.14 | 44.64 | 57.96 | 36.71 | 75.46 | 47.87 |
lcl|VRMN01000002.1_cds_KAA8496420.1_149 (KAA8496420) | 16.7 | 68.29 | 79.17 | 29.33 | 29.09 | 35.92 | 26.38 | 36.68 | 30.68 | 44.72 | 38.51 | 29.1 | 51.1 |
lcl|VRMN01000002.1_cds_KAA8496464.1_193 (KAA8496464) | 8.81 | 30.97 | 32.51 | 10.64 | 17.3 | 15.18 | 10.74 | 14.87 | 12.89 | 13.03 | 11.21 | 12.72 | 18.08 |
lcl|VRMN01000002.1_cds_KAA8496487.1_216 (KAA8496487) | 14.23 | 69.77 | 72.1 | 25.21 | 33.61 | 47.04 | 30.61 | 45.12 | 32.13 | 33.21 | 31.72 | 36.41 | 40.8 |
lcl|VRMN01000002.1_cds_KAA8496540.1_269 (KAA8496540) | 24.78 | 75.38 | 66.9 | 41.01 | 55.87 | 59.71 | 48.88 | 65.08 | 59.49 | 50.83 | 55.57 | 58.57 | 61.97 |
lcl|VRMN01000002.1_cds_KAA8496590.1_319 (KAA8496590) | 28.0 | 73.29 | 69.96 | 38.36 | 43.81 | 49.11 | 35.37 | 53.83 | 41.46 | 42.83 | 34.81 | 43.07 | 44.06 |
lcl|VRMN01000002.1_cds_KAA8496927.1_656 (KAA8496927) | 13.78 | 56.77 | 46.39 | 25.89 | 27.21 | 47.36 | 18.1 | 53.56 | 21.76 | 40.67 | 36.78 | 50.07 | 54.2 |
lcl|VRMN01000002.1_cds_KAA8496928.1_657 (KAA8496928) | 3.93 | 30.18 | 27.18 | 10.78 | 11.96 | 21.84 | 5.47 | 26.76 | 7.61 | 24.97 | 7.76 | 25.02 | 12.65 |
lcl|VRMN01000002.1_cds_KAA8496943.1_672 (KAA8496943) | 16.84 | 27.44 | 22.43 | 18.29 | 18.96 | 17.05 | 15.99 | 16.66 | 17.55 | 17.43 | 21.62 | 12.39 | 18.01 |
lcl|VRMN01000002.1_cds_KAA8497011.1_740 (KAA8497011) | 12.43 | 53.65 | 53.46 | 32.85 | 39.09 | 39.3 | 50.73 | 48.72 | 44.36 | 67.16 | 44.94 | 65.15 | 39.12 |
lcl|VRMN01000002.1_cds_KAA8497045.1_774 (KAA8497045) | 13.39 | 74.16 | 59.08 | 20.26 | 34.94 | 27.58 | 24.96 | 31.45 | 25.72 | 34.02 | 17.68 | 42.11 | 22.14 |
lcl|VRMN01000002.1_cds_KAA8497104.1_833 (KAA8497104) | 29.05 | 111.38 | 93.21 | 50.82 | 40.14 | 78.72 | 40.5 | 88.99 | 42.33 | 74.84 | 50.9 | 85.35 | 57.62 |
lcl|VRMN01000002.1_cds_KAA8497357.1_1086 (KAA8497357) | 23.06 | 29.26 | 24.37 | 23.48 | 21.31 | 23.84 | 30.21 | 24.32 | 38.03 | 31.87 | 34.32 | 44.11 | 36.02 |
lcl|VRMN01000002.1_cds_KAA8497416.1_1145 (KAA8497416) | 32.33 | 171.18 | 137.88 | 49.64 | 40.93 | 66.6 | 32.32 | 60.42 | 40.24 | 59.32 | 42.58 | 40.66 | 54.98 |
lcl|VRMN01000002.1_cds_KAA8497444.1_1173 (KAA8497444) | 11.17 | 24.55 | 18.76 | 15.6 | 13.57 | 16.39 | 21.92 | 17.82 | 23.78 | 28.24 | 24.87 | 23.34 | 21.39 |
lcl|VRMN01000003.1_cds_KAA8495244.1_1242 (KAA8495244) | 15.1 | 35.84 | 31.45 | 17.78 | 21.91 | 18.4 | 18.33 | 18.59 | 24.57 | 18.86 | 19.5 | 12.92 | 23.11 |
lcl|VRMN01000003.1_cds_KAA8495333.1_1331 (KAA8495333) | 14.46 | 35.52 | 33.34 | 28.44 | 24.36 | 40.93 | 23.95 | 41.42 | 29.34 | 37.1 | 27.08 | 45.68 | 35.52 |
lcl|VRMN01000003.1_cds_KAA8495415.1_1413 (KAA8495415) | 28.38 | 120.72 | 113.83 | 42.4 | 40.84 | 63.09 | 40.72 | 70.75 | 40.76 | 59.81 | 27.95 | 83.67 | 43.61 |
