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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cre01.g055000 (30789186) | 1.52 | 0.72 | -0.07 | -0.17 | -0.78 | -0.62 | -0.88 | -0.61 | -1.16 | -0.1 | -0.12 | -0.78 | -0.23 | -0.85 | -0.62 | -0.79 | -0.74 | -0.87 | -0.75 | -0.8 | -0.63 | 0.08 | 0.58 | 0.7 | 1.06 | 1.42 | 1.76 | 2.65 | 0.75 | 0.91 | 0.07 | 0.16 | 0.55 | -0.51 | -0.91 | -0.82 | -0.39 | 0.03 | -0.04 | 0.23 | 0.04 | 0.85 | 1.71 | 1.28 | 1.01 | 0.85 | 1.31 | 1.11 | 0.87 | 1.03 | 0.21 | 0.36 | 0.18 | 0.08 | -0.09 | -0.01 | 0.41 | 0.75 | 0.4 | 0.58 | 0.28 | -0.83 | -0.56 | -0.76 | -0.51 | -0.7 | -0.83 | -1.71 | -0.86 | -0.74 | -0.37 | -0.53 | -0.94 | -3.0 | -2.29 | -1.46 | -2.35 | -2.37 | -2.28 | -1.52 | -1.29 | -3.04 | -4.6 | -3.7 | -5.04 | -3.67 | -4.58 | 0.55 | 0.67 | -0.1 | -3.04 | -4.6 | -3.1 | -2.68 | -3.7 | -5.04 | -3.67 | -4.58 | -2.08 | 0.37 | 0.67 | -0.02 | 0.49 |
Cre16.g675100 (30777301) | -2.91 | -4.25 | -4.77 | -5.05 | -5.26 | -5.32 | -4.59 | -3.24 | -3.27 | -2.63 | -3.36 | -3.47 | -3.08 | -3.89 | -3.37 | -3.38 | -3.23 | -3.43 | -3.16 | -2.92 | -2.47 | -1.18 | -0.05 | 0.82 | 1.72 | 2.38 | 2.38 | 2.76 | -1.85 | -0.86 | -1.53 | -2.55 | -3.33 | 0.25 | 0.51 | 0.89 | 0.78 | 0.97 | 1.14 | 1.48 | 1.21 | 0.69 | 2.71 | 1.99 | 1.24 | 0.38 | 1.99 | 2.46 | 2.28 | 2.17 | -1.93 | 0.5 | 0.95 | -0.75 | -2.19 | 0.33 | 1.01 | 0.37 | 0.03 | 0.82 | -2.74 | -1.75 | -2.64 | -4.17 | -4.07 | -3.15 | -1.73 | -1.54 | -2.16 | -0.95 | -1.93 | -2.94 | -2.97 | -3.38 | -5.15 | -3.95 | -3.87 | -4.41 | -4.64 | -4.24 | -3.41 | -1.19 | -3.67 | -1.92 | -2.96 | -1.06 | -4.94 | -0.48 | -2.31 | -0.56 | -1.19 | -3.67 | -5.84 | -4.23 | -1.92 | -2.96 | -1.06 | -4.94 | -1.09 | 0.9 | 0.66 | 0.26 | 0.36 |
Cre17.g721400 (30782230) | -0.11 | -0.62 | -0.98 | -0.98 | -1.12 | -0.73 | -0.54 | -0.45 | -0.88 | -0.94 | -1.06 | -1.28 | -1.18 | -2.03 | -2.02 | -2.63 | -1.93 | -1.92 | -1.77 | -1.98 | -2.14 | -1.1 | -0.48 | -0.8 | 0.11 | 0.23 | 0.44 | 2.28 | -0.9 | -0.27 | -0.96 | -0.75 | 0.05 | -0.04 | 0.89 | 0.65 | 0.53 | 1.3 | 1.05 | 1.21 | 0.63 | 1.26 | 2.02 | 1.98 | 1.03 | 0.97 | 1.65 | 1.8 | 1.81 | 1.18 | 0.73 | 1.4 | 1.46 | 0.64 | 0.61 | 1.64 | 1.82 | 0.81 | 0.11 | 0.2 | 0.04 | -1.72 | -1.73 | -2.08 | -1.59 | -1.45 | -1.2 | -1.45 | -1.76 | -2.9 | 0.66 | 0.82 | 0.19 | -2.7 | -2.96 | -2.35 | -2.02 | -2.27 | -3.04 | -2.09 | -2.52 | -1.12 | -2.77 | -1.39 | -2.18 | -1.94 | -2.62 | -1.24 | -0.54 | -1.46 | -1.12 | -2.77 | -2.35 | -3.32 | -1.39 | -2.18 | -1.94 | -2.62 | -1.14 | -0.1 | 0.03 | -1.24 | -1.18 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.