Heatmap: Cluster_92 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
42.37 67.72 35.09 70.78 24.14 39.27 87.81 59.36 51.66 61.61 39.66 57.06 94.26 46.42 10.8 33.15 13.41 45.52 70.53 30.91 11.56 38.58 12.86 47.84 17.33 16.63 9.16 71.84 53.43 35.01 39.49 43.85 60.94 75.42 51.21
20.92 49.93 17.39 42.85 11.64 26.59 39.12 20.63 34.76 35.54 5.01 5.73 8.47 7.67 2.93 8.9 0.0 32.14 30.41 9.16 3.5 4.5 0.52 18.59 20.48 12.54 5.71 26.34 28.23 7.25 9.77 5.74 7.33 4.7 20.87
13.17 18.53 12.84 22.25 10.46 15.44 26.7 16.67 18.11 21.06 16.02 22.43 21.65 16.8 10.25 13.63 4.17 21.23 31.1 19.33 2.74 7.41 2.41 18.26 8.11 7.74 10.34 21.73 14.51 23.59 15.87 24.72 23.85 22.95 39.34
17.86 28.68 10.8 18.34 8.96 15.13 20.85 8.63 12.85 15.82 8.51 11.82 22.72 9.99 4.66 7.89 5.68 11.06 16.22 3.86 13.13 17.83 6.55 8.29 1.57 2.5 0.78 14.49 9.98 7.02 5.0 10.86 11.63 26.89 14.29
30.61 22.14 22.4 15.97 18.46 36.77 15.45 27.37 24.68 29.71 39.3 36.92 9.57 17.86 23.91 36.0 16.8 34.13 57.36 10.64 10.72 16.3 7.29 24.0 8.12 12.07 15.51 35.61 33.23 42.08 20.7 61.98 31.54 63.94 53.51
18.24 21.97 13.03 21.57 13.54 22.31 32.16 18.29 24.01 26.99 22.08 30.56 26.27 21.74 11.0 11.53 6.55 28.31 34.69 14.53 9.53 11.61 9.15 13.09 7.01 15.96 15.6 22.21 22.51 25.84 22.46 34.39 33.12 21.78 33.62
58.86 76.45 58.04 90.62 54.39 70.3 101.24 57.38 84.42 88.3 58.94 59.89 41.2 72.86 40.65 42.68 23.09 104.45 96.11 94.15 32.56 42.86 35.23 62.88 45.79 34.97 33.12 137.53 81.85 93.41 68.28 127.36 68.8 81.68 121.78
9.12 17.44 10.13 20.08 9.49 11.66 20.26 11.61 16.9 16.2 4.01 5.34 3.56 4.01 4.38 8.49 1.87 19.81 25.32 6.66 1.35 4.92 3.13 7.84 4.41 9.89 5.04 12.24 6.53 15.22 12.54 18.08 5.41 12.5 4.22
13.29 25.11 19.14 32.89 7.95 15.32 34.73 20.71 19.69 25.47 17.28 22.69 12.2 32.29 9.08 17.49 3.47 28.31 42.93 10.48 12.46 21.71 7.72 11.56 1.97 9.27 9.86 18.24 23.68 18.67 13.64 24.83 23.38 48.75 45.2
42.82 68.64 42.61 82.57 27.36 38.83 75.09 63.41 37.64 47.7 34.7 52.6 59.73 75.94 11.68 29.14 3.75 59.99 87.03 35.71 12.35 28.68 10.36 26.19 9.28 16.33 15.43 57.29 62.32 40.57 41.63 46.78 51.65 91.52 77.23
23.77 32.8 38.09 55.76 20.9 28.93 56.63 53.37 27.54 34.94 26.31 35.57 19.2 65.57 12.22 23.55 2.95 57.65 90.56 24.02 13.19 18.16 10.09 48.83 12.9 12.95 16.13 37.06 57.8 62.52 46.05 81.13 33.94 47.39 41.6
14.99 18.23 14.5 21.5 11.95 19.95 30.08 12.29 21.16 22.12 18.19 16.62 10.44 24.18 12.84 7.06 10.89 25.13 39.37 12.77 1.76 5.34 2.04 13.88 11.98 7.2 5.89 10.83 23.04 16.24 8.04 28.14 17.91 40.71 32.63
