Heatmap: Cluster_14 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4h after treatment
4h after treatment,No nitrate
8h after treatment
8h after treatment,No nitrate
20C
20h after treatment
20h after treatment,No nitrate
20h after treatment,Nocodazole added
36h after treatment
36h after treatment,No phosphate
Blue light,10min after light change
Blue light,60min after light change
Bohlin
CCAP1055/1,20C
CCAP1055/1,20C,High CO2,OligoDT primed
CCAP1055/1,20C,Low CO2,OligoDT primed
CCAP1055/1,20C,Normal CO2,OligoDT primed
CCMP2561
CCMP2561 Nitrase Reductase Knockout
CCMP632
CCMP632,24h
CCMP632,48h
CCMP632,72h
CCMP632,High light acclimated WT
CCMP632,Low light acclimated WT
NEPCC640,8h,1000ppmv CO2
NEPCC640,8h,390 ppmv CO2
No light,8h after treatment
Pt-1
Pt-1 8.6
Pt-1 8.6,With nitrogen
Pt-1 8.6,Without nitrogen
Red light,0min before light change
UTEX 646,Blue light
UTEX 646,No light
-0.82 -0.82 -0.06 -0.98 0.74 0.58 -0.72 0.54 1.27 1.36 - -39.39 1.14 -31.31 -1.18 0.45 -2.44 -0.4 -0.35 -0.06 -0.9 -0.81 0.95 -0.5 -0.04 -0.29 -0.65 0.39 2.32 -0.05 0.17 -0.15 -32.03 - -34.55
-1.11 -1.2 -0.27 -0.84 0.72 0.21 -0.68 0.13 1.01 0.93 -4.41 -4.07 1.89 -4.49 -0.91 0.96 -1.59 -0.02 0.34 0.06 -1.77 -1.45 -0.83 0.13 0.61 -0.42 -0.59 0.07 2.39 -0.32 -0.35 -0.29 -3.93 -3.39 -2.24
1.48 -0.29 0.53 -0.83 0.42 0.41 -0.03 1.17 -0.81 -0.74 -4.88 -4.04 0.07 -4.56 -1.22 -3.65 -2.19 0.46 0.41 -1.24 -1.64 -0.77 -1.64 -0.76 -2.39 0.56 1.28 -1.4 0.46 1.59 0.23 2.24 -4.5 -0.79 -4.51
-0.55 -0.62 -0.65 -0.84 0.68 0.18 -0.94 -0.44 0.03 0.42 0.03 -0.24 -0.23 -0.91 -0.66 0.8 -0.74 -1.44 -1.08 -0.02 0.54 1.37 0.49 0.55 -0.32 -0.34 -0.51 -0.8 0.8 0.56 0.09 0.84 -0.51 0.26 -1.56
1.88 1.2 1.43 -0.13 -0.93 1.0 -0.51 1.2 -0.7 1.09 -2.81 -1.9 -2.25 -1.01 0.32 1.1 -0.09 -0.29 -0.82 -0.51 -3.8 -2.59 -4.74 -0.4 -2.84 0.76 -0.26 -0.66 -0.32 0.1 0.46 -0.11 -2.34 -0.24 -4.04
1.41 0.17 0.91 -0.52 -0.57 0.94 -0.07 0.2 -0.17 1.09 -1.93 -1.04 -1.27 -1.52 -0.41 1.07 -0.96 0.17 -0.33 0.03 -1.35 -0.68 -1.01 0.8 -1.92 -0.46 -0.54 -3.55 0.69 0.6 0.08 1.11 -1.71 0.48 -4.38
