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Gene | WT,12hL12hD,Log,1h Dark | WT,12hL12hD,Log,1h Light | WT,12hL12hD,Log,1h Light d2 | WT,12hL12hD,Log,3h Dark | WT,12hL12hD,Log,3h Light | WT,12hL12hD,Log,5h Dark | WT,12hL12hD,Log,5h Light | WT,12hL12hD,Log,7h Dark | WT,12hL12hD,Log,7h Light | WT,12hL12hD,Log,9h Dark | WT,12hL12hD,Log,9h Light | WT,12hL12hD,Log,11h Dark | WT,12hL12hD,Log,11h Light |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497732.1_6685 (KAA8497732) | 59.51 | 97.53 | 107.34 | 90.34 | 68.38 | 95.83 | 64.06 | 104.99 | 74.0 | 99.72 | 75.87 | 87.6 | 81.63 |
lcl|VRMN01000001.1_cds_KAA8497834.1_6787 (KAA8497834) | 23.85 | 39.45 | 38.72 | 39.3 | 53.49 | 37.87 | 30.34 | 37.89 | 23.4 | 42.56 | 28.41 | 37.01 | 40.58 |
lcl|VRMN01000001.1_cds_KAA8498025.1_6978 (KAA8498025) | 98.84 | 167.73 | 154.42 | 152.83 | 178.68 | 186.71 | 132.98 | 208.1 | 137.17 | 177.65 | 135.71 | 169.23 | 157.61 |
lcl|VRMN01000001.1_cds_KAA8498120.1_7073 (KAA8498120) | 26.35 | 40.35 | 44.86 | 32.07 | 32.96 | 44.82 | 17.18 | 54.41 | 27.16 | 45.79 | 23.22 | 49.91 | 32.48 |
lcl|VRMN01000001.1_cds_KAA8498215.1_7168 (KAA8498215) | 172.31 | 261.6 | 228.78 | 250.04 | 353.28 | 336.74 | 191.11 | 397.53 | 219.0 | 311.58 | 217.19 | 311.01 | 242.09 |
lcl|VRMN01000001.1_cds_KAA8498307.1_7260 (KAA8498307) | 88.72 | 123.12 | 121.36 | 135.98 | 143.7 | 190.66 | 118.11 | 208.85 | 125.06 | 179.07 | 141.72 | 186.83 | 178.61 |
lcl|VRMN01000001.1_cds_KAA8498446.1_7399 (KAA8498446) | 57.36 | 84.0 | 82.13 | 87.11 | 103.95 | 113.58 | 67.99 | 116.96 | 63.59 | 92.96 | 57.5 | 106.02 | 82.62 |
lcl|VRMN01000001.1_cds_KAA8498755.1_7708 (KAA8498755) | 23.44 | 30.4 | 34.97 | 28.73 | 31.71 | 35.68 | 23.69 | 34.61 | 26.85 | 31.04 | 25.44 | 26.54 | 30.6 |
lcl|VRMN01000001.1_cds_KAA8498798.1_7751 (KAA8498798) | 89.46 | 234.19 | 204.44 | 180.47 | 293.07 | 226.57 | 169.06 | 263.24 | 168.35 | 253.08 | 170.69 | 206.66 | 210.6 |
lcl|VRMN01000001.1_cds_KAA8498919.1_7872 (KAA8498919) | 24.55 | 28.6 | 30.62 | 33.83 | 26.39 | 35.01 | 20.13 | 35.01 | 22.52 | 31.38 | 21.98 | 28.18 | 24.75 |
lcl|VRMN01000001.1_cds_KAA8499033.1_7986 (KAA8499033) | 31.28 | 31.97 | 35.08 | 41.48 | 36.09 | 42.98 | 26.06 | 40.14 | 33.22 | 42.8 | 33.03 | 52.73 | 41.88 |
