Heatmap: Cluster_21 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
CCAC0055
CCAP34/8,15mM NO3
CCAP34/8,2mM NO3
JNU35
NIES-144,High light 12h
NIES-144,High light 24h
NIES-144,High light 48h
NIES-144,High light 6h
NIES-144,High light 72h
NIES-144,Homothallic
NIES-144,Low light 12h
NIES-144,Low light 24h
NIES-144,Low light 48h
NIES-144,Low light 6h
NIES-144,Low light 72h
Strain 121
Strain 712
Strain 712,25mg/L Jasmonic acid 1h
Strain 712,25mg/L Jasmonic acid 24h
Strain 712,25mg/L Jasmonic acid 6h
Strain 712,25mg/L Salicyclic acid 1h
Strain 712,25mg/L Salicyclic acid 24h
Strain 712,No jasmonic and salicyclic acid
Vegetative
ZY-18,Motile
ZY-18,Motile to non-motile
- - - 2.54 - - 0.25 - - 3.98 - - 0.34 - 0.22 - - - - - - - - -0.33 - -
0.08 - - 2.66 0.59 - - 0.79 0.51 3.02 - - -1.69 -0.18 - - -1.71 1.09 - - - 0.67 - -2.96 -1.03 -
1.64 - - 1.84 -2.53 -0.57 -0.46 - -2.61 2.46 -0.44 -0.99 0.75 -1.49 -0.6 0.64 1.21 0.28 - 0.05 - - - -0.87 -0.16 -0.82
1.7 -0.56 - 3.07 -0.78 0.22 1.15 -3.06 0.58 - -0.41 -0.94 -0.51 -1.32 0.51 -0.75 0.82 - - -1.34 - - -1.12 -4.72 -0.42 -1.62
-1.3 0.62 -1.77 2.78 -1.72 -1.93 -0.44 -1.92 -1.02 2.44 -2.43 -1.37 -1.11 -1.71 -1.13 0.05 0.02 - -1.17 1.25 0.76 - - -2.6 -0.44 -2.58
2.55 - -1.41 2.24 -0.71 -0.6 0.95 -1.14 0.66 -2.19 -0.51 -0.56 -0.74 -1.36 0.51 -1.11 2.16 -3.05 - -1.7 - - - -3.49 -2.0 -3.57
1.27 -0.24 - 2.54 -1.81 -1.77 -0.11 -2.15 0.19 1.72 -1.41 -1.42 -0.83 -2.02 0.13 -1.76 -1.7 0.51 -2.37 -0.99 0.66 -0.97 0.36 -0.71 -0.02 -1.32
2.43 - - 3.93 - - -2.6 0.3 - - - -3.69 - - -0.15 - - - - - - - - 1.58 - -
2.37 - - 3.15 - -0.77 -0.61 - -0.82 - 0.24 - - - 1.18 - - - - 1.84 - - - 0.2 - 0.98
- 0.74 - 2.76 0.95 0.27 0.49 0.32 1.16 1.29 0.39 0.11 -0.0 -0.02 0.29 - - - - - - - - - -0.55 -0.29
1.83 - - 3.52 -2.41 - -1.0 - 0.91 -0.73 - - - - -1.9 - - 0.41 -0.0 - 0.88 0.08 - - 0.88 -1.1
2.39 -0.7 - 3.4 - - -2.8 - -0.02 - - - - - -2.83 1.43 1.0 - - - - 0.73 - - 0.54 -1.03
2.14 - - 3.76 -3.99 -3.96 0.73 -3.15 -0.23 - - -4.0 -2.2 -4.14 0.2 -0.78 - -0.14 -0.56 -1.38 - -0.48 - -4.48 -1.26 -3.23
0.72 -2.58 - 2.08 -1.05 -0.85 -0.26 -0.19 -0.12 3.05 -0.43 -0.84 -0.71 0.2 -0.9 -0.45 - 0.19 - -1.05 - - -0.82 -1.69 -0.34 -1.33
2.62 - - 3.48 -0.81 -1.83 0.75 - -0.87 - -1.81 - -1.75 -1.97 0.94 - 0.95 - - - - - - - - -0.07