-0.25 -0.05 -0.43 -0.13 0.11 0.17 0.15 -0.44 0.33 0.44 0.3 0.05 -1.44 0.65 -0.62 0.08 -0.54 0.6 0.52 -0.14 -1.13 -0.08 -0.3 -0.62 -0.96 -0.64 -0.77 1.03 0.48 -0.1 -0.22 -0.01 -0.04 0.28 0.48
-5.21 -3.04 -1.36 -2.01 0.92 1.29 -1.36 0.45 2.35 2.09 -3.89 -3.93 -0.41 -0.41 -2.52 2.39 -4.99 -0.27 -1.63 0.36 -0.25 -1.92 1.14 -3.02 -2.4 -2.58 -3.88 -5.08 2.17 -3.63 -4.13 -3.24 -3.69 -2.21 -1.69
-0.9 0.41 -1.27 -0.68 0.85 0.59 -1.06 0.06 0.91 0.54 -0.01 0.47 -1.89 -0.52 -1.05 2.52 -0.89 0.19 -0.17 1.48 -1.96 -1.89 -1.26 -0.26 -2.6 -1.04 -0.33 -2.78 0.26 -1.3 -0.38 -3.51 -1.85 1.37 -1.6
2.0 1.22 1.48 -0.13 -0.85 0.83 -0.55 1.85 -0.85 1.36 -1.9 -0.73 -1.74 -0.22 -0.42 0.66 -0.97 0.11 -0.7 -1.4 -2.13 -1.28 -3.32 -0.97 -3.51 0.08 -1.32 -1.49 -0.18 -0.1 0.04 0.24 -1.45 -0.45 -6.22
0.55 0.82 0.28 0.67 -0.09 0.9 0.9 0.38 1.21 1.28 -0.96 -0.53 -0.74 -2.06 -0.83 0.9 -2.09 -0.45 -0.66 -0.27 -0.45 -0.69 -0.37 -0.64 -2.63 -1.67 -2.68 1.43 -0.53 -0.44 -0.02 -1.26 -0.79 -0.49 0.18
1.48 0.93 1.15 0.66 -0.63 0.66 0.43 2.01 -0.44 -0.14 -4.6 -3.78 -0.33 -2.1 -2.17 -2.68 -3.88 -0.12 -0.61 -0.08 -6.51 -5.9 -6.98 -1.08 -2.84 0.85 0.93 -0.97 0.55 1.0 0.68 1.31 -3.8 -1.49 -1.77
1.91 1.27 1.27 0.38 -1.64 0.85 0.42 1.16 -0.18 2.03 -2.56 -1.72 -1.79 0.21 -1.18 -0.24 -1.26 0.11 0.2 -1.89 -2.32 -1.5 -3.04 -0.78 -3.11 -1.44 -2.42 -0.45 -0.24 0.16 -0.46 0.76 -1.81 -0.04 -5.41
-0.96 -1.02 -0.9 -0.98 0.98 0.28 -0.83 -0.74 1.3 0.85 -1.03 -0.65 -1.46 -1.43 -0.31 2.48 0.25 -0.58 -0.45 0.26 -2.79 -2.31 -1.68 -0.57 -0.9 -0.46 -0.4 0.14 1.28 -1.01 -0.83 -1.34 -0.56 0.21 1.08
2.09 1.07 1.26 0.64 -0.9 0.98 0.58 0.66 -0.1 0.18 -2.82 -2.78 -1.82 -2.89 -3.15 -4.58 -6.36 0.1 -0.79 -4.05 -4.21 -3.71 -6.37 -1.69 -3.19 0.34 0.71 -0.29 -0.16 1.36 0.21 2.13 -3.32 -0.16 -2.46
-2.34 -1.97 -2.41 -1.98 1.04 -1.33 -1.77 -1.71 0.08 -0.38 0.52 0.63 -2.22 0.56 -2.39 0.78 -3.57 -0.87 -1.56 0.6 -0.26 -1.67 1.84 -1.6 -0.79 -1.59 -1.56 -1.01 3.29 -1.46 -1.53 -1.61 0.26 -0.65 -0.56
-0.19 -0.29 -0.09 -0.19 0.49 1.09 -0.22 -0.1 1.84 1.65 -1.08 -1.34 -0.92 -2.06 -0.92 2.1 -1.85 0.07 -0.38 -0.8 -1.54 -1.71 -0.68 -1.25 -1.92 -0.98 -2.1 0.78 0.71 -1.25 -1.33 -1.09 -0.86 0.1 0.45