23.48 19.12 12.54 15.23 13.38 25.42 20.98 14.47 23.5 23.86 7.47 7.56 22.79 8.9 5.23 4.47 1.2 30.95 28.37 4.72 14.99 7.17 6.92 6.12 3.87 4.12 5.25 16.9 16.32 18.88 7.13 34.12 10.03 11.04 27.71
15.49 19.87 11.76 19.74 11.75 17.41 23.01 11.23 19.88 19.46 7.79 8.72 13.08 5.89 7.77 6.29 3.67 22.63 27.19 11.24 5.53 7.65 4.18 9.34 3.61 7.29 5.93 21.62 12.54 12.66 9.66 14.76 11.15 18.73 32.21
14.59 19.24 12.57 19.34 8.54 16.88 18.59 9.37 19.95 19.67 6.34 7.88 3.57 2.32 0.48 1.96 0.0 17.06 12.41 2.23 2.11 2.14 2.55 3.72 1.73 8.0 5.72 38.95 15.74 7.73 9.36 7.27 10.85 3.28 14.17
4.82 15.18 5.58 14.61 7.32 7.54 15.14 7.14 7.4 4.94 2.67 4.32 10.56 1.86 1.22 4.5 0.16 12.3 15.04 2.75 0.88 2.28 0.75 4.35 3.37 5.89 2.73 10.8 3.62 7.9 6.84 9.16 4.5 1.87 6.14
6.97 9.85 5.88 9.79 6.92 5.77 9.55 7.71 7.81 7.72 5.59 8.95 12.37 4.89 5.51 3.82 3.07 16.0 14.53 5.01 5.48 10.17 2.81 4.96 1.4 5.77 5.69 4.11 3.22 12.68 5.0 17.8 8.18 16.46 15.37
21.1 38.04 18.83 36.06 27.03 29.02 40.9 21.17 34.96 39.76 22.15 26.02 24.7 23.18 12.73 20.44 8.52 30.83 41.85 27.76 27.06 43.81 26.61 22.31 15.58 12.87 7.05 35.52 29.71 25.94 27.69 24.26 27.57 19.45 30.94
9.72 16.26 7.88 16.08 9.05 11.43 19.92 8.97 14.89 15.65 2.11 3.64 15.65 2.29 4.63 9.48 0.33 18.82 23.36 7.94 4.83 4.78 3.62 5.11 5.35 9.61 4.47 20.68 10.68 8.78 8.16 10.54 4.09 8.83 9.25
15.06 21.5 11.16 24.57 15.81 16.41 31.69 9.07 27.33 24.68 9.37 10.56 36.09 4.86 5.08 11.92 0.27 33.22 29.17 10.58 10.87 9.26 16.11 10.06 13.12 11.89 11.9 46.33 17.43 14.56 13.75 19.03 12.28 11.73 22.52
5.58 9.12 3.2 9.99 6.43 8.4 11.52 6.4 11.26 10.68 2.94 3.2 3.11 2.79 0.15 0.5 0.06 17.37 13.62 0.93 0.62 0.77 0.76 1.59 0.36 5.51 4.34 36.21 10.4 2.34 4.44 1.43 3.94 1.65 8.89
3.29 2.5 2.67 2.35 1.44 4.44 2.9 3.33 4.36 5.34 2.85 3.31 1.13 0.82 0.47 1.18 0.11 5.02 10.22 0.28 1.65 1.83 1.93 1.26 0.33 0.34 0.62 1.42 4.85 2.93 0.85 5.84 3.56 9.98 1.97
5.35 10.84 6.47 11.98 7.96 8.57 13.42 4.88 9.11 10.48 8.07 12.29 6.63 10.31 3.21 6.06 3.19 12.79 17.53 7.77 1.82 6.73 2.01 5.7 5.7 6.12 3.03 7.88 9.64 8.13 4.5 11.74 11.61 17.31 12.72
31.42 37.62 29.79 40.73 27.62 41.38 43.07 71.05 41.68 38.39 34.08 39.42 28.91 28.41 33.31 24.93 27.03 40.39 43.58 24.2 16.02 25.7 12.87 51.48 24.57 22.87 26.44 30.27 30.82 44.65 37.23 45.94 37.59 64.0 80.01
28.19 35.38 22.84 37.18 23.78 31.5 44.9 20.36 33.62 37.59 29.24 32.29 27.88 26.22 14.52 18.73 9.66 35.18 42.75 18.8 10.64 21.76 14.8 36.68 22.64 7.98 6.52 46.55 28.5 32.07 20.71 46.56 29.66 43.16 48.17
