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Gene | WT,12hL12hD,Log,1h Dark | WT,12hL12hD,Log,1h Light | WT,12hL12hD,Log,1h Light d2 | WT,12hL12hD,Log,3h Dark | WT,12hL12hD,Log,3h Light | WT,12hL12hD,Log,5h Dark | WT,12hL12hD,Log,5h Light | WT,12hL12hD,Log,7h Dark | WT,12hL12hD,Log,7h Light | WT,12hL12hD,Log,9h Dark | WT,12hL12hD,Log,9h Light | WT,12hL12hD,Log,11h Dark | WT,12hL12hD,Log,11h Light |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497563.1_6516 (KAA8497563) | 20.4 | 24.09 | 25.94 | 17.51 | 21.65 | 28.84 | 18.05 | 32.85 | 21.48 | 38.51 | 16.21 | 73.2 | 21.52 |
lcl|VRMN01000001.1_cds_KAA8497578.1_6531 (KAA8497578) | 0.0 | 0.03 | 0.03 | 0.0 | 0.0 | 0.0 | 0.02 | 0.0 | 0.02 | 0.05 | 0.04 | 0.09 | 0.05 |
lcl|VRMN01000001.1_cds_KAA8497933.1_6886 (KAA8497933) | 33.92 | 170.67 | 158.01 | 30.57 | 190.85 | 53.49 | 114.77 | 73.62 | 87.56 | 125.1 | 65.64 | 248.02 | 86.17 |
lcl|VRMN01000001.1_cds_KAA8498039.1_6992 (KAA8498039) | 178.01 | 93.76 | 132.77 | 600.52 | 34.45 | 670.1 | 30.79 | 1013.87 | 39.15 | 1045.13 | 40.51 | 1058.29 | 44.16 |
lcl|VRMN01000001.1_cds_KAA8498041.1_6994 (KAA8498041) | 28.16 | 26.83 | 24.98 | 74.42 | 8.51 | 92.82 | 11.74 | 126.34 | 10.19 | 114.8 | 10.54 | 120.86 | 10.73 |
lcl|VRMN01000001.1_cds_KAA8498043.1_6996 (KAA8498043) | 28.16 | 26.83 | 24.98 | 74.42 | 8.51 | 92.82 | 11.74 | 126.34 | 10.19 | 114.8 | 10.54 | 120.86 | 10.73 |
lcl|VRMN01000001.1_cds_KAA8498132.1_7085 (KAA8498132) | 0.04 | 0.09 | 0.04 | 0.0 | 0.04 | 0.24 | 0.04 | 0.0 | 0.09 | 0.0 | 0.0 | 0.1 | 0.15 |
lcl|VRMN01000001.1_cds_KAA8498271.1_7224 (KAA8498271) | 459.2 | 309.64 | 273.21 | 314.31 | 259.02 | 258.01 | 198.87 | 271.63 | 140.34 | 390.11 | 120.79 | 499.82 | 149.81 |
lcl|VRMN01000001.1_cds_KAA8498367.1_7320 (KAA8498367) | 158.43 | 1112.71 | 995.11 | 289.62 | 1068.92 | 387.94 | 939.76 | 659.87 | 812.68 | 1319.05 | 727.15 | 1897.48 | 548.02 |
lcl|VRMN01000001.1_cds_KAA8498439.1_7392 (KAA8498439) | 137.98 | 123.12 | 68.99 | 198.81 | 383.55 | 236.16 | 84.08 | 310.25 | 79.01 | 624.71 | 88.11 | 666.72 | 158.47 |
lcl|VRMN01000001.1_cds_KAA8498488.1_7441 (KAA8498488) | 175.43 | 295.18 | 272.04 | 193.33 | 171.9 | 289.59 | 158.64 | 445.85 | 185.96 | 615.08 | 179.17 | 1378.84 | 236.97 |
lcl|VRMN01000001.1_cds_KAA8499285.1_8238 (KAA8499285) | 1064.64 | 681.43 | 594.67 | 557.49 | 699.78 | 524.9 | 563.01 | 801.5 | 522.74 | 1803.45 | 555.82 | 4479.79 | 594.56 |
