Heatmap: Cluster_55 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
-3.43 -1.05 -2.24 -0.7 0.62 -1.26 -0.38 -0.95 -1.47 -0.61 -0.25 0.05 0.78 -0.35 0.02 -0.24 -1.31 1.21 1.12 -0.45 1.98 0.83 2.46 -0.14 -0.15 -2.99 -4.65 -1.77 -0.5 -1.3 -1.7 -0.67 -0.06 -1.53 -0.68
-0.9 -0.09 -1.11 0.04 -0.0 -0.28 0.34 -0.95 0.22 0.51 -1.03 -1.04 -3.67 -0.34 0.07 0.98 0.27 0.6 0.05 0.07 0.89 0.97 0.58 0.4 0.1 -1.22 -2.46 -0.0 -0.16 -0.01 0.36 0.39 -0.62 -0.15 -0.3
-0.94 -0.93 -0.93 -0.32 0.18 -0.81 -0.2 -0.83 -0.36 -0.65 0.78 0.96 -2.98 -1.04 -0.75 -1.06 -2.39 -0.26 -0.15 -1.15 1.29 1.36 2.38 -0.85 -1.53 0.54 0.69 0.44 -2.04 -1.38 -1.44 -0.79 1.04 -0.05 -2.07
-0.03 0.31 -0.48 0.03 0.26 0.37 -0.02 -0.26 0.3 0.28 0.27 0.44 -3.54 -1.42 -0.3 -0.98 -0.92 -0.07 -0.0 -1.02 1.74 1.69 1.23 -0.44 -1.4 -1.12 -1.36 0.61 -1.24 -1.2 -0.86 -1.69 0.48 -2.34 0.33
-0.55 -0.42 -0.77 -0.33 -0.06 0.05 -0.18 -0.41 0.5 0.32 -1.3 -1.16 -2.36 0.39 0.1 -1.02 -0.94 0.64 0.46 -1.64 1.58 0.83 2.36 0.6 0.5 -0.63 -0.99 -1.13 -1.23 -0.77 -0.34 -1.0 -1.21 -1.94 -0.46
-0.16 -0.24 -0.02 -0.67 0.51 -0.44 -1.17 -0.34 -0.18 -0.04 0.42 0.21 -1.05 -1.32 -1.7 -1.63 -3.67 -0.04 0.3 -2.02 1.41 0.61 2.86 -0.69 -0.27 -1.26 -1.44 0.14 -0.32 -1.45 -0.98 -1.21 0.38 0.01 -0.65
-1.64 -0.93 -1.97 -0.9 -0.49 -1.24 -0.43 -1.53 -0.95 -0.72 -1.49 -1.33 0.45 -1.39 -1.44 -1.01 -3.04 0.83 0.54 -1.33 2.08 -0.17 2.29 0.48 1.15 -0.41 -0.55 -0.11 -0.07 0.11 -1.35 0.92 -1.45 0.63 -0.55
-1.38 -0.01 -1.33 -0.38 0.32 -0.5 -0.42 -0.26 -0.14 0.7 -0.75 -0.4 0.51 -1.39 -0.77 -1.42 0.86 0.6 0.33 0.73 -1.6 -0.95 -0.88 0.61 -0.41 0.38 -1.54 0.94 2.13 -1.2 -1.21 -0.81 -0.24 -0.98 0.71
1.08 1.21 0.83 0.76 -0.2 1.14 0.45 0.25 0.71 0.57 -0.91 -0.57 -2.24 -0.22 -0.18 -1.32 -1.68 0.3 0.13 -1.65 0.98 1.06 0.21 -0.03 -1.77 -4.66 -5.62 1.14 -1.41 -1.06 -2.1 -0.54 -0.45 -4.11 -0.95
-0.11 0.19 -0.31 0.34 0.27 0.36 0.02 -0.23 0.22 0.4 0.87 1.06 -1.22 -0.55 -1.21 -0.87 -2.67 -0.42 -0.51 -1.04 1.57 0.43 2.07 -0.85 -0.2 -2.47 -3.75 -0.95 -0.81 -3.68 -3.41 -3.79 0.9 0.33 0.34
-1.04 0.08 -1.32 -0.17 0.35 -0.31 0.29 -1.68 0.17 0.18 0.7 0.57 -4.01 -1.47 -1.96 -0.51 -2.99 -0.35 -1.0 -0.41 1.95 1.33 2.32 0.1 0.5 -3.97 -4.5 -0.04 -1.42 -1.82 -3.05 -0.51 0.88 -0.2 -0.96