-1.68 -1.9 -1.42 -2.47 0.34 0.37 -3.3 -0.34 0.99 0.84 1.72 0.81 -2.7 -2.17 -0.54 2.4 -0.12 -0.99 -0.1 0.57 -2.91 -0.09 -1.52 -1.76 -1.92 -0.37 0.29 -2.13 0.77 0.13 0.61 -3.0 -0.56 1.01 -3.78
-1.31 -0.99 -1.54 -0.76 0.33 0.4 -0.53 -0.98 1.22 1.06 -1.49 -1.19 -0.17 -0.93 -1.73 2.2 -5.53 0.37 0.12 0.4 -1.22 -1.49 -0.71 -1.51 -1.66 -1.97 -1.87 -0.86 2.65 -1.1 -1.56 -0.81 -1.26 -0.57 1.18
-2.66 -2.0 -0.95 -1.29 -0.05 0.93 -1.11 1.2 1.83 1.9 -1.04 -0.72 -0.09 0.37 -1.28 1.29 -3.06 -0.24 -0.67 1.34 0.13 -0.91 0.54 -1.16 -1.06 -3.5 -4.89 -1.99 1.82 -1.65 -2.12 -1.48 -0.98 -0.53 -1.22
-0.03 0.02 0.23 0.01 0.04 0.98 -0.19 0.33 1.5 1.7 -0.59 -0.26 -1.75 -1.26 -0.72 0.43 -4.31 0.33 0.03 -0.31 0.69 0.49 0.71 -1.2 -3.58 -1.81 -2.78 0.15 -0.23 -1.15 -1.05 -1.24 -0.18 0.32 0.33
-3.28 -4.56 0.25 -4.41 0.42 1.93 -4.24 0.85 2.46 2.6 -5.13 -4.83 -5.49 -5.52 -0.1 2.37 -5.1 -0.37 -3.19 0.68 -0.63 -2.35 0.61 -2.5 -4.84 -3.19 -3.72 -4.81 1.74 -4.64 -4.53 -7.24 -4.9 -3.81 -11.22
-2.06 -1.71 -0.27 -0.95 0.1 0.86 -1.0 0.78 1.67 1.9 -0.98 -1.05 -1.54 -0.04 -0.61 1.7 -2.65 0.36 -0.37 0.11 -0.57 -0.43 0.07 -0.66 -1.84 -1.14 -0.72 -1.22 1.51 -1.23 -1.0 -1.85 -1.2 0.69 -0.7
-1.14 -0.81 -0.76 -0.69 -0.03 0.53 -0.26 0.18 1.28 1.28 1.73 0.42 -1.31 0.85 -1.65 1.3 -1.2 -0.87 -0.56 -0.42 -0.58 0.18 -0.62 -0.32 -2.01 -1.94 -2.23 -1.33 0.75 0.37 -0.34 0.14 -0.06 -0.28 -1.2
1.07 0.38 0.63 0.32 -0.17 0.67 0.54 0.4 0.24 0.58 -0.86 -0.49 -0.16 -0.26 -1.38 -1.41 -2.27 0.18 -0.5 -0.45 -1.52 -0.94 -1.48 -0.03 -0.88 -0.8 -0.35 -0.09 0.72 0.86 0.19 1.4 -0.52 -0.35 -0.84
-1.14 -0.4 -0.72 0.16 0.81 1.1 0.68 0.29 1.94 1.79 -0.99 0.14 -1.38 1.08 -1.98 1.82 -1.78 0.02 -0.33 0.12 -1.94 -1.16 -0.8 -2.66 -4.18 -3.52 -4.48 -1.76 0.38 -0.5 -2.07 0.25 -0.24 -0.69 -2.52
-1.31 -0.14 -1.02 0.08 -0.67 0.18 0.61 -0.66 0.85 0.77 0.21 -0.21 -0.77 0.63 -1.56 1.27 -2.72 0.05 0.35 0.26 -1.56 -0.27 -0.84 -0.37 -1.68 -0.93 -1.09 0.4 0.3 0.44 0.39 0.54 -0.26 0.36 0.62