1.02 -3.24 - 2.02 -1.42 -0.94 -0.06 -2.17 0.13 1.71 -1.05 -1.11 -0.09 -2.94 0.45 0.45 0.48 -0.1 -0.73 -2.14 -0.12 0.08 -0.91 -1.22 0.68 -0.1
-0.51 -1.83 -1.57 1.94 0.05 0.0 -0.3 -0.6 -0.14 1.07 0.08 -0.31 -0.81 -0.79 -0.9 0.37 -0.45 0.08 -0.98 0.97 0.09 0.29 -0.07 -1.15 -0.69 -0.1
-0.75 0.24 - 2.44 0.59 0.09 0.46 -0.43 0.52 2.05 -0.01 -0.66 -0.66 -0.89 -0.39 - -0.47 -1.39 - - - - -0.4 - 0.88 0.31
1.28 -0.02 - 2.61 - - -0.05 -2.44 -0.18 2.4 - -2.32 -2.22 -2.46 -0.19 - - 1.13 - - - - 0.53 0.44 0.59 0.25
- 0.01 - 2.04 1.1 0.84 0.86 0.5 1.15 0.73 0.89 0.43 1.05 -0.32 0.57 - - - - - - - - -1.19 0.17 -0.49
2.55 -1.07 1.07 3.24 -2.98 -2.49 0.7 -3.19 0.51 -0.98 -3.38 -2.48 -0.75 -3.09 0.48 -5.23 - -1.85 - -4.86 -2.52 -3.73 -2.46 -2.64 -1.01 -1.7
2.65 - - 4.3 - - - - - - - - - - - - - - - - - - - - - -
2.67 - 2.05 3.5 -7.74 -5.16 -2.24 -5.1 -0.12 -0.81 -6.09 -6.75 -5.54 -5.5 -0.09 -0.67 -1.64 - -2.75 -4.15 - - -3.93 -6.25 -2.75 -3.66
0.7 - - 2.73 0.04 0.66 0.24 0.13 0.66 - 0.61 -0.56 -0.65 0.06 0.12 - -0.38 0.7 -0.72 - - - 0.27 -0.38 -0.84 -0.4
2.84 - - 3.17 - - -1.91 - - 0.82 - -1.9 -0.72 - -0.95 - - - 1.54 - - 1.62 - - -1.16 -
1.7 - - 3.2 0.55 -1.15 0.25 -2.22 0.16 - -2.14 -0.83 -1.98 -2.16 -3.21 0.05 - 0.7 - - 2.16 - - -1.29 -2.42 -
2.39 -1.65 - 2.97 0.36 0.24 -0.24 -1.64 0.44 -0.31 -0.41 -1.71 -1.64 -2.1 -0.39 0.78 0.85 - - -2.4 - - - - -1.82 -1.18
2.51 - - 3.14 - - - - - 0.25 - - - - -2.51 - - - - 2.15 1.85 1.05 - - - -
1.88 -3.62 -0.01 2.57 0.21 -0.4 -0.13 -1.22 -0.27 0.21 -0.1 -0.52 -0.07 -0.61 0.42 0.37 - - - - - - - -2.92 1.26 0.76
1.55 - - 3.89 -4.72 -3.74 - - -2.74 - -4.73 -4.75 -3.02 - -3.77 0.92 -1.55 0.69 -0.58 -0.69 0.37 -0.66 - -1.05 - -2.41
1.72 -1.86 - 2.81 -1.46 -1.62 -2.08 -1.34 -0.66 1.67 -1.71 -1.46 -1.82 -2.03 0.47 -0.15 0.42 - - 0.84 - 0.16 -1.1 0.49 -1.2 -1.88
0.15 -0.94 -1.39 0.83 -0.19 -0.41 -0.5 -0.36 -0.57 1.59 -0.15 -0.2 -0.21 -0.16 -0.33 -0.11 -0.38 0.46 0.25 0.1 0.29 -0.55 0.36 0.06 -0.39 -0.37
2.24 - -0.03 3.36 -3.77 -1.19 0.78 -4.83 0.71 - -1.66 -3.81 -2.71 -4.94 1.38 - - -1.94 -1.35 -2.17 -1.48 0.31 -1.95 -3.78 -2.9 -
- - - 3.2 0.98 1.16 -0.76 -0.35 1.1 2.44 0.78 -1.81 - -2.01 -1.92 - - - - - - - - -2.34 -1.12 -1.11
2.18 -1.65 - 1.54 -0.43 -0.9 -0.64 -0.85 0.12 0.68 -1.22 -1.35 -1.04 -1.53 -0.41 -1.41 -0.84 1.04 0.41 0.0 0.29 -0.1 0.55 -0.18 -0.7 -2.06