-2.72 -2.01 -2.84 -1.73 -0.24 -1.49 -1.2 -2.34 -0.69 -0.19 0.76 1.06 -3.52 0.41 0.64 -0.17 -2.34 0.29 -0.74 -1.14 1.99 0.65 2.92 -0.64 -0.16 -1.05 0.02 -1.99 -1.55 -2.1 -1.27 -2.8 1.05 -3.07 -0.03
0.12 0.73 -0.04 0.12 1.38 0.45 0.35 -0.33 0.35 0.59 0.07 -0.37 -0.43 0.28 -1.29 -2.33 -0.99 0.29 0.67 -1.62 1.84 0.5 1.54 -1.37 -1.52 -5.95 -4.94 -1.98 -0.37 -0.91 -0.55 -0.55 -0.58 -0.43 -1.66
-0.48 -0.08 -0.87 0.16 0.51 -0.1 0.54 -1.0 0.87 0.47 0.51 0.9 -0.24 -0.2 -0.66 -0.07 -2.24 0.58 0.08 0.8 0.19 -0.21 0.06 -0.14 -1.88 -1.28 -2.71 0.94 -0.05 -2.52 -3.27 -1.73 1.05 0.35 0.55
-2.52 -1.13 -2.13 -0.58 0.8 -0.55 -0.97 0.23 -0.95 -0.2 0.4 0.56 -3.4 1.2 0.15 -0.5 -3.14 1.04 0.2 0.39 0.8 0.83 2.18 -0.24 0.44 -2.13 -2.86 0.37 -0.8 -1.04 -1.56 -1.88 0.56 -1.51 -0.09
-1.49 1.52 -0.66 1.6 -0.82 -0.53 1.48 -0.75 -0.24 0.89 -1.31 -0.71 -3.13 -1.74 -1.08 0.77 -3.04 2.01 1.97 -2.33 0.89 0.64 0.33 -2.4 -4.65 -3.87 -6.77 -1.86 -2.51 -1.2 -3.04 -0.24 -0.55 0.32 -2.88
-0.27 0.58 -0.54 0.77 -0.21 -0.13 0.91 -0.83 0.31 0.35 -0.4 -0.21 -2.01 1.37 -0.82 -1.4 -2.25 0.05 0.34 -1.22 1.5 1.54 0.81 0.65 -1.91 -2.51 -2.85 -0.03 -1.52 -0.76 -2.24 0.18 -0.48 -4.37 0.6
-0.87 -0.37 -0.91 -0.23 -0.08 -0.7 -0.54 -0.86 -0.44 -0.1 -0.07 0.28 -1.33 -0.5 -1.15 -0.68 -1.98 0.29 0.28 -0.72 1.55 1.42 2.07 -0.62 -0.6 -2.38 -3.51 0.15 -1.0 -0.94 -0.95 -0.61 0.23 1.45 0.64
-0.45 -0.34 -0.71 -0.17 -0.72 -0.35 0.21 -0.87 -0.45 -0.08 1.14 1.62 -0.82 1.01 -0.12 -0.92 -0.76 -0.39 -0.01 0.21 0.32 1.05 -0.35 -0.77 -2.37 -1.48 -1.94 -0.54 -1.04 -0.64 -1.16 -0.22 1.47 0.65 0.54
-0.69 -0.19 -0.06 -0.16 0.24 -0.07 -0.47 -0.02 -0.42 0.23 -0.56 -0.28 -1.91 0.03 0.44 -0.99 -2.7 0.93 0.56 -0.67 1.18 0.75 2.15 0.83 -0.32 -1.65 -1.67 -2.54 -0.82 -0.13 -0.59 -0.18 -0.24 -1.52 0.1
-0.94 -0.79 -1.31 -0.92 1.02 -0.65 -0.8 -1.51 -0.15 -0.4 1.43 1.62 -2.7 1.25 -1.68 -2.21 -2.25 -0.39 -0.84 -1.47 1.8 0.99 1.56 -1.09 -1.55 -1.9 -3.28 0.06 -1.23 -3.88 -4.21 -3.21 1.4 -0.85 1.33
-0.69 -0.51 -0.66 -0.46 -0.12 -0.56 -0.08 -1.76 0.12 -0.0 0.38 0.2 -0.81 -0.16 0.68 -0.72 0.01 0.43 0.3 -1.3 1.47 1.59 0.98 -1.19 -0.82 -0.69 -1.42 -0.64 -2.21 -1.37 -1.36 -1.03 0.19 1.9 -0.91
