Heatmap: Cluster_12 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	WT,12hL12hD,Log,1h Dark	WT,12hL12hD,Log,1h Light	WT,12hL12hD,Log,1h Light d2	WT,12hL12hD,Log,3h Dark	WT,12hL12hD,Log,3h Light	WT,12hL12hD,Log,5h Dark	WT,12hL12hD,Log,5h Light	WT,12hL12hD,Log,7h Dark	WT,12hL12hD,Log,7h Light	WT,12hL12hD,Log,9h Dark	WT,12hL12hD,Log,9h Light	WT,12hL12hD,Log,11h Dark	WT,12hL12hD,Log,11h Light
lcl\|VRMN01000001.1_cds_KAA8497506.1_6459 (KAA8497506)	0.75	1.54	-	-0.55	-0.88	2.07	-	-	-0.84	0.16	-	-0.69	-0.55
lcl\|VRMN01000001.1_cds_KAA8497536.1_6489 (KAA8497536)	2.61	-	-	-	-	-	-	-	-	-	-	-	2.78
lcl\|VRMN01000001.1_cds_KAA8497593.1_6546 (KAA8497593)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000001.1_cds_KAA8498741.1_7694 (KAA8498741)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000001.1_cds_KAA8499342.1_8295 (KAA8499342)	-1.79	1.59	2.73	-1.93	-1.47	-3.28	-0.88	-3.77	-1.31	-3.36	-1.15	-3.9	-0.51
lcl\|VRMN01000001.1_cds_KAA8499347.1_8300 (KAA8499347)	2.45	-2.25	0.47	-	1.98	-	-0.68	-20.23	-	-0.43	-0.67	-	-
lcl\|VRMN01000001.1_cds_KAA8499365.1_8318 (KAA8499365)	1.65	1.56	-	-	-	-	-	-	-0.59	-	-0.71	-	2.5
lcl\|VRMN01000001.1_cds_KAA8499397.1_8350 (KAA8499397)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000001.1_cds_KAA8499400.1_8353 (KAA8499400)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000001.1_cds_KAA8499408.1_8361 (KAA8499408)	-	-	-	-	3.7	-	-	-	-	-	-	-	-
lcl\|VRMN01000001.1_cds_KAA8500069.1_9022 (KAA8500069)	-1.05	0.64	0.63	-0.54	0.45	-0.31	0.22	-0.36	0.05	-0.06	-0.28	-0.41	0.04
lcl\|VRMN01000002.1_cds_KAA8496273.1_2 (KAA8496273)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000002.1_cds_KAA8496274.1_3 (KAA8496274)	2.63	-	-	1.84	-	-	-	-	-	1.0	-	0.3	-
lcl\|VRMN01000002.1_cds_KAA8497381.1_1110 (KAA8497381)	-	-	-	-	-	0.75	-	-	-	2.42	0.78	2.09	-
lcl\|VRMN01000002.1_cds_KAA8497466.1_1195 (KAA8497466)	-	-	-	-	-	-	-	3.7	-	-	-	-	-
lcl\|VRMN01000003.1_cds_KAA8495458.1_1456 (KAA8495458)	-1.43	0.6	1.05	-1.11	-0.75	-1.53	0.04	-1.81	0.64	-1.59	1.19	-2.5	0.99
lcl\|VRMN01000003.1_cds_KAA8496122.1_2120 (KAA8496122)	0.3	-0.51	-	-0.22	-	-	-	1.85	1.23	-	-	-2.08	2.01
lcl\|VRMN01000004.1_cds_KAA8494421.1_2951 (KAA8494421)	-29.03	0.12	2.7	-0.44	-10.51	-0.89	-	-15.53	-26.9	-3.43	2.02	-7.1	-17.16
lcl\|VRMN01000004.1_cds_KAA8494498.1_3028 (KAA8494498)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000004.1_cds_KAA8494621.1_3151 (KAA8494621)	-	-	-	-	1.69	-	-	-	-	3.29	-	-	-
lcl\|VRMN01000004.1_cds_KAA8494832.1_3362 (KAA8494832)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000004.1_cds_KAA8494833.1_3363 (KAA8494833)	-	-	-	-	3.7	-	-	-	-	-	-	-	-