lcl|VRMN01000003.1_cds_KAA8495436.1_1434 (KAA8495436) | 10.26 | 17.03 | 17.85 | 13.93 | 20.0 | 16.98 | 11.34 | 16.85 | 12.61 | 15.8 | 9.85 | 14.97 | 14.24 |
lcl|VRMN01000003.1_cds_KAA8495629.1_1627 (KAA8495629) | 46.82 | 101.16 | 78.89 | 63.31 | 70.04 | 104.17 | 61.79 | 99.28 | 75.19 | 73.16 | 54.47 | 87.75 | 79.55 |
lcl|VRMN01000003.1_cds_KAA8495698.1_1696 (KAA8495698) | 14.09 | 34.52 | 37.0 | 22.42 | 18.46 | 23.49 | 16.8 | 20.96 | 18.86 | 17.25 | 17.14 | 15.88 | 22.6 |
lcl|VRMN01000003.1_cds_KAA8495728.1_1726 (KAA8495728) | 6.81 | 34.72 | 34.87 | 13.52 | 24.09 | 22.48 | 21.32 | 24.21 | 28.68 | 19.31 | 23.86 | 19.44 | 29.08 |
lcl|VRMN01000003.1_cds_KAA8495851.1_1849 (KAA8495851) | 26.62 | 53.46 | 52.29 | 41.74 | 39.41 | 61.13 | 35.2 | 70.64 | 45.19 | 56.3 | 36.94 | 72.59 | 49.16 |
lcl|VRMN01000003.1_cds_KAA8496086.1_2084 (KAA8496086) | 66.7 | 189.01 | 184.36 | 71.21 | 62.42 | 110.12 | 63.27 | 121.31 | 74.89 | 98.59 | 72.82 | 105.76 | 115.32 |
lcl|VRMN01000004.1_cds_KAA8494382.1_2912 (KAA8494382) | 37.09 | 95.02 | 95.44 | 55.7 | 41.64 | 65.63 | 50.03 | 67.84 | 61.19 | 65.39 | 60.55 | 62.47 | 76.71 |
lcl|VRMN01000004.1_cds_KAA8494401.1_2931 (KAA8494401) | 16.3 | 71.23 | 64.21 | 23.89 | 40.07 | 30.54 | 36.98 | 34.4 | 34.47 | 48.95 | 28.15 | 50.87 | 34.14 |
lcl|VRMN01000004.1_cds_KAA8494411.1_2941 (KAA8494411) | 23.52 | 42.83 | 42.37 | 36.67 | 22.71 | 40.17 | 22.45 | 43.7 | 22.42 | 44.8 | 20.83 | 48.84 | 28.74 |
lcl|VRMN01000004.1_cds_KAA8494630.1_3160 (KAA8494630) | 45.98 | 101.03 | 101.9 | 57.23 | 66.57 | 74.94 | 56.86 | 88.27 | 66.5 | 79.62 | 58.15 | 72.11 | 83.85 |
lcl|VRMN01000004.1_cds_KAA8494856.1_3386 (KAA8494856) | 12.98 | 37.6 | 54.96 | 13.63 | 25.6 | 25.45 | 20.47 | 31.37 | 23.85 | 26.92 | 21.57 | 27.94 | 23.07 |
lcl|VRMN01000004.1_cds_KAA8495022.1_3552 (KAA8495022) | 126.74 | 764.19 | 762.83 | 319.03 | 408.13 | 646.72 | 391.34 | 586.26 | 333.83 | 637.37 | 230.59 | 789.9 | 379.16 |
lcl|VRMN01000005.1_cds_KAA8494025.1_3889 (KAA8494025) | 16.69 | 48.24 | 44.59 | 26.91 | 25.61 | 29.01 | 26.22 | 33.03 | 28.08 | 33.98 | 28.32 | 31.52 | 39.65 |
lcl|VRMN01000005.1_cds_KAA8494165.1_4029 (KAA8494165) | 40.14 | 58.55 | 57.13 | 43.12 | 36.03 | 48.11 | 28.94 | 49.1 | 28.79 | 41.89 | 26.66 | 38.09 | 36.47 |
lcl|VRMN01000006.1_cds_KAA8493592.1_4354 (KAA8493592) | 45.49 | 420.69 | 458.75 | 202.79 | 133.38 | 327.02 | 105.83 | 314.57 | 108.81 | 229.75 | 145.83 | 249.18 | 189.19 |
lcl|VRMN01000006.1_cds_KAA8493625.1_4387 (KAA8493625) | 10.58 | 77.32 | 73.17 | 27.78 | 24.46 | 37.87 | 28.83 | 37.93 | 23.97 | 40.63 | 25.4 | 36.09 | 31.86 |
lcl|VRMN01000006.1_cds_KAA8493626.1_4388 (KAA8493626) | 7.75 | 48.03 | 43.38 | 24.97 | 14.77 | 32.17 | 14.38 | 40.1 | 16.45 | 53.72 | 12.57 | 51.15 | 21.38 |
lcl|VRMN01000007.1_cds_KAA8493248.1_9549 (KAA8493248) | 4.49 | 7.85 | 7.44 | 5.15 | 5.47 | 5.08 | 5.42 | 4.3 | 5.32 | 4.88 | 6.4 | 3.65 | 6.05 |