-1.0 -0.41 -1.27 -0.23 0.23 -0.61 0.09 -1.39 -0.1 -0.23 -0.4 -0.28 0.43 0.21 -0.71 -0.41 -0.87 0.62 1.22 -1.36 1.68 -0.63 1.14 -0.31 0.81 -0.88 -1.72 -1.51 -0.58 -0.34 -1.3 0.35 -0.13 1.09 0.23
-1.26 -0.48 -1.05 -1.44 -0.28 -0.49 -2.09 0.96 -1.29 0.04 1.29 1.8 -1.27 1.22 -1.18 - -2.87 0.33 -1.38 -1.85 1.61 1.12 1.05 1.22 -4.01 -3.41 -1.82 0.35 -0.78 -2.14 -2.03 -2.42 1.48 -1.68 -0.02
0.18 0.16 0.34 0.51 -0.24 0.3 0.26 -0.1 0.61 0.43 -0.09 -0.08 -0.32 -0.35 -0.77 -0.43 -2.02 0.28 -0.13 -0.07 1.29 0.13 1.61 0.62 -0.38 -1.92 -3.34 0.17 -0.15 -1.13 -0.94 -1.29 -0.09 -1.14 -0.35
-1.74 -0.95 -1.19 -0.27 -0.35 -1.44 -0.61 -0.51 -1.27 -1.02 -1.07 -0.97 1.02 0.42 -1.87 -0.83 -3.16 0.57 0.26 -0.93 2.06 0.44 2.65 -0.66 -0.18 -2.34 -2.89 -1.37 0.48 0.12 -0.81 0.92 -1.62 0.32 -1.09
-0.16 -0.22 -0.7 -0.02 0.46 -0.27 0.3 -0.7 0.05 0.16 0.62 0.59 -3.3 0.94 -1.65 -1.69 -3.99 -0.81 -1.13 -0.64 1.37 1.08 1.88 0.75 -0.09 -2.17 -2.11 0.98 -0.43 -1.32 -0.75 -1.62 0.29 -1.69 -0.03
0.86 0.8 0.45 0.48 -0.41 0.51 0.62 0.04 0.38 0.62 -2.59 -2.48 -3.79 -2.72 0.51 0.29 -0.35 0.35 0.65 -1.74 0.78 2.08 0.29 0.69 -1.95 -1.18 -0.2 0.66 -0.78 -1.29 -1.52 -1.18 -2.98 -5.06 -3.85
-0.97 0.49 -0.68 0.17 0.13 0.58 0.43 -0.01 0.71 0.76 -1.02 -1.55 -0.31 -1.66 0.45 -0.07 -0.65 0.6 0.93 -0.42 1.06 0.03 1.4 0.43 -0.24 -1.06 -2.49 -0.68 -0.41 -0.27 -0.28 -0.77 -1.39 0.01 -1.35
-1.01 -0.07 -0.5 0.12 0.75 -0.39 0.29 -0.42 -0.11 0.23 -0.27 -0.65 -0.86 -1.0 -1.69 -2.11 -3.33 0.04 0.55 -0.9 1.98 0.79 2.74 -0.95 -0.22 -1.4 -1.24 -1.58 -0.04 -1.68 -1.41 -1.5 -0.67 -1.0 0.05
-0.72 -0.65 -1.43 -0.25 1.51 0.99 0.19 -0.35 0.92 0.95 0.14 0.17 -1.75 -1.13 0.42 0.27 -2.42 0.05 -0.03 -0.09 0.85 1.02 1.42 -0.75 -2.01 -4.02 -4.86 0.72 -1.67 -2.7 -2.03 -3.04 0.38 -2.67 0.94
-0.97 -0.6 -0.97 -0.02 -0.44 -0.36 0.05 -1.04 0.02 0.06 0.14 0.48 -0.77 0.2 -0.88 -0.66 -3.08 0.47 0.26 -0.07 0.69 0.22 1.23 -0.43 -0.55 -1.14 -0.47 1.05 -0.03 -0.97 -1.4 -0.43 0.41 -0.51 1.91
0.67 -0.16 0.1 -0.94 0.61 0.69 -0.88 -0.35 0.17 0.51 -5.11 -6.31 -0.95 - 1.14 -0.71 0.34 0.94 0.93 -1.2 1.79 0.87 0.77 0.34 -1.62 -0.62 0.56 -0.55 -0.59 -0.07 -0.41 0.24 -5.88 -5.11 -7.63
-0.87 0.32 -0.68 0.54 0.46 -0.24 0.66 -0.48 0.12 -0.92 0.45 0.95 -0.88 0.24 -0.62 -1.15 -1.63 0.43 0.96 -1.38 1.38 0.49 1.52 -0.43 -1.26 -1.43 -2.41 0.57 -1.64 -1.88 -2.49 -1.47 0.37 -1.86 1.07
