Heatmap: Cluster_119 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
14.98 19.92 9.87 18.57 15.41 17.7 28.28 7.79 20.82 19.96 12.96 16.87 12.73 34.09 9.6 8.77 5.93 38.28 55.5 13.78 29.51 25.6 26.75 19.41 3.16 1.56 1.88 9.75 8.65 16.5 8.05 28.65 16.47 50.09 20.46
22.8 26.92 15.41 25.71 12.06 22.27 30.84 37.29 21.69 24.82 25.86 19.95 8.86 11.7 7.05 11.93 1.34 31.35 33.39 4.36 17.41 30.99 13.8 8.69 3.32 4.66 5.04 20.36 10.97 18.27 12.64 27.41 17.69 31.51 11.12
44.92 59.93 37.25 46.68 14.02 58.62 60.26 30.25 47.84 65.27 8.55 6.7 12.27 8.89 25.53 17.6 31.37 45.57 43.75 16.95 21.52 22.64 19.13 17.64 2.88 11.63 4.11 1.07 9.02 34.46 26.78 44.46 9.29 39.01 1.29
37.42 51.61 36.98 53.4 39.59 45.9 58.53 48.56 50.83 52.19 39.82 42.68 22.64 56.83 52.01 49.98 35.37 75.56 96.65 22.81 34.01 66.75 30.73 55.97 14.85 31.63 32.38 33.49 19.36 75.92 70.56 48.01 39.67 63.61 45.3
25.28 18.79 20.09 17.92 12.11 25.88 15.33 15.62 21.08 24.04 10.98 12.19 10.09 12.31 13.93 7.88 3.18 24.9 20.59 6.6 19.09 31.46 15.06 18.25 5.05 7.94 7.41 4.22 9.51 18.33 19.37 28.36 11.32 33.22 10.29
28.76 28.74 24.63 27.07 11.65 21.82 21.62 13.15 24.17 24.49 20.57 24.02 4.92 2.65 25.19 22.09 9.77 38.18 44.22 4.78 20.7 28.64 14.18 11.44 2.63 9.22 8.05 26.7 6.63 12.33 13.76 16.62 23.11 36.82 4.59
111.55 105.18 103.07 138.13 165.0 127.0 171.09 69.79 155.4 148.59 139.53 185.07 151.42 247.9 183.77 117.67 153.57 286.12 362.54 100.19 150.58 163.15 178.58 106.59 31.85 34.62 32.84 52.44 107.11 145.73 49.98 252.09 171.44 378.33 235.02
19.7 17.53 21.36 23.96 4.99 13.63 15.44 7.73 17.21 17.58 7.47 11.68 10.62 2.77 20.36 22.68 4.83 25.59 28.91 5.2 8.93 11.6 4.83 9.79 1.3 1.17 1.27 14.59 9.62 8.76 5.54 12.16 13.7 23.12 6.53
70.66 60.05 50.71 53.56 42.3 68.32 60.58 40.69 58.57 59.06 35.41 45.6 27.99 48.04 28.98 21.45 20.08 80.11 108.58 15.4 103.51 107.2 69.12 51.36 13.7 15.1 13.49 48.46 24.6 47.11 33.51 68.49 39.81 84.42 33.67
41.56 42.77 32.76 33.47 46.85 46.45 37.61 34.6 48.73 45.44 19.16 28.76 54.82 22.24 46.86 29.36 44.52 66.55 85.48 20.23 73.79 64.87 52.53 32.98 13.08 21.75 20.12 38.64 17.42 40.52 27.67 48.24 21.91 78.8 15.09
34.95 36.83 32.65 41.77 19.38 40.48 49.78 18.89 44.49 43.26 13.12 21.55 6.77 6.25 25.18 15.0 3.68 36.02 37.0 12.87 26.3 25.85 18.14 23.67 6.87 10.11 8.4 30.35 8.86 18.97 9.23 34.3 21.17 50.0 10.88
