Heatmap: Cluster_51 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
CCAC0055
CCAP34/8,15mM NO3
CCAP34/8,2mM NO3
JNU35
NIES-144,High light 12h
NIES-144,High light 24h
NIES-144,High light 48h
NIES-144,High light 6h
NIES-144,High light 72h
NIES-144,Homothallic
NIES-144,Low light 12h
NIES-144,Low light 24h
NIES-144,Low light 48h
NIES-144,Low light 6h
NIES-144,Low light 72h
Strain 121
Strain 712
Strain 712,25mg/L Jasmonic acid 1h
Strain 712,25mg/L Jasmonic acid 24h
Strain 712,25mg/L Jasmonic acid 6h
Strain 712,25mg/L Salicyclic acid 1h
Strain 712,25mg/L Salicyclic acid 24h
Strain 712,No jasmonic and salicyclic acid
Vegetative
ZY-18,Motile
ZY-18,Motile to non-motile
- -0.66 - 1.56 0.2 -0.68 -1.3 -0.89 -2.09 -0.33 -0.65 -1.55 -0.35 -1.37 -2.11 1.58 0.89 0.22 - 0.99 -0.31 1.76 0.21 0.81 -0.57 -0.88
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - - - - - - - - - - - - - - - - -2.38 3.36 - - - 3.96 - -
1.55 - - - - - - - - - - - - - 0.21 - 3.06 3.13 - - - - - 2.27 - -
-1.17 -0.19 - -1.48 -0.39 -0.56 -0.04 -0.5 -1.52 0.63 -0.08 -0.58 -0.77 -0.79 -0.39 0.24 1.47 0.51 0.77 -1.0 -1.35 -0.15 2.02 0.75 -0.12 -2.32
1.66 - - - - -0.78 -0.78 0.65 - - - - - - - - 3.94 - - - - - - 2.24 - -
- - - - - - 2.94 - - - - - - - - - - - - - - - - 2.44 - 3.69
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - -0.69 -0.27 -0.28 -2.09 -1.32 -2.33 0.42 0.97 -0.71 -1.22 0.55 -0.34 - 1.49 0.56 - 1.33 1.03 - 0.55 2.1 0.03 -0.54
- - - - -0.21 - 2.27 1.26 0.75 - - -0.23 0.86 0.79 1.32 - - - - - - - - 2.98 0.52 -
0.84 -1.11 0.31 -1.34 -0.29 0.01 -0.61 -0.73 -0.45 -0.23 -0.22 -0.26 -1.11 -0.74 -1.16 0.82 -0.54 0.86 -1.62 -0.56 0.48 -2.12 0.11 1.66 0.36 0.88
- - - - - - - - - - 1.99 - - 2.68 - - - - - - - - - 3.97 - -
0.47 - - 0.69 - - 0.34 -1.59 0.27 0.22 - -2.51 -2.23 -1.06 -0.22 - 1.87 - 2.53 - - - 2.35 1.49 - -
- - - - 1.87 - 1.86 - 1.8 - - - 1.95 - 0.79 - - - - - - - - 1.85 1.58 1.61
- - - - - - -0.06 0.83 - 1.64 -1.06 - 0.61 - 0.86 - - - - - - - - 3.07 2.25 1.67
0.65 - - - -0.34 0.25 -1.38 - -0.4 - - - - -0.35 -0.42 - 1.42 - 3.07 - 1.95 - 1.48 1.02 - -
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - 1.82 -1.78 -0.77 -2.8 0.28 -1.83 1.51 -1.19 -1.8 -0.71 -0.74 -0.23 0.43 2.58 0.07 - -0.17 - - 1.06 0.82 -0.46 -1.03
- - - - - - - - - - - - - - - - - - - - - - - 3.77 3.62 -
- - - - - 0.59 1.31 1.8 1.54 - 1.18 1.16 -0.34 1.7 1.11 - - - - - - - - 1.88 - 0.33
- - - - - - - - - - - - - - 3.03 - - - - - - - - 4.16 - -
- - - - 0.34 0.34 1.02 - 1.27 - 0.55 1.9 - 0.32 -0.75 - - - - - - - - 3.15 1.05 0.07
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - 3.3 - - - - - - 1.94 - - - - - - - - - - - - 3.62 - -