lcl|VRMN01000001.1_cds_KAA8499406.1_8359 (KAA8499406) | 0.0 | 0.0 | 0.0 | 0.01 | 0.0 | 0.0 | 0.02 | 0.02 | 0.0 | 0.0 | 0.0 | 0.03 | 0.0 |
lcl|VRMN01000001.1_cds_KAA8499513.1_8466 (KAA8499513) | 16.0 | 209.35 | 173.4 | 43.1 | 90.24 | 130.0 | 28.24 | 329.37 | 14.15 | 453.33 | 11.27 | 1070.6 | 34.17 |
lcl|VRMN01000001.1_cds_KAA8499536.1_8489 (KAA8499536) | 17.93 | 810.06 | 726.61 | 98.86 | 494.36 | 561.41 | 357.08 | 1228.01 | 123.98 | 1877.89 | 47.25 | 4174.81 | 58.46 |
lcl|VRMN01000001.1_cds_KAA8499540.1_8493 (KAA8499540) | 17.71 | 37.23 | 19.9 | 16.25 | 21.2 | 9.74 | 22.94 | 19.75 | 35.54 | 46.91 | 27.61 | 179.08 | 21.23 |
lcl|VRMN01000001.1_cds_KAA8499717.1_8670 (KAA8499717) | 125.53 | 132.86 | 107.82 | 112.12 | 120.41 | 125.5 | 123.46 | 158.19 | 113.45 | 188.37 | 85.33 | 660.47 | 86.62 |
lcl|VRMN01000001.1_cds_KAA8499864.1_8817 (KAA8499864) | 3.56 | 143.33 | 118.0 | 4.49 | 29.32 | 10.5 | 28.07 | 22.75 | 29.34 | 42.0 | 23.27 | 154.75 | 30.66 |
lcl|VRMN01000002.1_cds_KAA8496871.1_600 (KAA8496871) | 603.09 | 87.29 | 36.52 | 489.97 | 164.41 | 446.86 | 138.87 | 570.84 | 133.71 | 561.43 | 38.16 | 1737.27 | 58.35 |
lcl|VRMN01000002.1_cds_KAA8497198.1_927 (KAA8497198) | 67.06 | 92.48 | 84.92 | 57.97 | 29.28 | 66.21 | 43.19 | 63.19 | 29.8 | 66.13 | 25.19 | 141.7 | 30.15 |
lcl|VRMN01000002.1_cds_KAA8497362.1_1091 (KAA8497362) | 144.61 | 469.56 | 433.5 | 210.69 | 260.54 | 346.35 | 165.31 | 322.53 | 122.69 | 305.25 | 60.99 | 640.03 | 102.27 |
lcl|VRMN01000003.1_cds_KAA8495301.1_1299 (KAA8495301) | 34.28 | 92.17 | 70.89 | 67.25 | 25.92 | 86.48 | 19.59 | 109.47 | 24.13 | 128.48 | 27.49 | 251.26 | 40.38 |
lcl|VRMN01000003.1_cds_KAA8495334.1_1332 (KAA8495334) | 5.73 | 42.92 | 26.56 | 13.68 | 20.32 | 33.47 | 17.96 | 40.36 | 21.67 | 43.7 | 17.21 | 129.37 | 24.96 |
lcl|VRMN01000003.1_cds_KAA8495398.1_1396 (KAA8495398) | 319.19 | 373.1 | 283.66 | 229.05 | 305.12 | 357.16 | 202.45 | 400.86 | 299.74 | 389.74 | 237.54 | 744.34 | 305.29 |
lcl|VRMN01000003.1_cds_KAA8495489.1_1487 (KAA8495489) | 117.3 | 278.28 | 270.01 | 345.51 | 304.05 | 910.06 | 131.83 | 1720.64 | 52.7 | 1904.32 | 40.62 | 2499.9 | 51.92 |
lcl|VRMN01000003.1_cds_KAA8495497.1_1495 (KAA8495497) | 1.13 | 323.07 | 278.78 | 3.0 | 144.31 | 33.42 | 74.6 | 104.83 | 36.27 | 240.93 | 21.44 | 629.67 | 39.02 |