75.82 84.42 63.02 77.08 71.81 81.92 94.55 46.67 76.63 78.73 51.53 69.59 55.99 63.84 137.28 90.62 110.88 151.96 168.49 45.27 14.73 28.52 16.62 77.09 29.24 48.58 48.83 68.09 59.32 101.3 82.77 134.92 63.42 105.06 74.33
32.34 34.73 21.26 25.38 16.47 40.39 38.04 17.71 39.34 37.32 13.31 18.18 10.74 8.68 29.67 11.92 11.19 37.51 32.65 7.04 10.82 15.25 11.84 12.82 3.39 16.21 14.43 13.91 8.82 17.27 11.93 27.34 17.64 45.29 25.44
29.77 37.86 21.8 32.71 15.63 31.33 38.34 16.4 33.78 37.44 11.96 13.29 6.93 4.44 11.11 13.93 6.28 40.02 39.8 8.66 10.45 14.39 7.03 5.48 1.31 14.13 8.68 24.88 9.24 5.43 5.93 6.08 13.14 24.29 17.72
25.64 20.07 17.87 19.59 16.59 27.06 22.74 22.46 27.24 27.78 19.31 20.17 4.94 11.65 14.43 10.76 5.21 26.09 26.62 4.77 24.12 30.0 15.93 12.66 3.91 8.42 6.84 36.08 9.89 18.52 16.73 16.75 21.56 27.52 16.59
58.09 130.39 69.2 121.32 16.5 51.02 90.97 59.73 29.4 50.59 41.33 26.51 24.97 32.74 40.35 86.28 34.25 72.35 93.32 35.14 4.2 13.98 5.35 15.18 9.35 39.57 8.89 32.28 14.15 16.27 23.16 27.1 32.96 27.92 11.87
20.3 20.4 16.54 18.13 8.96 27.64 20.54 20.75 21.13 25.15 13.9 13.1 5.53 6.9 9.53 7.98 0.7 26.5 22.5 5.66 15.39 26.62 8.95 14.16 1.78 7.68 11.88 6.27 5.13 26.99 22.54 27.71 12.83 41.48 5.44
86.99 72.23 67.61 64.5 46.07 74.55 72.32 91.98 63.46 68.82 46.22 52.63 64.73 60.25 221.54 111.08 258.29 174.33 205.26 52.29 23.86 45.52 18.01 180.95 32.21 83.64 69.78 13.0 44.24 177.37 170.77 130.91 54.91 155.61 106.36
27.11 19.98 18.95 13.08 15.55 32.6 11.86 21.44 18.28 22.31 10.21 13.93 4.87 13.28 16.62 4.59 4.91 32.12 31.21 7.23 9.08 15.65 8.0 12.36 3.87 7.35 7.66 4.95 7.77 16.56 16.69 18.47 13.73 37.59 10.82
10.7 24.26 11.68 21.69 5.27 12.59 25.52 10.87 9.67 13.35 5.17 6.79 3.67 13.77 2.05 2.45 0.93 19.99 20.14 1.22 3.3 8.1 2.95 3.84 0.66 1.06 0.93 5.1 3.08 6.56 3.02 7.51 7.08 40.49 9.64
31.51 38.76 22.1 35.01 12.45 33.3 43.66 20.85 28.24 35.66 8.44 12.85 17.37 12.04 12.83 11.66 4.81 33.23 30.62 7.45 15.92 26.21 11.85 10.88 1.41 3.19 3.03 9.69 7.69 13.99 11.69 17.36 10.7 43.25 6.08
21.74 26.86 19.2 22.63 9.12 27.62 23.78 20.72 17.71 26.71 15.46 18.99 11.83 7.78 7.45 4.8 4.16 34.45 19.74 8.94 19.4 42.19 17.36 14.0 1.57 6.24 4.35 1.17 3.16 47.33 19.66 64.48 14.53 59.35 8.84