30.75 38.69 34.76 46.22 20.34 35.03 46.2 56.32 39.87 46.55 42.83 42.16 24.62 30.14 21.63 32.63 10.7 40.98 45.15 13.38 15.75 26.4 18.15 54.2 25.03 17.18 24.91 53.17 25.23 42.03 28.59 53.39 39.07 62.61 71.21
25.8 43.19 26.29 48.17 27.64 30.52 56.78 23.48 39.08 42.2 21.8 25.98 26.16 21.36 15.24 15.78 13.61 39.3 42.79 21.06 15.16 26.34 21.98 37.91 25.41 15.09 14.43 44.68 22.63 42.78 26.6 48.17 30.63 36.27 48.62
36.95 51.69 36.13 55.95 24.57 48.97 73.18 33.76 51.51 54.69 39.07 59.35 66.44 43.68 44.59 24.77 47.16 70.09 66.31 54.24 16.73 26.26 18.34 93.3 41.67 17.69 15.43 62.99 42.97 54.26 31.08 70.12 55.51 159.24 129.61
19.78 22.65 15.97 26.17 21.51 23.84 29.02 13.79 27.93 29.24 15.61 21.21 25.07 9.38 32.67 19.86 38.42 33.69 47.41 13.79 10.37 12.07 9.84 21.68 6.92 14.21 10.2 47.32 18.91 11.75 8.63 11.02 24.26 35.44 68.47
13.8 17.69 11.91 17.99 9.41 14.77 25.7 15.98 15.42 16.89 27.5 31.49 19.6 27.93 7.86 7.53 6.7 26.57 23.97 12.87 8.73 17.23 12.61 17.57 7.14 9.37 9.63 13.67 36.54 28.07 19.78 37.56 37.5 36.82 30.99
28.51 30.42 20.92 26.98 15.3 31.41 25.25 20.71 26.06 26.93 10.47 15.39 23.58 14.56 11.27 14.27 1.2 39.46 35.78 9.12 12.56 12.71 9.76 10.87 3.07 4.33 4.47 23.46 13.32 22.64 10.58 29.8 15.18 33.75 48.64
16.0 17.32 12.34 15.1 15.9 16.92 15.24 11.5 18.44 18.03 7.4 9.23 5.11 6.8 4.68 7.41 1.21 18.82 30.83 4.99 7.11 13.84 8.1 7.9 2.46 11.36 12.24 25.59 9.37 6.59 10.17 5.69 7.82 15.71 13.64
20.63 28.61 21.5 35.51 7.97 22.4 34.23 13.65 23.12 25.43 11.38 14.88 17.15 6.09 6.97 12.54 1.15 24.89 23.94 7.42 3.36 7.21 3.45 6.4 1.98 3.25 3.09 27.41 6.33 7.75 4.8 13.11 16.63 23.72 26.85
25.23 40.09 26.08 55.82 13.07 28.37 71.72 37.11 32.74 34.87 42.45 55.96 41.38 67.9 14.87 21.79 4.3 60.92 98.23 35.47 33.36 49.94 26.82 36.36 16.44 11.7 5.66 61.21 45.62 36.57 21.4 64.3 58.89 73.28 64.37
10.57 18.34 12.56 20.99 8.36 14.93 19.55 14.59 14.56 16.72 10.31 13.67 7.88 8.54 11.55 12.27 7.07 16.01 21.79 16.72 5.35 8.08 5.38 20.8 13.49 11.11 7.56 17.2 17.56 17.46 17.3 17.38 15.1 12.49 34.11
17.41 30.37 18.55 38.48 15.48 28.47 41.52 27.43 29.46 31.09 10.07 11.62 14.19 12.69 4.16 11.11 0.68 34.19 57.0 12.04 17.97 18.11 6.54 13.21 6.17 14.6 28.29 25.72 33.38 30.73 27.46 32.37 12.68 17.55 42.5
35.83 46.28 29.65 47.37 43.57 43.43 54.55 33.15 45.66 43.7 40.72 42.04 37.81 38.85 22.95 25.38 7.5 50.27 54.8 28.95 28.67 44.85 33.26 36.71 31.86 26.85 21.54 53.03 32.77 44.53 34.44 50.91 40.55 55.69 49.77