lcl|VRMN01000001.1_cds_KAA8499560.1_8513 (KAA8499560) | 92.59 | 126.76 | 107.68 | 120.2 | 152.02 | 141.46 | 105.73 | 161.79 | 114.19 | 138.93 | 97.01 | 144.34 | 133.78 |
lcl|VRMN01000001.1_cds_KAA8499613.1_8566 (KAA8499613) | 12.87 | 38.47 | 33.25 | 24.29 | 23.61 | 34.97 | 16.17 | 39.27 | 18.97 | 32.34 | 18.14 | 33.37 | 26.32 |
lcl|VRMN01000001.1_cds_KAA8499904.1_8857 (KAA8499904) | 11.16 | 35.62 | 32.59 | 25.85 | 23.67 | 38.43 | 24.05 | 44.42 | 23.29 | 38.73 | 19.06 | 38.75 | 25.97 |
lcl|VRMN01000001.1_cds_KAA8499930.1_8883 (KAA8499930) | 35.2 | 70.87 | 70.38 | 62.4 | 78.34 | 60.63 | 64.28 | 65.49 | 71.92 | 67.28 | 76.19 | 40.94 | 79.47 |
lcl|VRMN01000002.1_cds_KAA8496336.1_65 (KAA8496336) | 35.06 | 47.74 | 56.14 | 48.5 | 40.5 | 68.75 | 41.68 | 66.51 | 55.66 | 51.17 | 41.37 | 62.13 | 47.86 |
lcl|VRMN01000002.1_cds_KAA8496337.1_66 (KAA8496337) | 17.16 | 35.35 | 37.43 | 29.06 | 26.74 | 41.1 | 16.92 | 46.11 | 18.19 | 49.18 | 22.15 | 44.28 | 33.9 |
lcl|VRMN01000002.1_cds_KAA8496433.1_162 (KAA8496433) | 25.72 | 29.41 | 35.33 | 31.55 | 30.51 | 35.83 | 23.71 | 32.88 | 27.16 | 30.46 | 25.95 | 26.11 | 30.45 |
lcl|VRMN01000002.1_cds_KAA8496530.1_259 (KAA8496530) | 31.01 | 40.96 | 37.81 | 39.41 | 51.56 | 58.17 | 37.62 | 64.07 | 42.02 | 44.64 | 34.18 | 59.75 | 40.48 |
lcl|VRMN01000002.1_cds_KAA8496577.1_306 (KAA8496577) | 64.93 | 63.94 | 77.08 | 78.65 | 74.7 | 86.76 | 50.73 | 85.81 | 54.82 | 77.12 | 52.14 | 69.93 | 61.95 |
lcl|VRMN01000002.1_cds_KAA8496591.1_320 (KAA8496591) | 56.26 | 118.93 | 96.62 | 79.39 | 99.88 | 100.35 | 77.9 | 113.53 | 90.65 | 110.85 | 84.78 | 99.33 | 103.91 |
lcl|VRMN01000002.1_cds_KAA8496718.1_447 (KAA8496718) | 36.41 | 60.69 | 66.91 | 63.57 | 66.35 | 84.61 | 46.27 | 99.25 | 54.65 | 86.3 | 43.35 | 88.18 | 54.49 |
lcl|VRMN01000002.1_cds_KAA8497147.1_876 (KAA8497147) | 36.02 | 68.27 | 67.65 | 56.31 | 86.03 | 58.25 | 53.04 | 69.26 | 50.14 | 72.91 | 44.8 | 59.64 | 54.69 |
lcl|VRMN01000002.1_cds_KAA8497177.1_906 (KAA8497177) | 17.04 | 22.99 | 21.7 | 21.18 | 17.44 | 24.13 | 11.31 | 23.84 | 16.22 | 22.12 | 18.9 | 19.23 | 22.98 |
lcl|VRMN01000002.1_cds_KAA8497196.1_925 (KAA8497196) | 34.9 | 60.09 | 53.82 | 52.55 | 61.39 | 69.28 | 38.11 | 76.58 | 42.82 | 64.05 | 34.34 | 66.41 | 45.45 |
lcl|VRMN01000002.1_cds_KAA8497234.1_963 (KAA8497234) | 10.8 | 23.66 | 25.51 | 19.75 | 17.51 | 23.11 | 18.54 | 24.61 | 20.03 | 24.3 | 17.67 | 25.59 | 21.25 |