2.23 - -4.64 2.85 -1.22 -0.98 1.02 -1.56 1.3 -1.99 -1.99 -1.41 -1.17 -1.85 0.76 0.34 -2.74 -1.51 -1.51 - - -0.19 -3.1 -6.71 0.46 -1.13
1.57 -4.09 - 2.58 -3.98 -2.93 -1.16 -4.12 -0.14 1.96 -2.23 -1.81 -1.06 -2.28 0.9 -0.35 0.63 0.67 -0.86 -2.04 0.55 -0.95 -0.52 -1.23 -1.49 -1.81
2.74 - -6.28 3.38 -5.44 -5.19 -0.15 -5.86 0.65 -5.75 -6.83 -4.53 -3.76 -6.67 0.9 -4.1 -2.78 -3.03 0.54 -1.61 -3.36 0.22 -2.64 -3.58 -1.01 -2.2
0.78 - - 3.36 -3.7 -3.57 -2.08 -3.34 -0.79 - -2.27 -2.86 -3.44 -3.86 0.71 1.08 -1.94 -4.19 -2.6 -1.1 -1.4 2.15 -2.61 -4.74 1.2 -1.15
0.78 - - 3.36 -3.7 -3.57 -2.08 -3.34 -0.79 - -2.27 -2.86 -3.44 -3.86 0.71 1.08 -1.94 -4.19 -2.6 -1.1 -1.4 2.15 -2.61 -4.74 1.2 -1.15
- - - 3.59 -0.81 -1.81 0.8 0.05 -0.28 2.48 -0.69 -0.8 0.94 - -0.26 - - - - - - - - - - -
1.41 -3.64 0.91 2.04 -2.97 -0.58 0.05 -2.89 0.35 0.05 -1.52 -0.78 -0.44 -1.48 -0.3 0.22 0.53 0.28 -1.13 -0.78 0.33 -0.47 -0.15 -0.99 0.07 -0.23
- - - 2.83 0.67 0.42 0.55 -0.59 1.19 1.84 0.48 0.14 0.33 -0.38 0.09 - - - - - - - - - 0.65 -0.33
2.06 - - 3.71 -2.2 -2.2 0.29 -1.71 0.44 - -1.54 -0.86 -1.55 -1.48 1.13 - - - - - - - - -3.97 0.33 -1.46
-0.72 -0.43 - 3.65 -0.65 - -1.89 -0.09 - 2.3 -2.93 - -1.92 -2.14 0.28 - 0.78 - - - - - 0.5 -2.68 -2.26 -
1.2 - - 3.78 -3.69 -3.71 - -4.04 -2.19 -0.77 -6.38 - -27.89 -3.2 -1.95 - - - 0.49 0.18 -1.33 2.46 -2.64 -6.42 - -
2.74 - - 4.27 - - - - - - - - - - - - - - - - - - - - - -
1.3 - - 3.25 -0.94 -0.73 0.95 -3.59 -0.01 -0.85 0.15 -2.56 -1.37 0.13 -0.61 - - -0.71 1.46 - -0.24 - - -3.18 -1.82 0.37
1.42 -1.91 -1.27 2.61 -1.83 -1.2 -1.04 -1.71 0.12 2.48 -1.53 -1.5 -1.92 -1.81 -0.3 -0.69 -0.97 -1.43 -1.11 -0.93 -0.9 -1.02 -1.42 -1.19 0.1 -0.13
-1.39 -0.63 - 2.28 0.09 0.19 0.07 -0.08 0.24 1.93 -0.12 -0.25 -0.72 -0.08 -1.13 -2.15 0.24 -0.37 - -1.34 -0.2 -1.12 0.47 -1.35 -0.82 -0.13
2.5 -3.77 - 2.65 -1.51 -2.08 -0.33 -2.56 0.0 0.44 -1.2 -1.97 -2.06 -2.23 0.33 0.26 0.51 -0.54 -1.83 -1.65 -0.53 0.37 -0.01 -1.65 -1.42 -3.29
3.53 - - 2.5 - - - - - - - - - - - - 3.14 - - - - - - - - -
2.39 -5.01 -2.1 2.6 -4.42 -5.02 -0.96 -3.91 -1.03 -3.68 -2.77 -2.55 -2.31 -3.11 0.77 -2.2 -3.57 0.89 -1.08 -0.08 0.6 0.68 0.17 -1.15 0.87 -0.4
0.23 -0.47 - 2.17 -3.39 -3.37 -0.27 - -1.87 3.09 -3.42 -3.08 -1.57 -1.75 -1.59 0.78 -0.58 -0.5 - 0.82 - - 0.41 0.13 -0.65 -0.53