4.37 5.51 4.24 6.31 7.8 7.49 6.33 6.27 9.06 8.0 7.87 8.65 22.27 3.45 4.59 2.69 1.94 16.36 15.23 2.78 4.03 4.19 2.88 4.36 1.67 1.74 1.18 3.02 5.93 9.14 3.12 12.06 10.21 20.33 17.62
27.56 32.24 23.61 28.48 19.23 24.61 25.9 51.49 20.58 25.61 23.28 26.88 23.33 9.04 15.25 11.8 11.58 26.04 25.3 15.3 8.02 16.01 7.62 18.95 7.65 19.24 22.64 21.79 19.99 25.48 23.06 24.41 27.58 34.0 31.51
54.55 63.92 41.88 66.14 27.46 60.23 101.14 38.5 50.76 61.66 38.49 38.98 16.79 24.0 14.77 17.18 6.24 50.89 38.54 9.21 8.86 25.59 11.84 9.01 1.75 11.03 8.32 4.44 12.1 14.83 11.69 23.7 34.74 41.16 41.64
14.93 21.07 14.94 27.98 20.9 21.25 34.19 21.4 25.12 23.83 10.98 15.37 14.94 19.44 11.37 10.55 4.29 38.42 50.01 13.83 3.46 8.61 5.46 22.76 13.35 13.17 19.74 11.95 42.45 36.03 17.95 52.27 16.75 28.15 33.68
10.31 16.87 10.04 18.75 15.18 16.98 23.26 12.38 19.67 19.66 12.68 15.04 28.11 18.23 7.32 9.29 3.11 24.5 29.15 20.99 8.39 11.67 8.75 18.27 8.33 11.54 11.42 14.03 31.96 28.71 26.09 28.54 16.8 23.61 25.27
9.76 11.78 9.71 14.25 15.33 14.65 15.4 13.87 16.3 18.48 5.2 6.5 5.09 4.74 4.38 6.55 2.92 14.06 20.47 13.26 3.69 7.49 1.17 5.64 1.46 6.33 2.89 17.18 8.19 7.45 7.87 4.94 8.05 8.26 26.8
8.34 13.37 8.27 15.15 9.13 9.33 17.66 8.42 11.34 14.32 10.65 15.46 5.67 6.67 4.51 8.85 2.64 13.93 25.04 6.44 0.8 3.67 1.15 3.29 1.35 8.35 6.35 24.67 10.01 8.79 8.27 9.76 15.13 17.88 19.76
11.37 18.49 12.79 21.74 7.73 13.28 20.96 23.73 13.6 16.72 5.3 6.91 7.85 8.46 3.78 7.31 1.24 17.73 29.77 3.67 9.99 10.92 5.89 4.65 1.94 5.64 1.76 12.69 12.49 11.31 9.3 14.1 8.11 13.85 8.19
39.85 53.52 34.54 77.52 38.45 45.68 73.37 70.94 55.65 48.21 24.29 26.41 83.55 21.83 29.6 32.5 15.36 113.24 159.23 63.38 34.77 24.51 27.05 52.23 35.98 24.3 24.24 63.71 36.71 57.79 48.52 56.15 29.68 72.42 125.08
10.91 13.62 7.24 12.39 12.01 13.94 20.41 8.93 13.0 16.64 6.23 8.86 12.81 11.36 3.16 4.38 0.64 28.29 34.91 3.9 7.91 8.09 6.64 3.2 1.24 2.28 1.46 19.0 14.09 10.65 4.24 17.66 9.41 10.8 18.88
15.57 25.07 12.38 22.42 17.06 21.61 30.84 14.67 24.59 24.38 12.42 15.33 16.97 12.39 9.8 11.57 4.23 24.86 37.9 17.46 35.58 28.96 26.31 20.66 18.29 8.2 5.65 35.73 22.1 25.55 21.6 27.9 14.89 15.22 18.15
11.44 17.94 10.09 18.34 9.92 16.75 21.8 8.26 18.63 21.13 10.96 14.49 8.64 7.96 4.72 10.51 0.59 20.56 29.12 7.42 4.81 8.06 8.14 6.47 4.01 3.17 1.68 29.2 17.13 9.21 6.79 11.81 15.69 9.81 18.35

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)