lcl\|VRMN01000004.1_cds_KAA8494878.1_3408 (KAA8494878)	-	-	-	-	3.7	-	-	-	-	-	-	-	-
lcl\|VRMN01000004.1_cds_KAA8495162.1_3692 (KAA8495162)	-0.68	0.08	-	-	1.51	0.86	-1.06	-	1.13	-1.04	0.01	0.37	0.27
lcl\|VRMN01000005.1_cds_KAA8494229.1_4093 (KAA8494229)	-	-	-	-	-	2.25	-	-	-	-	3.04	-	-
lcl\|VRMN01000005.1_cds_KAA8494232.1_4096 (KAA8494232)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000005.1_cds_KAA8494233.1_4097 (KAA8494233)	-	1.6	-	2.7	-	-	-	-	1.79	-	-	-	-
lcl\|VRMN01000005.1_cds_KAA8494234.1_4098 (KAA8494234)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000005.1_cds_KAA8494246.1_4110 (KAA8494246)	-2.07	-0.99	1.58	-4.13	-2.06	1.16	1.28	0.73	-1.1	-2.16	-6.52	0.69	-1.62
lcl\|VRMN01000005.1_cds_KAA8494358.1_4222 (KAA8494358)	0.97	-	-	-	-	1.39	-	-	-	3.01	-	-	-1.42
lcl\|VRMN01000006.1_cds_KAA8493497.1_4259 (KAA8493497)	-	-	-	-	2.63	-	-	-	-	-	-	-	2.77
lcl\|VRMN01000006.1_cds_KAA8493657.1_4419 (KAA8493657)	1.8	-	-	-	1.31	-	-	-	-	-	-	1.74	1.88
lcl\|VRMN01000007.1_cds_KAA8493111.1_9412 (KAA8493111)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000007.1_cds_KAA8493112.1_9413 (KAA8493112)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000007.1_cds_KAA8493273.1_9574 (KAA8493273)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000007.1_cds_KAA8493353.1_9654 (KAA8493353)	-	-	-	-	-	2.77	-	-	2.63	-	-	-	-
lcl\|VRMN01000007.1_cds_KAA8493437.1_9738 (KAA8493437)	-	3.7	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000007.1_cds_KAA8493446.1_9747 (KAA8493446)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000008.1_cds_KAA8492727.1_2463 (KAA8492727)	-25.4	-23.35	2.79	-10.4	-19.79	-9.67	2.6	-11.02	-13.19	-11.73	-10.34	-11.56	-11.4
lcl\|VRMN01000008.1_cds_KAA8492985.1_2721 (KAA8492985)	0.42	0.45	-	-	0.53	-	-	1.96	1.81	-	0.54	-	-
lcl\|VRMN01000008.1_cds_KAA8493085.1_2821 (KAA8493085)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000009.1_cds_KAA8492392.1_9085 (KAA8492392)	-	-	-	-	-	-	-	-	-	-	3.7	-	-
lcl\|VRMN01000009.1_cds_KAA8492398.1_9091 (KAA8492398)	-1.09	0.05	0.49	-0.72	0.95	0.01	-	-0.5	1.12	-0.15	-1.09	0.11	0.28
lcl\|VRMN01000010.1_cds_KAA8492347.1_5530 (KAA8492347)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000012.1_cds_KAA8491585.1_5053 (KAA8491585)	1.42	1.85	0.65	-	1.48	-	-	-	1.23	-	-	-	-
lcl\|VRMN01000013.1_cds_KAA8491546.1_6356 (KAA8491546)	-12.42	-10.19	2.04	-8.85	-17.88	-3.19	2.19	1.57	-15.02	-7.07	-6.6	0.32	-7.2