0.45 0.89 0.29 0.76 -0.41 1.31 0.77 0.71 1.47 1.43 -1.84 -1.41 -3.58 -1.57 -1.46 1.77 -2.83 -0.04 0.14 -0.25 -2.98 -1.43 -3.17 -1.18 -2.41 -2.09 -2.73 0.05 -0.13 -0.38 -1.34 0.33 -1.64 0.23 0.5
-0.98 -1.75 0.62 -0.63 0.09 0.68 -1.75 0.02 1.75 1.55 -2.24 -2.34 -3.04 -2.83 -1.67 3.09 -4.07 -1.37 -2.11 0.73 0.52 -1.08 0.82 -1.91 -2.45 -2.33 -1.05 -1.76 1.28 -2.62 -2.32 -4.14 -2.05 -1.11 0.32
-1.61 -0.43 -0.86 -0.08 -0.63 0.19 0.14 0.3 0.61 0.67 -0.6 -0.52 0.15 -0.16 -2.06 1.77 -1.95 -0.43 -0.17 0.45 -4.36 -2.22 -3.4 -0.39 -2.05 -1.08 0.77 -0.59 1.46 0.45 0.17 0.37 -0.52 0.43 1.1
-4.29 -3.55 -3.1 -2.49 0.85 0.98 -1.96 -0.54 2.42 2.39 -1.94 -1.55 -3.25 -2.29 -2.78 2.69 -4.28 -0.46 -1.79 -0.13 0.4 -0.89 1.34 -4.26 -5.38 -4.83 -5.11 -4.35 2.09 -2.66 -3.32 -2.37 -1.63 -3.95 -3.77
-2.37 -2.09 -1.89 -1.74 0.73 1.21 -1.58 -0.19 2.44 2.3 -1.96 -1.57 -3.78 -2.03 -3.13 2.37 -3.49 0.26 -1.93 -0.04 -0.58 -0.86 0.43 -2.16 -2.98 -3.31 -3.02 -1.57 2.23 -1.79 -2.39 -1.37 -1.58 -2.55 -2.12
-1.11 -0.97 -0.94 -1.08 0.49 1.03 -0.88 -0.27 1.87 1.82 -1.34 -0.92 -1.56 -0.47 -2.42 2.28 -4.44 -0.61 -0.77 -0.53 0.01 -0.13 0.37 -1.34 -3.04 -1.6 0.27 -0.81 1.89 -1.41 -1.67 -1.26 -1.02 -1.28 -1.17
- - - - - - - - - - - - - - - - - - -3.58 - - - - - - - - - 5.13 - - - - - -
-0.59 -1.0 -1.32 -2.01 -0.17 0.32 -1.84 -0.7 0.44 0.82 2.32 0.9 -5.54 -3.47 0.24 2.18 0.07 -0.19 -0.0 -1.06 -1.8 0.26 -1.01 -1.26 -3.13 -1.91 -2.29 1.17 0.93 -1.23 -0.61 -1.95 0.66 -0.22 -4.66
-0.16 0.15 -0.04 0.07 0.41 0.99 0.04 0.0 1.43 1.41 -1.71 -1.38 -1.19 -1.63 0.0 1.9 -0.33 0.18 0.4 0.06 0.21 -0.11 0.15 -0.83 -2.13 -2.89 -3.69 0.07 0.46 -1.16 -1.05 -1.1 -1.33 -0.42 -0.64
-0.75 -0.21 -0.44 -0.09 -0.54 0.09 0.41 -0.73 0.66 0.62 0.1 0.45 -0.84 -0.09 -0.26 1.59 -3.03 0.55 0.52 0.13 -1.6 -0.35 -0.74 -0.39 -2.22 - - 0.24 -0.21 0.15 0.34 0.36 0.44 0.74 0.82
-3.25 -3.38 -2.24 -2.95 2.14 -1.82 -2.62 -2.22 -1.16 -1.3 0.9 0.78 -0.83 1.94 -1.57 0.29 -2.63 -1.46 -1.43 0.13 -0.65 -0.68 0.32 -0.11 0.69 -2.19 -1.59 -1.89 1.57 -0.82 -1.48 -0.54 0.5 0.59 1.86