-0.68 -0.57 - 1.91 -0.71 - -1.51 -0.33 -0.06 1.21 -0.65 -0.94 -2.39 -0.49 - 1.71 - - 1.45 1.52 0.82 - - 1.35 -0.59 -
- - - 2.92 1.02 -0.41 -0.91 1.06 -0.46 - -0.32 -0.01 -0.81 -1.15 -2.05 - - - - - - - - 3.14 - -1.26
- - - - - - - - - - - - - - - - - - - - - - - 3.5 - 3.88
-0.19 -1.7 0.19 -2.01 -1.08 -1.47 -0.95 -1.93 -1.16 1.16 -1.73 -1.46 -1.84 -2.81 -1.18 2.19 0.49 -0.72 -1.17 0.9 -1.97 1.4 -1.45 1.86 0.25 -0.7
- - - 1.89 - - - - - - - - - -0.76 0.14 - - - - - - - 3.22 3.49 -10.14 -
- - - - - 1.58 2.64 1.51 - - - - - - 2.5 - - - - - - - - 3.04 - -
-1.0 -4.51 - 0.4 -0.19 0.25 -0.11 -0.03 0.22 -0.88 0.23 -0.26 -0.57 -0.09 0.06 -0.8 0.77 0.96 -1.16 -0.65 0.72 -0.08 0.42 1.35 0.27 -0.32
1.06 - - 2.39 -0.19 - - - 1.34 2.5 - - - - - - 2.57 - - - - - - 1.87 - -
- - - - -1.13 - 0.04 -0.25 - - 0.44 - -1.05 -1.16 1.13 - - - - 1.46 - - 2.69 3.32 - -
- 0.84 - -0.07 -0.07 -1.68 -0.02 0.24 -0.71 - 0.4 1.16 -1.41 0.91 1.08 - 1.1 - - - 1.64 - - 1.77 1.38 -
- - - - 1.22 - - 0.04 0.16 - 0.22 - - - - - - - 3.89 - - - - 2.47 - -
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
0.52 -2.32 - - -1.24 -0.24 0.38 -2.75 -0.06 -0.54 -1.66 0.76 -1.65 0.25 0.75 0.95 1.11 - 0.18 - 0.06 0.26 1.91 1.12 0.07 -1.49
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - - - - - - 3.25 - - - - - 3.24 - - - - - - - - 2.81 - -
- - - 2.86 0.87 - 0.99 -0.32 - - 1.28 - - - -0.57 2.6 - - - - -22.9 - - 1.63 - 0.92
0.01 0.48 - -0.45 -0.37 -0.3 0.27 -0.73 -0.51 0.4 -0.73 -1.32 -0.76 -0.86 -0.59 1.38 0.73 -0.78 0.39 -0.02 0.27 0.88 1.53 0.66 - -
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
- - - 1.85 - - - -1.35 - - 0.05 - - -1.16 - - - - 3.0 - - - 2.83 2.23 -0.44 -
-2.84 -3.18 - 1.08 0.43 0.86 0.03 0.38 0.55 -1.4 0.39 0.29 -0.05 0.28 0.54 - - 0.33 1.33 -0.49 -0.79 - -1.27 1.69 -0.21 -0.77
- - - - 0.86 - - 0.75 0.8 - - - - 0.7 0.78 - 3.63 - - - - - - 2.34 - -
- - - 0.61 0.84 0.6 1.4 0.52 1.43 - -1.97 -0.37 0.15 0.28 0.95 - - - - - - - - 2.72 -1.25 1.08
- - - - - - 3.68 - - - - - 2.26 - - - - - - - - - - 3.07 - -
- - - - - 3.0 2.99 - - - - - - - - - - - - - - - - 3.33 - -
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -3.9
- - - - - - - - - - - - - - - - - - - - - - - 4.7 - -
-2.28 - - -3.77 -1.07 -0.98 -0.41 -0.73 0.4 0.67 -1.16 0.16 0.51 -1.54 0.87 -0.5 -2.13 -7.27 0.63 2.07 -6.8 2.17 -6.28 1.64 -1.04 -0.91
- - - - - - - - - - - - - - - - 4.31 - - - - - - 2.63 - -
- - - - 0.19 -0.4 1.58 1.63 2.0 - 0.91 0.9 1.33 -1.57 0.84 - - - - - - - - 1.33 0.31 0.92

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.