lcl|VRMN01000002.1_cds_KAA8497294.1_1023 (KAA8497294) | 30.31 | 39.45 | 27.93 | 35.68 | 32.1 | 46.89 | 20.66 | 53.29 | 30.03 | 44.36 | 28.41 | 53.59 | 33.57 |
lcl|VRMN01000003.1_cds_KAA8495229.1_1227 (KAA8495229) | 20.48 | 59.58 | 56.84 | 38.22 | 51.17 | 58.41 | 49.98 | 63.42 | 49.94 | 52.74 | 43.54 | 54.51 | 52.28 |
lcl|VRMN01000003.1_cds_KAA8495236.1_1234 (KAA8495236) | 36.85 | 36.07 | 35.6 | 36.94 | 37.82 | 41.86 | 22.52 | 41.14 | 35.49 | 35.68 | 34.9 | 33.86 | 47.32 |
lcl|VRMN01000003.1_cds_KAA8495461.1_1459 (KAA8495461) | 53.06 | 142.74 | 130.17 | 98.87 | 98.89 | 130.97 | 92.4 | 137.54 | 110.81 | 131.91 | 104.72 | 123.7 | 119.0 |
lcl|VRMN01000003.1_cds_KAA8495490.1_1488 (KAA8495490) | 26.76 | 38.49 | 32.98 | 40.35 | 47.68 | 48.65 | 34.03 | 42.55 | 29.2 | 47.62 | 28.81 | 35.45 | 31.31 |
lcl|VRMN01000003.1_cds_KAA8495533.1_1531 (KAA8495533) | 68.28 | 98.21 | 103.98 | 86.7 | 118.46 | 126.7 | 83.83 | 137.39 | 87.37 | 115.36 | 71.17 | 133.13 | 80.73 |
lcl|VRMN01000003.1_cds_KAA8495932.1_1930 (KAA8495932) | 76.36 | 121.96 | 89.68 | 105.22 | 115.83 | 134.55 | 97.86 | 142.71 | 109.3 | 127.45 | 90.63 | 157.1 | 93.79 |
lcl|VRMN01000003.1_cds_KAA8496009.1_2007 (KAA8496009) | 23.54 | 42.96 | 41.64 | 42.68 | 45.92 | 44.6 | 30.07 | 46.62 | 31.28 | 44.86 | 29.55 | 33.71 | 34.43 |
lcl|VRMN01000003.1_cds_KAA8496147.1_2145 (KAA8496147) | 38.58 | 67.41 | 59.59 | 67.34 | 78.6 | 75.9 | 56.38 | 80.97 | 53.45 | 77.77 | 51.73 | 69.26 | 62.24 |
lcl|VRMN01000003.1_cds_KAA8496151.1_2149 (KAA8496151) | 141.03 | 210.17 | 151.79 | 187.0 | 256.15 | 200.13 | 163.56 | 246.73 | 167.46 | 231.79 | 151.32 | 213.31 | 167.01 |
lcl|VRMN01000004.1_cds_KAA8495109.1_3639 (KAA8495109) | 27.28 | 38.42 | 32.06 | 33.64 | 37.1 | 30.5 | 29.0 | 32.22 | 26.51 | 34.81 | 26.99 | 26.32 | 32.23 |
lcl|VRMN01000005.1_cds_KAA8494065.1_3929 (KAA8494065) | 14.54 | 31.74 | 28.94 | 18.7 | 24.07 | 24.62 | 18.6 | 26.19 | 20.02 | 23.98 | 18.43 | 24.66 | 24.25 |
lcl|VRMN01000005.1_cds_KAA8494186.1_4050 (KAA8494186) | 20.06 | 34.39 | 32.01 | 40.37 | 37.88 | 49.24 | 24.44 | 54.09 | 26.39 | 53.5 | 22.72 | 49.34 | 32.51 |
lcl|VRMN01000006.1_cds_KAA8493540.1_4302 (KAA8493540) | 60.61 | 121.52 | 123.58 | 97.65 | 108.35 | 99.85 | 90.07 | 102.75 | 95.91 | 102.63 | 104.43 | 73.05 | 116.51 |
