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Heatmap: Cluster_241 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00001027.16 (tig00001027_g6387.t1)
 0.39 -0.18 -1.34 -0.41 -0.8 0.09 0.12 0.09 0.36 -0.08 0.5 0.05 0.35 -2.96 -1.98 -0.99 -0.44 -1.38 -0.48 0.22 0.0 1.08 1.37 0.84 -0.5 -0.26
Cpa|evm.model.tig00001027.17 (tig00001027_g6387.t1)
 0.56 -0.53 -1.04 -0.37 -0.42 -0.38 0.2 0.07 0.21 0.54 0.49 0.28 -0.12 -1.63 -1.09 -0.71 -0.72 -0.42 -0.35 0.56 -0.37 0.44 0.8 1.47 -1.45 -0.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.