lcl\|VRMN01000014.1_cds_KAA8491275.1_2276 (KAA8491275)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000014.1_cds_KAA8491285.1_2286 (KAA8491285)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000014.1_cds_KAA8491318.1_2319 (KAA8491318)	1.73	0.07	-	-	-0.5	-0.94	-	-	-0.39	1.42	0.79	-0.32	0.54
lcl\|VRMN01000014.1_cds_KAA8491349.1_2350 (KAA8491349)	0.8	-	0.85	0.9	1.69	-	-	1.23	-	1.02	-	-	-
lcl\|VRMN01000014.1_cds_KAA8491350.1_2351 (KAA8491350)	2.11	-	-	-	-	-	-	-	-	3.12	-	-	-
lcl\|VRMN01000014.1_cds_KAA8491365.1_2366 (KAA8491365)	0.01	-	-0.06	-0.39	-0.68	0.04	-1.72	0.45	1.88	1.13	-0.61	-	-1.26
lcl\|VRMN01000015.1_cds_KAA8491146.1_5774 (KAA8491146)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000015.1_cds_KAA8491147.1_5775 (KAA8491147)	-	-	3.7	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000015.1_cds_KAA8491150.1_5778 (KAA8491150)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000015.1_cds_KAA8491181.1_5809 (KAA8491181)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000015.1_cds_KAA8491239.1_5867 (KAA8491239)	3.1	-	-	-	-	2.14	-	-	-	-	-	-	-
lcl\|VRMN01000018.1_cds_KAA8490791.1_5563 (KAA8490791)	-	-	-	2.46	-	-	-	-	-	-	-	2.9	-
lcl\|VRMN01000019.1_cds_KAA8490743.1_5999 (KAA8490743)	-	-	1.41	-	0.47	-	-	0.13	1.73	0.77	-	-	1.5
lcl\|VRMN01000019.1_cds_KAA8490749.1_6005 (KAA8490749)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000019.1_cds_KAA8490756.1_6012 (KAA8490756)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000020.1_cds_KAA8490657.1_4699 (KAA8490657)	-	-	-	3.7	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000021.1_cds_KAA8490624.1_5723 (KAA8490624)	-	-	-	-	-	-	3.7	-	-	-	-	-	-
lcl\|VRMN01000023.1_cds_KAA8490533.1_5899 (KAA8490533)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000024.1_cds_KAA8490501.1_4651 (KAA8490501)	-6.67	-14.61	2.62	-24.96	-9.27	-15.02	2.46	-1.36	-0.06	-19.55	-17.5	-17.83	-14.74
lcl\|VRMN01000029.1_cds_KAA8490404.1_6093 (KAA8490404)	-	-	-	-	-	-	-	3.7	-	-	-	-	-
lcl\|VRMN01000030.1_cds_KAA8490378.1_3735 (KAA8490378)	-	-	2.69	-	-	-	2.71	-	-	-	-	-	-
lcl\|VRMN01000031.1_cds_KAA8490362.1_5752 (KAA8490362)	2.5	-	-	-	-	-	-	-	-	-	-	-	2.87
lcl\|VRMN01000032.1_cds_KAA8490341.1_5683 (KAA8490341)	-	-	-	-	-	-	-	-	-	-	-	-	-
lcl\|VRMN01000035.1_cds_KAA8490300.1_6221 (KAA8490300)	-	2.81	0.96	-	-	2.01	-	-	-	-	-	-	-
lcl\|VRMN01000037.1_cds_KAA8490270.1_6403 (KAA8490270)	1.31	0.69	-	-	-0.06	-2.31	1.29	-	0.48	0.09	-	0.36	0.64
lcl\|VRMN01000038.1_cds_KAA8490261.1_2420 (KAA8490261)	-	-	-0.04	-	-	2.66	-0.81	-	0.75	-0.4	-	-	1.44
lcl\|VRMN01000044.1_cds_KAA8490224.1_6076 (KAA8490224)	-	-	-	-	-	-	-	-	-	3.7	-	-	-
lcl\|VRMN01000045.1_cds_KAA8490221.1_4685 (KAA8490221)	-	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.