24.95 32.53 25.08 32.73 21.79 26.67 29.94 30.22 25.87 31.56 31.25 29.07 16.35 15.86 21.31 18.58 12.76 41.08 41.85 14.61 4.63 15.07 5.35 19.14 8.31 7.69 6.67 28.69 23.7 34.33 21.38 39.91 30.07 39.64 22.77
13.78 12.46 14.91 16.3 9.06 16.42 20.05 8.39 20.48 16.85 2.06 2.48 5.1 1.48 8.4 4.33 5.74 14.42 12.91 3.33 3.91 7.72 3.13 11.23 4.16 16.03 8.14 3.37 1.74 10.26 10.92 7.82 1.65 8.39 0.18
21.86 26.48 19.24 24.53 20.1 27.93 32.67 15.74 29.64 28.66 11.82 16.06 16.71 17.84 26.53 18.92 31.83 34.88 38.08 13.99 2.38 4.83 2.93 16.57 4.63 8.6 9.42 12.28 11.17 34.63 24.76 39.59 17.03 35.32 10.64
102.21 96.55 80.47 88.39 35.57 74.44 86.37 41.45 74.54 86.51 46.8 68.78 30.44 47.24 100.34 73.0 60.09 127.39 156.64 35.01 57.48 78.88 31.91 82.66 19.43 34.52 30.67 49.48 29.77 53.75 51.94 56.51 75.02 95.51 10.8
16.22 17.97 13.13 21.14 14.65 17.25 25.92 11.58 19.11 19.34 4.19 5.33 6.9 6.5 6.8 5.89 7.27 19.33 17.53 4.93 14.76 16.73 9.72 8.67 3.21 18.42 10.68 9.69 6.61 12.98 13.36 16.35 5.82 15.32 1.59
13.44 14.67 10.69 12.45 8.61 15.52 13.64 7.9 12.52 16.13 12.81 15.09 3.64 3.48 9.43 11.3 5.14 19.06 20.51 4.44 3.36 10.6 5.07 4.43 0.76 5.43 3.29 11.22 6.73 5.5 5.14 7.52 13.87 26.17 4.8
66.11 62.77 61.76 44.86 58.25 69.67 45.3 48.61 66.13 61.46 47.95 45.27 37.98 28.51 114.9 70.16 105.06 107.5 144.46 53.87 53.84 71.95 38.09 87.64 27.07 34.98 27.37 63.91 29.55 76.05 75.62 50.94 36.18 95.25 27.69
25.53 29.15 22.41 30.95 18.98 28.11 31.9 18.76 26.61 32.59 11.79 17.55 15.58 19.63 19.49 14.4 10.17 34.36 41.65 8.3 30.94 36.4 24.28 14.24 2.72 7.39 6.13 13.61 10.16 20.62 19.01 23.36 16.38 59.39 17.43
32.44 31.86 28.61 27.61 35.35 39.64 24.95 21.46 31.02 31.85 14.34 17.03 13.67 14.79 29.32 16.56 7.44 48.11 39.17 11.78 19.01 31.41 17.38 22.59 5.58 13.14 9.54 24.49 10.77 31.67 26.0 42.43 18.62 42.43 12.98
33.17 30.79 29.34 30.35 27.82 34.91 36.18 21.55 39.85 36.85 22.5 33.84 47.05 16.8 41.24 24.91 37.43 44.67 56.53 15.39 33.26 57.5 21.61 26.19 7.18 13.7 12.34 18.06 11.92 21.66 15.58 26.69 25.82 80.49 23.38
8.84 10.98 7.66 8.99 4.03 11.1 9.32 6.43 8.41 10.25 9.25 8.61 0.73 2.22 4.78 4.35 1.76 10.19 13.16 0.93 3.49 7.25 3.09 0.95 0.04 0.95 0.95 5.88 1.26 4.91 2.64 5.88 7.42 11.82 4.37