lcl|VRMN01000003.1_cds_KAA8495502.1_1500 (KAA8495502) | 87.19 | 132.12 | 108.63 | 78.19 | 563.48 | 93.0 | 275.49 | 140.91 | 238.64 | 283.08 | 216.74 | 598.24 | 212.65 |
lcl|VRMN01000003.1_cds_KAA8495729.1_1727 (KAA8495729) | 562.88 | 240.4 | 235.9 | 653.42 | 128.43 | 587.33 | 216.1 | 686.71 | 242.6 | 837.91 | 304.68 | 1269.66 | 253.95 |
lcl|VRMN01000003.1_cds_KAA8495767.1_1765 (KAA8495767) | 3.02 | 28.38 | 23.57 | 3.87 | 5.61 | 7.93 | 2.81 | 4.51 | 5.44 | 7.38 | 3.06 | 64.72 | 6.14 |
lcl|VRMN01000003.1_cds_KAA8495793.1_1791 (KAA8495793) | 126.2 | 604.58 | 337.01 | 144.7 | 309.83 | 176.34 | 303.9 | 209.98 | 194.71 | 247.03 | 41.77 | 795.63 | 61.76 |
lcl|VRMN01000003.1_cds_KAA8495797.1_1795 (KAA8495797) | 775.25 | 2142.04 | 1446.75 | 1047.71 | 417.55 | 1366.88 | 879.28 | 1399.51 | 836.88 | 1281.45 | 465.16 | 1848.96 | 565.2 |
lcl|VRMN01000003.1_cds_KAA8496003.1_2001 (KAA8496003) | 47.43 | 178.16 | 171.65 | 58.62 | 100.4 | 90.08 | 86.12 | 136.67 | 77.63 | 150.86 | 53.48 | 282.69 | 65.69 |
lcl|VRMN01000004.1_cds_KAA8494522.1_3052 (KAA8494522) | 66.37 | 33.7 | 29.54 | 107.25 | 36.06 | 147.07 | 40.37 | 211.73 | 41.32 | 228.83 | 35.35 | 353.98 | 40.97 |
lcl|VRMN01000004.1_cds_KAA8494556.1_3086 (KAA8494556) | 1.95 | 20.24 | 10.04 | 1.28 | 11.65 | 2.63 | 2.43 | 9.07 | 4.41 | 35.49 | 3.94 | 348.9 | 4.31 |
lcl|VRMN01000004.1_cds_KAA8494711.1_3241 (KAA8494711) | 63.32 | 74.67 | 60.19 | 51.31 | 51.63 | 65.48 | 68.8 | 73.73 | 81.48 | 84.18 | 65.06 | 169.18 | 70.8 |
lcl|VRMN01000004.1_cds_KAA8494901.1_3431 (KAA8494901) | 19.78 | 43.16 | 34.11 | 18.86 | 29.24 | 19.47 | 28.94 | 25.17 | 37.17 | 44.24 | 30.28 | 128.61 | 32.5 |
lcl|VRMN01000004.1_cds_KAA8494902.1_3432 (KAA8494902) | 6.37 | 35.38 | 21.24 | 4.66 | 17.49 | 8.43 | 18.58 | 36.78 | 20.55 | 99.16 | 16.63 | 362.86 | 16.94 |
lcl|VRMN01000004.1_cds_KAA8494903.1_3433 (KAA8494903) | 185.7 | 269.73 | 179.51 | 102.22 | 125.3 | 72.92 | 150.57 | 116.83 | 170.81 | 293.12 | 172.66 | 748.53 | 166.08 |
lcl|VRMN01000004.1_cds_KAA8495176.1_3706 (KAA8495176) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.11 | 0.0 |
lcl|VRMN01000006.1_cds_KAA8493487.1_4249 (KAA8493487) | 0.0 | 0.0 | 0.0 | 0.02 | 0.08 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | 0.0 |