0.79 - - 3.12 -1.87 -0.46 -0.86 -2.58 -0.2 1.23 -3.47 -1.13 -0.72 -1.94 -2.52 -0.27 - 0.96 0.96 -0.86 - - 0.95 -1.63 -0.16 -0.73
- - - 3.35 - - - - - 3.98 - - - - - - - - - - - - - - - -
- - - 3.88 - - - - - 3.46 - - - - - - - - - - - - - -2.14 - -
1.21 -0.07 1.31 3.41 -1.28 -2.09 -2.3 -1.19 -1.64 -0.47 -1.9 -2.91 -2.29 -1.88 -1.04 -0.65 -0.82 -0.25 -2.16 -0.76 -0.06 -2.08 -0.34 -0.2 -3.45 -2.62
2.44 - - 2.48 -1.86 -1.55 1.16 -1.93 0.47 -1.17 -2.87 -2.27 -0.98 -1.91 1.11 -0.67 -0.1 - -0.44 - - 1.22 -1.04 -3.65 -0.56 -0.12
2.16 -2.67 - 2.76 -1.25 -2.02 1.03 - -0.45 - -2.59 -2.0 -3.49 -1.64 0.81 0.61 - 0.25 -0.16 0.02 -0.28 - -0.76 -1.48 0.46 -0.26
3.41 - - 3.6 - - - - - 1.39 - - - - - - - - - - - - - - -0.59 -
- - - 2.69 - - - - - 3.8 - - - - 1.06 - - - - - - - - - - 1.85
1.02 0.68 - 3.15 - -0.66 0.39 -2.41 0.7 - -1.02 -0.66 - -0.62 -2.28 - - 0.6 1.18 - - 1.26 - -2.74 0.07 -1.51
1.97 -3.77 - 2.33 -1.03 -1.15 -1.26 -2.38 -0.09 -0.56 -0.75 -1.83 -1.0 -2.49 -0.9 -0.06 1.51 -2.0 -0.42 -2.24 0.05 0.25 0.31 0.02 0.05 0.22
2.04 - - 2.18 0.84 0.13 0.37 -0.65 0.84 -0.16 0.14 0.14 -1.08 0.35 0.36 - - -1.02 - -1.25 - 1.23 - - 0.32 -3.13
-0.69 - - 3.49 - -4.14 0.96 - 0.68 -2.42 - -5.15 -3.95 - -0.59 -0.92 - - 2.11 -2.52 - 2.08 -2.29 -3.18 - -4.39
1.87 - - 4.01 - - - - - 2.31 - - - - - - - - - - - - - - - 0.34
2.03 - - 3.05 -3.2 -3.21 1.04 -1.01 0.87 -0.25 -1.86 -2.73 -1.02 -1.36 1.74 -1.34 -1.77 - - -0.93 - 0.29 - -3.81 -0.91 -0.99
2.44 - - 2.67 -0.91 0.76 -0.45 -1.03 -0.29 -0.54 1.14 0.06 -0.58 0.17 0.6 - - - - - - - - -1.93 -0.2 0.67
1.02 0.68 - 3.15 - -0.66 0.39 -2.41 0.7 - -1.02 -0.66 - -0.62 -2.28 - - 0.6 1.18 - - 1.26 - -2.74 0.07 -1.51
1.44 -0.75 - -0.0 -2.99 -0.42 0.14 -1.88 -0.4 2.2 -2.01 -1.11 1.07 -4.45 -0.19 0.61 0.18 0.83 - -1.98 0.3 1.5 -1.76 -1.74 -1.06 -0.85
2.47 - - 4.0 - - -0.9 - -1.76 - - - -3.19 - 0.9 - - - - -0.68 - - - - -0.25 -2.54
- - - 3.55 -0.03 -1.06 -1.04 -1.09 0.49 2.66 - - -0.94 -1.05 0.48 - - - - - - - - -0.08 -0.32 -
1.47 -0.93 -0.38 3.42 -2.22 -5.95 1.14 -2.35 0.78 -0.47 -2.91 -2.61 -0.64 -3.65 1.64 -2.17 -4.18 - -3.52 - -2.06 - -4.12 - -0.44 -0.71
-1.88 -7.47 -8.54 3.48 -3.4 -3.62 -2.78 -2.69 -2.32 2.68 -3.43 -3.09 -2.54 -3.03 -2.03 0.1 -0.55 -1.6 -1.92 -0.7 -1.46 -0.62 -1.51 -1.0 -0.05 -0.08
- - - 3.69 - - - - 1.05 2.8 0.1 - 0.2 - - - - - - - - - - -5.72 - 0.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.