lcl|VRMN01000006.1_cds_KAA8493704.1_4466 (KAA8493704) | 72.51 | 102.3 | 95.36 | 74.33 | 76.13 | 96.57 | 49.13 | 85.62 | 69.5 | 68.5 | 66.62 | 71.41 | 95.31 |
lcl|VRMN01000006.1_cds_KAA8493718.1_4480 (KAA8493718) | 18.63 | 24.47 | 25.7 | 23.84 | 20.37 | 27.98 | 16.32 | 24.43 | 22.71 | 23.1 | 21.44 | 19.38 | 26.78 |
lcl|VRMN01000008.1_cds_KAA8492720.1_2456 (KAA8492720) | 24.48 | 31.08 | 25.41 | 31.49 | 27.03 | 41.62 | 14.27 | 48.58 | 24.34 | 30.62 | 23.65 | 38.64 | 27.08 |
lcl|VRMN01000008.1_cds_KAA8492752.1_2488 (KAA8492752) | 111.86 | 150.98 | 148.31 | 135.38 | 184.18 | 121.54 | 128.21 | 120.35 | 137.23 | 131.1 | 139.75 | 105.48 | 139.43 |
lcl|VRMN01000008.1_cds_KAA8493047.1_2783 (KAA8493047) | 24.17 | 28.41 | 27.2 | 39.88 | 46.86 | 40.54 | 35.49 | 41.2 | 34.17 | 44.49 | 30.5 | 33.55 | 32.5 |
lcl|VRMN01000009.1_cds_KAA8492452.1_9145 (KAA8492452) | 29.24 | 87.55 | 80.54 | 57.24 | 72.72 | 93.3 | 54.53 | 102.77 | 61.23 | 86.66 | 45.58 | 97.32 | 53.33 |
lcl|VRMN01000009.1_cds_KAA8492506.1_9199 (KAA8492506) | 45.0 | 143.74 | 119.31 | 96.36 | 107.62 | 133.45 | 95.68 | 146.16 | 97.64 | 147.53 | 83.81 | 143.97 | 102.87 |
lcl|VRMN01000010.1_cds_KAA8492180.1_5363 (KAA8492180) | 20.97 | 25.54 | 25.31 | 23.44 | 22.66 | 25.07 | 16.24 | 24.08 | 22.08 | 22.61 | 19.83 | 18.2 | 25.22 |
lcl|VRMN01000011.1_cds_KAA8491940.1_4948 (KAA8491940) | 21.68 | 23.48 | 20.52 | 21.16 | 26.49 | 29.31 | 14.87 | 26.6 | 20.23 | 29.41 | 18.62 | 41.66 | 23.06 |
lcl|VRMN01000016.1_cds_KAA8491117.1_9874 (KAA8491117) | 100.02 | 230.85 | 236.53 | 173.21 | 122.94 | 201.54 | 130.23 | 199.09 | 142.14 | 195.01 | 147.26 | 192.92 | 190.9 |
lcl|VRMN01000017.1_cds_KAA8490938.1_6141 (KAA8490938) | 61.59 | 81.51 | 88.31 | 87.47 | 87.12 | 76.4 | 63.47 | 82.42 | 65.12 | 94.39 | 66.85 | 70.04 | 74.64 |
lcl|VRMN01000020.1_cds_KAA8490676.1_4718 (KAA8490676) | 8.07 | 12.11 | 12.53 | 9.97 | 11.46 | 11.68 | 7.23 | 12.71 | 8.46 | 12.25 | 9.81 | 11.78 | 12.25 |
lcl|VRMN01000036.1_cds_KAA8490279.1_5949 (KAA8490279) | 27.94 | 56.93 | 48.2 | 44.99 | 59.57 | 60.31 | 43.07 | 68.49 | 46.51 | 65.75 | 40.12 | 63.75 | 45.14 |
lcl|VRMN01000036.1_cds_KAA8490281.1_5951 (KAA8490281) | 86.24 | 141.58 | 160.08 | 131.8 | 125.54 | 127.3 | 118.01 | 139.93 | 114.09 | 156.93 | 117.63 | 126.94 | 131.62 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)