lcl|VRMN01000006.1_cds_KAA8493696.1_4458 (KAA8493696) | 49.86 | 287.07 | 236.11 | 48.19 | 204.77 | 90.01 | 164.85 | 155.84 | 104.75 | 323.92 | 55.13 | 609.81 | 58.45 |
lcl|VRMN01000006.1_cds_KAA8493845.1_4607 (KAA8493845) | 60.74 | 43.64 | 41.73 | 62.42 | 32.64 | 51.27 | 38.57 | 76.42 | 37.43 | 197.82 | 39.66 | 487.45 | 43.06 |
lcl|VRMN01000007.1_cds_KAA8493276.1_9577 (KAA8493276) | 0.02 | 0.0 | 0.0 | 0.03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
lcl|VRMN01000007.1_cds_KAA8493350.1_9651 (KAA8493350) | 66.66 | 141.83 | 96.17 | 100.28 | 104.73 | 168.96 | 109.9 | 255.79 | 128.24 | 274.93 | 129.03 | 524.09 | 160.91 |
lcl|VRMN01000008.1_cds_KAA8492940.1_2676 (KAA8492940) | 216.83 | 1039.06 | 718.22 | 239.86 | 1158.7 | 266.43 | 766.33 | 565.27 | 551.5 | 1198.95 | 477.72 | 2568.56 | 577.24 |
lcl|VRMN01000008.1_cds_KAA8493024.1_2760 (KAA8493024) | 59.67 | 528.9 | 364.15 | 91.67 | 83.75 | 110.0 | 81.95 | 200.01 | 70.83 | 525.89 | 63.75 | 1127.59 | 82.67 |
lcl|VRMN01000009.1_cds_KAA8492594.1_9287 (KAA8492594) | 21.96 | 55.56 | 30.43 | 33.07 | 29.09 | 47.89 | 22.02 | 92.64 | 21.66 | 225.4 | 26.5 | 789.37 | 29.88 |
lcl|VRMN01000010.1_cds_KAA8492189.1_5372 (KAA8492189) | 32.04 | 64.94 | 68.14 | 27.14 | 50.38 | 31.07 | 53.79 | 42.31 | 52.64 | 84.01 | 44.16 | 120.21 | 43.18 |
lcl|VRMN01000010.1_cds_KAA8492291.1_5474 (KAA8492291) | 12.2 | 12.33 | 12.13 | 16.14 | 10.18 | 17.09 | 8.76 | 22.47 | 10.78 | 32.73 | 12.39 | 52.8 | 15.24 |
lcl|VRMN01000010.1_cds_KAA8492306.1_5489 (KAA8492306) | 11.71 | 16.13 | 16.87 | 16.77 | 11.92 | 21.5 | 10.99 | 27.88 | 13.7 | 37.89 | 12.44 | 72.32 | 16.3 |
lcl|VRMN01000011.1_cds_KAA8491820.1_4828 (KAA8491820) | 3.79 | 63.2 | 52.0 | 3.57 | 34.43 | 2.68 | 49.48 | 12.19 | 28.96 | 188.26 | 13.05 | 1668.98 | 11.19 |
lcl|VRMN01000011.1_cds_KAA8491876.1_4884 (KAA8491876) | 135.76 | 362.48 | 271.84 | 138.51 | 191.24 | 178.59 | 176.25 | 274.3 | 213.62 | 419.42 | 174.16 | 931.24 | 182.07 |
lcl|VRMN01000011.1_cds_KAA8491939.1_4947 (KAA8491939) | 41.27 | 38.38 | 26.82 | 56.43 | 42.09 | 70.66 | 31.53 | 115.79 | 36.5 | 160.75 | 32.01 | 455.07 | 32.88 |
lcl|VRMN01000011.1_cds_KAA8491958.1_4966 (KAA8491958) | 1072.45 | 622.36 | 524.94 | 569.32 | 1643.01 | 1491.4 | 268.93 | 2824.08 | 264.64 | 4837.89 | 149.13 | 6597.38 | 242.53 |
lcl|VRMN01000011.1_cds_KAA8492003.1_5011 (KAA8492003) | 26.04 | 51.45 | 48.35 | 33.83 | 31.65 | 47.92 | 30.4 | 52.55 | 40.51 | 69.81 | 44.25 | 138.1 | 51.06 |