lcl|VRMN01000007.1_cds_KAA8493253.1_9554 (KAA8493253) | 20.15 | 65.99 | 52.76 | 32.67 | 35.97 | 41.67 | 36.1 | 38.49 | 32.89 | 35.87 | 28.48 | 35.21 | 36.7 |
lcl|VRMN01000008.1_cds_KAA8492715.1_2451 (KAA8492715) | 6.52 | 51.97 | 36.64 | 12.08 | 13.15 | 12.2 | 12.23 | 16.26 | 9.92 | 17.94 | 11.53 | 17.77 | 17.69 |
lcl|VRMN01000008.1_cds_KAA8492789.1_2525 (KAA8492789) | 23.63 | 21.04 | 30.65 | 37.87 | 17.95 | 47.39 | 14.84 | 43.53 | 18.39 | 27.56 | 17.06 | 28.67 | 23.28 |
lcl|VRMN01000008.1_cds_KAA8493060.1_2796 (KAA8493060) | 13.11 | 29.93 | 32.98 | 19.84 | 16.4 | 24.91 | 18.48 | 23.65 | 19.78 | 23.31 | 19.32 | 21.06 | 21.26 |
lcl|VRMN01000009.1_cds_KAA8492585.1_9278 (KAA8492585) | 21.52 | 67.46 | 67.78 | 31.51 | 31.77 | 38.8 | 32.67 | 38.27 | 31.48 | 43.49 | 27.29 | 42.71 | 36.11 |
lcl|VRMN01000009.1_cds_KAA8492600.1_9293 (KAA8492600) | 39.94 | 173.86 | 220.59 | 132.03 | 71.0 | 245.85 | 67.84 | 262.04 | 79.48 | 146.58 | 87.3 | 186.62 | 117.07 |
lcl|VRMN01000011.1_cds_KAA8491807.1_4815 (KAA8491807) | 92.47 | 83.92 | 135.84 | 181.09 | 89.08 | 191.99 | 87.9 | 162.14 | 104.21 | 164.45 | 144.38 | 133.48 | 132.17 |
lcl|VRMN01000011.1_cds_KAA8491850.1_4858 (KAA8491850) | 27.41 | 54.49 | 44.79 | 19.55 | 21.71 | 19.97 | 26.61 | 19.68 | 30.08 | 22.18 | 19.23 | 20.68 | 29.64 |
lcl|VRMN01000011.1_cds_KAA8491858.1_4866 (KAA8491858) | 61.05 | 157.76 | 141.19 | 84.93 | 76.77 | 108.74 | 94.95 | 111.67 | 90.97 | 102.29 | 88.45 | 102.73 | 96.34 |
lcl|VRMN01000012.1_cds_KAA8491712.1_5180 (KAA8491712) | 25.92 | 144.1 | 171.5 | 55.7 | 81.32 | 86.15 | 85.36 | 116.3 | 84.15 | 145.57 | 73.65 | 187.06 | 95.22 |
lcl|VRMN01000014.1_cds_KAA8491381.1_2382 (KAA8491381) | 5.68 | 23.9 | 19.71 | 10.7 | 13.07 | 8.92 | 10.62 | 8.72 | 13.75 | 11.76 | 12.85 | 8.29 | 18.05 |
lcl|VRMN01000015.1_cds_KAA8491226.1_5854 (KAA8491226) | 14.07 | 23.42 | 25.55 | 18.32 | 21.65 | 18.4 | 18.69 | 17.85 | 19.75 | 20.91 | 16.33 | 18.1 | 17.88 |
lcl|VRMN01000016.1_cds_KAA8491032.1_9789 (KAA8491032) | 30.02 | 77.6 | 70.76 | 54.57 | 45.44 | 76.76 | 56.0 | 79.75 | 63.04 | 74.1 | 49.03 | 74.61 | 67.11 |
lcl|VRMN01000016.1_cds_KAA8491131.1_9888 (KAA8491131) | 136.22 | 342.54 | 410.1 | 179.25 | 204.17 | 184.85 | 183.02 | 206.59 | 184.51 | 340.83 | 255.84 | 378.86 | 252.16 |
lcl|VRMN01000017.1_cds_KAA8490973.1_6176 (KAA8490973) | 6.67 | 108.2 | 127.54 | 30.18 | 24.02 | 57.57 | 31.38 | 67.78 | 45.0 | 67.02 | 61.1 | 60.05 | 89.04 |
lcl|VRMN01000017.1_cds_KAA8490974.1_6177 (KAA8490974) | 10.17 | 34.71 | 36.65 | 15.3 | 20.15 | 18.53 | 17.69 | 17.47 | 17.76 | 21.38 | 17.35 | 17.79 | 24.01 |
lcl|VRMN01000018.1_cds_KAA8490799.1_5571 (KAA8490799) | 33.97 | 115.25 | 116.47 | 70.41 | 51.74 | 82.75 | 69.73 | 80.76 | 70.33 | 87.41 | 75.38 | 68.75 | 95.37 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)