11.98 11.94 10.0 8.83 12.26 16.58 10.24 7.46 15.05 14.37 10.54 8.94 3.96 6.84 16.38 8.63 7.11 22.86 23.55 4.15 11.88 12.26 9.43 10.64 9.52 2.66 1.49 7.38 6.09 6.77 7.25 8.54 10.93 27.36 11.65
31.25 34.17 23.33 32.98 18.29 35.71 38.34 19.64 38.83 36.99 21.11 29.54 21.18 15.64 17.42 16.96 7.42 45.61 55.06 17.41 18.65 23.98 16.18 29.18 8.05 5.07 7.18 32.67 18.11 15.05 11.0 20.26 28.02 71.06 49.92
25.31 40.29 26.95 47.86 26.42 33.63 66.35 16.27 43.92 43.72 19.64 30.69 19.75 16.75 19.22 21.52 7.65 64.69 60.99 10.37 20.18 26.23 20.32 18.98 3.96 9.03 7.35 28.53 16.94 29.34 11.83 54.48 26.76 92.52 7.14
54.19 80.24 41.92 60.62 30.05 47.29 61.19 31.9 37.83 54.08 42.72 53.1 51.76 27.54 28.64 38.61 21.51 77.68 68.59 22.05 40.74 50.26 20.6 10.88 3.31 15.81 13.11 25.27 21.11 36.56 26.74 42.63 49.06 92.63 33.46
7.38 18.27 7.45 12.93 3.9 9.64 12.48 7.24 5.85 11.14 7.55 7.61 1.19 1.94 4.69 6.56 5.96 9.52 16.02 1.68 0.38 4.2 0.42 2.58 0.4 3.77 2.76 5.5 3.53 3.33 1.96 5.06 7.55 7.13 3.36
28.59 46.76 21.57 33.8 18.32 31.83 37.29 18.05 25.56 28.44 20.62 24.74 10.79 4.04 26.64 27.92 17.53 34.11 45.47 14.13 9.18 24.1 7.6 26.68 3.16 19.67 18.54 6.25 7.56 23.29 27.93 15.86 15.05 33.51 1.37
45.2 39.56 35.25 33.91 34.25 47.91 27.13 32.09 44.41 43.99 26.88 37.86 11.05 6.33 31.17 29.32 10.66 46.61 43.89 11.35 31.02 32.47 20.8 25.71 9.31 8.96 8.82 51.46 12.55 15.98 18.95 13.52 38.78 54.25 13.98
28.03 27.66 19.82 24.86 16.4 26.09 27.27 14.16 22.15 27.6 13.44 15.48 7.52 8.8 20.39 16.57 7.09 32.41 26.89 11.23 11.06 23.44 10.52 12.94 5.59 9.3 9.68 25.78 10.77 18.13 15.0 23.89 17.44 27.74 9.59
49.35 60.13 48.55 47.41 25.99 47.91 29.61 36.85 36.6 43.93 29.18 25.61 7.31 8.8 43.03 39.78 20.26 52.5 92.53 9.33 50.25 62.31 18.13 50.45 11.53 36.57 54.23 23.84 9.15 59.3 63.95 38.59 26.78 74.53 9.59
81.42 76.69 62.36 64.73 61.47 77.43 64.55 56.54 65.55 64.12 22.43 33.72 43.1 33.59 56.92 36.39 26.28 93.8 86.44 38.67 45.5 55.81 37.73 77.26 22.43 29.81 26.58 35.46 40.5 79.71 66.98 92.0 31.84 104.61 38.28
15.31 21.57 11.33 20.97 9.81 18.47 23.92 11.46 18.91 19.31 8.76 11.01 4.99 5.06 9.56 7.17 1.79 19.99 31.58 3.53 7.8 11.27 4.41 8.42 2.98 9.37 10.46 0.94 4.82 9.57 10.13 10.1 9.11 20.58 3.82