0.51 -0.07 0.59 -0.29 0.48 1.09 -1.11 -0.6 1.57 1.58 -3.38 -3.49 0.3 -1.8 0.56 1.99 0.71 -1.63 -1.69 0.05 -0.73 -0.47 -0.21 -0.03 0.09 -0.14 -0.63 -0.87 0.72 -1.77 -0.69 -3.19 -2.84 -3.43 -9.32
-0.91 -0.46 -0.43 -0.2 0.53 0.66 0.15 0.77 1.33 1.17 -0.41 -0.81 -0.44 -0.81 -1.06 1.77 -0.82 -0.59 0.08 -0.37 -0.26 -0.68 -0.02 -0.34 -1.39 -1.43 -2.23 -0.06 0.77 -0.69 -1.39 -0.44 -0.97 -0.18 0.97
-0.95 -0.99 -0.76 -0.72 0.27 0.65 -0.81 -0.41 1.23 0.87 0.65 0.66 -2.17 1.16 -0.99 1.96 -1.11 -0.67 -0.81 -0.34 -3.5 -2.02 -2.12 -0.55 0.07 -1.35 -1.07 -0.37 0.96 -0.54 -0.27 -0.86 0.64 0.47 0.23
-1.96 -0.87 -1.37 -0.66 0.31 0.6 0.19 -0.67 1.47 1.59 -0.27 -0.06 0.29 1.63 -1.38 1.5 -1.83 -0.21 0.19 0.14 -0.56 -0.22 -0.02 -1.44 -2.73 -2.14 -3.02 -2.16 1.26 -0.9 -2.4 0.08 0.08 -0.43 -0.74
-0.56 -0.61 -0.93 -1.63 0.94 1.09 -1.66 -0.71 2.29 2.03 0.42 -0.38 -5.67 -4.94 -1.36 2.24 -2.26 -0.77 -1.65 0.15 -3.6 -1.81 -0.78 -2.7 -3.7 -1.02 -0.96 0.61 1.64 -1.86 -0.74 -4.49 -0.69 0.02 -6.89
-0.6 -0.46 -0.64 -0.33 0.04 -0.12 -0.32 -0.54 0.5 0.53 0.47 0.27 -1.35 0.38 -1.22 0.2 -1.99 -0.59 -0.26 0.18 0.43 0.43 1.05 -0.28 -0.93 -0.95 -0.76 0.29 1.4 -0.2 0.03 -0.26 0.3 0.1 0.04
-0.34 0.41 -0.15 0.64 0.23 0.84 1.1 0.12 1.39 1.44 -0.11 -0.03 -0.7 -0.63 -0.7 0.85 -0.62 0.29 -0.02 0.43 -0.62 -0.41 -0.75 -2.03 -3.84 -2.18 -2.67 -0.43 0.59 -0.9 -1.74 -0.65 0.23 -0.07 -0.86
-3.06 -2.55 -0.7 -2.71 0.75 1.49 -2.69 0.17 2.48 2.61 -4.14 -3.92 -2.3 -5.56 -2.5 2.77 -5.74 -0.73 -5.48 0.38 -0.23 -3.61 0.57 -5.62 -6.64 -10.07 -9.06 -3.01 2.13 -6.16 -7.21 -6.85 -3.68 -5.39 -4.19
-8.13 -8.58 -2.36 -7.91 0.96 1.06 -8.59 -0.41 2.29 2.37 -8.21 -8.01 -7.59 -8.89 -4.38 3.19 -6.86 -0.71 -8.26 0.74 -1.18 -6.77 0.56 -8.83 -10.98 -12.97 -10.1 -7.0 2.7 -10.5 -11.51 -12.2 -8.0 -11.87 -10.44
-2.87 -2.75 -1.01 -2.53 1.24 1.27 -2.39 0.04 2.5 2.43 -4.35 -4.48 -3.17 -5.79 -2.66 1.89 -4.5 -0.81 -5.19 1.36 -0.7 -1.71 0.92 -5.54 -9.33 -6.68 -6.5 -2.56 2.7 -4.94 -5.03 -5.22 -4.41 -10.25 -8.25
-5.58 -5.46 -2.2 -4.91 1.35 1.16 -4.95 -0.39 2.35 2.47 -9.48 -9.2 -3.69 -7.19 -4.11 1.97 -6.9 -0.84 -7.09 1.51 0.19 -3.73 1.22 -5.31 -9.38 -12.28 -9.58 -6.05 2.88 -7.34 -8.14 -6.79 -9.29 -8.63 -6.78