-0.75 -0.46 -1.12 -0.47 -0.17 -0.19 -0.07 -0.85 0.29 0.18 -0.1 -0.35 -0.72 0.44 -1.24 -0.77 -3.74 0.74 0.27 -0.86 1.46 0.49 2.12 -0.7 -0.64 -2.26 -2.82 0.35 -0.35 0.03 -1.5 0.72 -0.48 -0.31 0.97
-0.76 0.87 -0.01 1.01 -0.46 -0.13 0.78 0.55 -0.12 0.64 -1.63 -1.28 -0.53 -1.97 -1.09 -0.03 -4.09 1.27 1.0 -0.4 1.41 0.64 1.61 0.24 -0.8 -2.34 -3.44 -0.3 -0.02 -0.79 -0.64 -0.26 -1.4 -1.7 -3.74
-0.5 0.07 -0.09 0.3 -1.06 -0.85 -0.24 0.21 -1.29 -0.37 1.26 1.58 -1.43 2.25 -1.12 -0.97 -2.58 0.27 0.31 -2.19 1.21 0.25 0.52 -1.36 -3.11 -6.06 -4.7 -2.28 -0.82 -2.42 -2.06 -3.15 1.49 -0.79 1.25
-2.29 -1.58 -0.86 -0.62 0.01 -1.22 -0.89 -1.93 -1.16 -0.23 -0.28 -0.29 -2.62 -1.62 -1.71 0.04 -1.29 0.04 -0.21 -1.82 2.82 0.35 3.27 -0.82 0.12 -1.68 -2.74 -3.31 0.91 -2.94 -1.76 -2.74 -0.33 -3.43 -2.81
-6.06 -3.79 -5.16 -3.68 0.12 -6.08 -5.79 -4.25 -6.47 -5.47 1.28 0.78 0.21 -0.18 -2.28 -4.23 -3.36 -1.37 -0.65 -2.97 3.01 -0.63 2.3 -0.71 1.96 -0.39 0.27 -5.44 -1.77 -1.2 -2.06 -0.9 0.25 1.03 0.05
-1.14 -1.08 -1.6 -0.63 0.65 0.03 0.01 0.36 -0.0 -0.0 -0.94 -0.71 -0.22 -1.24 0.3 -0.01 -1.57 0.55 0.42 0.26 0.89 0.35 0.76 0.95 -1.04 -0.95 -2.24 1.49 -0.78 -0.69 -1.74 -1.27 -0.69 -0.85 1.75
-0.66 0.03 -1.2 0.38 0.58 -0.7 -0.14 -1.12 -0.72 -0.29 -1.11 -1.0 -3.83 -1.41 -0.41 -0.6 -2.13 1.16 0.9 -0.71 2.05 0.97 2.47 -1.8 -0.08 -2.09 -3.11 -0.56 -0.5 -0.36 -0.3 -0.16 -0.54 -1.13 -0.5
-0.38 -0.27 -0.61 -0.57 -0.57 -0.66 -1.27 -1.34 -0.05 -0.7 -2.67 -3.06 -0.29 -3.59 -0.61 -1.5 -1.18 1.48 0.79 -1.99 2.44 -0.28 2.09 0.16 0.85 -2.06 -2.45 1.07 1.0 -0.14 -1.17 0.48 -3.23 -3.77 -3.58
-0.52 0.69 -0.68 0.63 -0.7 0.06 0.35 -0.09 0.05 -0.41 -0.78 -0.59 -3.16 -1.09 -0.79 -1.81 -0.31 -0.11 0.48 -0.35 1.94 1.17 1.55 -0.11 0.04 -2.3 -3.03 0.64 -1.49 0.8 -1.17 1.08 -0.72 -4.47 -3.38
0.09 0.4 -0.38 0.31 0.24 0.22 0.27 -0.48 0.2 0.4 -0.17 -0.21 -1.56 0.54 -0.39 -0.06 -2.09 0.48 0.56 -0.85 1.32 0.79 1.28 -0.96 -0.12 -1.33 -1.74 -0.03 -1.06 -0.71 -1.24 -0.34 -0.25 -1.2 0.67
-1.15 -0.88 -0.94 -0.31 -0.8 -0.59 -0.17 -0.73 -0.6 -0.23 0.4 0.82 -1.64 -0.36 -0.47 -1.47 -2.14 0.25 -0.63 -1.18 0.92 1.61 0.97 -0.66 -1.54 -0.7 -0.72 -1.18 -1.81 -0.36 -1.13 0.3 0.55 0.41 2.48