lcl|VRMN01000012.1_cds_KAA8491624.1_5092 (KAA8491624) | 243.82 | 23.69 | 23.25 | 148.36 | 34.11 | 99.52 | 24.99 | 141.88 | 23.7 | 181.02 | 14.52 | 332.77 | 17.14 |
lcl|VRMN01000012.1_cds_KAA8491626.1_5094 (KAA8491626) | 50.47 | 127.39 | 143.9 | 107.67 | 24.13 | 96.37 | 34.94 | 246.92 | 30.8 | 1057.92 | 24.84 | 882.5 | 29.27 |
lcl|VRMN01000012.1_cds_KAA8491630.1_5098 (KAA8491630) | 41.12 | 23.33 | 16.9 | 24.32 | 62.4 | 30.16 | 50.6 | 44.16 | 37.44 | 71.09 | 19.27 | 183.67 | 17.47 |
lcl|VRMN01000012.1_cds_KAA8491631.1_5099 (KAA8491631) | 987.63 | 5542.52 | 4120.16 | 922.06 | 7152.23 | 1289.34 | 7172.6 | 1932.52 | 4145.77 | 3375.09 | 976.09 | 7536.52 | 456.81 |
lcl|VRMN01000012.1_cds_KAA8491632.1_5100 (KAA8491632) | 26.22 | 36.83 | 57.26 | 25.48 | 65.61 | 29.77 | 73.62 | 44.7 | 48.28 | 74.81 | 15.56 | 131.74 | 9.77 |
lcl|VRMN01000014.1_cds_KAA8491282.1_2283 (KAA8491282) | 0.12 | 0.06 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.19 | 0.06 | 0.28 | 0.0 |
lcl|VRMN01000015.1_cds_KAA8491152.1_5780 (KAA8491152) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.05 | 0.0 |
lcl|VRMN01000015.1_cds_KAA8491240.1_5868 (KAA8491240) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | 0.0 |
lcl|VRMN01000016.1_cds_KAA8491041.1_9798 (KAA8491041) | 109.37 | 238.28 | 219.44 | 88.45 | 155.86 | 133.41 | 169.21 | 200.35 | 130.16 | 270.61 | 78.07 | 411.41 | 80.65 |
lcl|VRMN01000016.1_cds_KAA8491069.1_9826 (KAA8491069) | 116.71 | 112.6 | 81.04 | 93.19 | 50.48 | 109.79 | 44.63 | 115.64 | 61.65 | 124.78 | 52.69 | 321.71 | 66.41 |
lcl|VRMN01000016.1_cds_KAA8491093.1_9850 (KAA8491093) | 66.24 | 145.68 | 104.14 | 73.89 | 53.24 | 191.93 | 29.81 | 447.43 | 19.52 | 841.64 | 23.33 | 1173.7 | 42.38 |
lcl|VRMN01000017.1_cds_KAA8490943.1_6146 (KAA8490943) | 56.46 | 99.69 | 93.61 | 131.59 | 48.27 | 185.27 | 63.63 | 252.92 | 65.12 | 312.21 | 70.26 | 564.95 | 75.11 |
lcl|VRMN01000018.1_cds_KAA8490885.1_5657 (KAA8490885) | 12.58 | 171.34 | 109.95 | 41.01 | 104.19 | 75.11 | 114.4 | 99.96 | 79.09 | 122.66 | 47.43 | 140.65 | 51.79 |
lcl|VRMN01000018.1_cds_KAA8490894.1_5666 (KAA8490894) | 28.33 | 147.18 | 158.28 | 76.91 | 167.7 | 204.51 | 95.65 | 339.94 | 87.96 | 380.77 | 126.69 | 665.96 | 179.12 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)