-3.44 -2.99 -3.4 -3.02 1.43 0.09 -3.05 -1.82 1.87 1.73 -1.09 -1.19 -4.73 -1.25 -2.97 3.15 -3.73 -1.5 -2.9 0.6 -0.09 -0.14 1.65 -2.61 -2.94 -3.02 -3.22 -2.24 2.06 -2.63 -2.27 -3.03 -1.54 -3.73 -2.51
-3.22 -2.79 -2.98 -2.84 2.07 0.39 -2.82 -1.93 1.97 1.66 -2.01 -2.07 -5.06 -2.98 -4.35 3.29 -5.64 -1.18 -2.76 1.06 -1.34 -1.98 0.55 -3.36 -4.01 -2.63 -2.71 -2.22 2.19 -2.64 -1.99 -3.43 -2.19 -4.19 -2.62
-5.79 -4.91 -6.44 -4.68 2.98 -1.59 -3.77 -4.94 0.29 -0.33 -4.19 -3.9 -6.25 -4.05 -6.06 3.45 -6.7 0.44 -4.46 -1.05 -2.76 -4.35 -0.81 -7.24 -7.36 -8.0 -8.22 -5.74 3.39 -5.89 -8.29 -4.76 -3.87 -5.11 -3.79
-0.71 -0.48 -0.62 -0.01 -0.38 0.19 -0.11 -0.32 1.15 1.13 0.44 -0.59 -0.2 -0.98 -1.26 1.34 -2.63 -0.21 0.13 -0.22 -0.16 0.03 -0.66 -0.53 -1.46 -0.01 0.73 -0.5 0.59 0.21 0.33 0.05 -0.76 0.07 0.12
0.83 0.5 0.35 -0.63 -0.24 0.4 -0.67 0.58 -0.77 0.8 0.87 0.92 -1.47 1.11 -0.19 0.34 -0.55 0.67 0.42 -0.98 -4.25 -2.18 -4.55 -0.96 -2.97 0.66 -0.21 -0.16 -0.49 -0.46 0.04 -0.42 0.77 0.56 -3.78
-0.81 -0.53 -2.44 -1.02 0.51 0.95 -0.12 -0.81 1.7 1.37 1.13 -1.39 -1.47 -1.75 -0.75 2.29 -0.55 -0.68 0.51 -0.43 -2.66 -2.14 -1.79 -0.96 -2.7 -0.36 -1.01 -0.03 1.08 -0.82 -0.89 -1.0 -1.47 0.76 -0.29
1.04 0.93 0.55 -0.09 0.34 0.45 -0.6 1.18 -0.56 1.15 -1.56 -1.29 0.21 1.61 0.35 0.77 -0.01 -0.06 -0.92 -0.25 -1.24 -0.69 -1.85 -0.46 -3.03 -0.19 -2.8 -1.36 0.12 -0.15 0.06 0.1 -1.05 -0.55 -4.12
-5.3 -5.21 -2.67 -5.36 1.0 1.65 -4.98 0.02 2.64 2.62 -3.94 -3.58 -5.82 -4.9 -4.76 3.11 -5.44 -0.91 -4.97 0.37 -1.11 -3.89 0.38 -5.25 -6.52 -8.08 -7.54 -4.26 1.71 -5.53 -6.8 -4.91 -3.93 -4.1 -4.53
1.91 1.26 1.71 0.42 -1.23 0.94 -0.25 1.52 -0.11 0.22 -1.88 -1.63 -1.31 -2.44 -0.11 -1.09 -0.11 0.23 0.18 -2.1 -1.89 -0.82 -2.65 -1.03 -3.05 -0.43 -0.94 0.31 -1.3 0.17 0.26 -0.13 -1.4 0.14 -0.26
-4.53 -3.75 -3.38 -3.73 0.48 0.62 -3.65 -0.69 0.89 0.78 -0.61 -0.93 0.23 -2.32 -4.89 3.7 -4.36 -0.32 -0.94 2.24 -3.78 -3.38 -1.6 -3.9 -5.95 -5.38 -5.76 -3.01 1.93 -2.51 -3.77 -2.94 -1.58 -1.18 -3.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.