-4.2 -2.39 -3.65 -1.92 1.68 -3.46 -0.83 -2.98 -1.91 -1.81 -7.19 -5.43 -3.72 -4.89 -1.45 -1.68 -2.84 1.96 -0.02 2.23 2.65 0.67 2.16 -2.27 -0.66 -1.76 -3.33 -1.82 0.53 0.08 -1.8 1.31 -5.27 -6.36 -2.46
-3.77 -0.71 -2.43 -0.78 -1.42 -1.68 0.99 -1.18 -0.2 0.21 -1.0 -0.23 -2.26 -0.05 -1.9 -2.39 -2.0 0.53 0.78 0.89 2.39 1.84 1.09 1.21 -1.16 -1.22 -2.27 -1.39 -0.97 0.02 -1.55 1.32 -0.48 -3.72 -1.95
-0.44 -0.13 -0.07 -0.34 0.57 -0.65 -1.09 -1.07 -0.26 0.18 0.66 1.05 0.2 -0.68 -1.76 -1.26 -2.0 -1.2 -1.5 -0.3 1.44 0.91 1.73 -0.26 0.34 0.58 0.35 -0.35 -0.49 -0.4 -0.42 0.05 0.56 -2.51 -3.01
-1.47 -1.22 -1.5 -1.36 0.49 -0.68 -1.46 -0.87 -0.89 -0.49 1.67 1.64 -3.1 0.98 -0.54 -0.33 -2.04 0.9 0.5 -1.15 0.64 0.51 0.31 0.04 -0.54 0.8 -0.43 -1.34 -0.46 -0.64 -0.52 -0.23 1.76 -2.77 -2.65
-1.21 -0.6 -1.22 -0.29 -0.62 -1.0 -0.32 -1.98 -0.26 -0.24 1.25 1.51 0.13 1.51 -0.64 -0.42 -1.11 1.13 0.8 -0.51 -0.0 -0.02 -0.09 -0.2 -0.99 -0.66 -1.73 -1.45 -1.34 -0.84 -1.27 -0.07 1.4 0.61 0.05
-1.38 -1.54 -1.0 -0.82 -0.29 -0.55 -1.37 0.09 -0.61 -0.53 -0.25 -0.15 -0.03 0.36 -0.14 0.57 -0.32 -0.05 -0.75 -0.27 -0.22 -1.18 -0.08 0.88 -0.89 0.16 -0.28 1.27 0.98 -1.09 -0.42 -1.91 -0.06 0.82 2.06
-3.01 -1.97 -3.34 -2.54 -0.64 -2.14 -2.64 -0.24 -2.05 -2.12 1.54 1.97 -3.7 1.45 0.18 -1.27 -0.71 1.16 0.64 -0.17 0.06 0.32 -0.79 1.29 -1.02 0.85 -0.61 -3.55 0.08 -0.34 -0.35 -1.54 1.91 -1.57 -2.97
-0.91 -0.41 -0.64 -0.34 0.74 -0.84 -0.71 -0.62 -0.62 -0.84 0.25 0.47 -2.59 0.17 0.11 0.22 -0.3 0.57 1.31 -0.28 1.39 -0.41 1.89 -0.76 0.84 -2.52 -3.8 -0.11 -0.34 -2.04 -2.36 -1.09 0.37 0.15 0.16
0.75 1.11 0.19 0.91 0.13 1.11 1.06 -0.15 1.1 1.0 -1.81 -1.61 -4.1 -0.95 -0.36 -0.68 -2.46 0.89 0.54 -0.32 1.56 0.51 1.04 -1.02 -2.38 -1.97 -3.21 -1.4 -0.61 -0.82 -1.79 0.22 -1.53 -10.15 -7.4
-4.58 -5.3 -2.98 -2.45 0.09 -2.0 -2.56 -2.7 -2.06 -1.46 2.03 2.21 -1.36 2.45 -1.82 -1.95 -3.36 -0.52 -0.89 -1.42 0.84 -0.01 0.45 -0.64 -2.72 -3.1 -0.5 -5.35 -0.72 -1.92 -2.29 -1.3 1.86 -1.47 2.1
-3.21 -2.56 -3.72 -3.12 0.48 -2.9 -2.29 -3.73 -2.06 -1.27 -0.32 -0.6 -6.58 -1.99 0.53 0.81 -1.95 1.68 1.3 -0.33 2.05 1.33 2.01 -0.22 -0.52 -5.88 -6.27 -0.44 0.86 0.33 -0.04 1.13 -0.23 -3.81 -2.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.