19.37 17.57 14.53 13.58 9.51 22.17 14.82 15.2 16.77 19.27 8.69 12.16 4.64 4.01 9.29 4.45 6.99 26.98 22.01 3.88 14.15 17.8 7.71 12.84 3.46 5.49 4.17 3.17 5.95 27.9 10.58 44.94 10.28 33.9 3.66
29.65 37.98 26.64 36.3 15.25 29.02 31.49 30.02 27.31 30.44 33.84 29.1 7.32 14.81 31.69 30.04 15.64 34.19 35.89 8.17 7.7 15.11 6.25 6.99 1.94 25.22 17.37 37.12 8.78 9.91 11.93 11.26 29.8 38.37 11.5
17.2 21.54 12.95 16.46 8.13 19.83 19.25 13.79 15.12 18.34 4.52 6.99 3.2 5.73 11.07 8.69 5.0 23.98 30.6 4.7 4.88 11.58 3.18 10.35 3.29 5.61 5.66 8.37 5.99 19.07 13.48 23.18 7.1 20.32 0.77
20.6 19.58 8.66 14.0 13.31 19.61 18.03 10.26 16.73 18.63 6.88 9.4 6.42 10.82 19.38 12.73 2.38 31.33 37.22 4.47 13.08 20.92 9.88 14.88 3.24 6.53 8.41 13.44 8.42 14.51 12.01 16.85 9.26 35.98 3.07
47.6 54.22 36.6 45.37 16.39 41.51 39.94 21.66 45.84 51.38 60.8 56.3 20.29 15.49 35.04 44.5 1.13 74.06 77.35 17.38 20.75 29.52 13.03 18.43 4.27 19.06 12.34 50.38 11.9 14.8 14.65 18.18 55.39 51.76 17.98
6.7 7.17 5.66 7.35 4.53 7.93 9.96 6.42 8.58 9.0 7.96 9.56 4.78 5.57 8.31 7.47 1.67 16.77 17.9 4.06 8.1 20.9 6.44 7.6 1.62 1.05 0.63 4.87 3.27 7.35 4.41 11.21 8.47 16.87 4.5
45.69 65.15 56.71 74.17 20.91 40.41 58.04 56.81 52.08 66.78 34.97 40.99 22.63 29.74 29.28 67.64 11.01 72.9 98.22 27.2 51.27 33.57 35.76 29.44 12.59 23.59 7.4 23.5 53.95 24.97 27.6 25.17 53.76 67.64 24.85
21.42 28.4 19.74 28.27 6.63 23.76 31.41 14.74 21.32 25.72 7.81 11.44 4.32 7.51 10.83 8.25 7.58 27.65 34.75 2.6 11.35 23.81 6.04 7.67 0.93 3.99 2.95 7.21 4.99 16.27 8.59 25.72 10.95 34.49 1.03
43.13 40.04 34.96 32.66 25.19 44.92 37.24 25.22 44.25 45.48 19.54 26.1 18.31 3.06 41.52 29.66 30.57 71.02 71.11 21.68 8.85 16.08 7.03 24.18 5.67 12.6 7.7 27.6 19.3 27.56 18.18 38.1 22.72 80.07 16.23
17.25 15.7 14.04 14.15 16.33 21.89 12.72 16.79 20.11 19.52 60.89 26.23 6.77 3.32 58.52 40.04 44.85 50.27 48.36 19.69 3.28 11.95 4.26 15.45 6.72 20.48 17.09 20.5 10.98 26.15 30.38 20.57 31.75 52.42 42.78
10.44 14.05 9.71 14.65 8.76 12.65 11.92 6.63 13.73 15.29 24.11 10.38 2.52 2.63 17.94 14.59 11.42 25.99 28.69 6.45 1.45 6.45 2.72 4.29 1.85 1.49 1.21 11.39 6.14 3.11 2.15 2.57 12.44 27.9 16.89

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)