Heatmap: Cluster_300 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00001025.12 (tig00001025_g6368.t1)
0.14 1.64 - - -1.44 - -0.94 -0.08 -1.1 - 0.41 -0.04 0.91 -0.14 0.73 - - -0.71 -0.35 -1.23 -0.54 -0.93 2.95 0.97 - -
Cpa|evm.model.tig00001027.9 (tig00001027_g6380.t1)
0.08 0.46 -0.51 -1.76 -3.52 -3.41 -3.21 -1.43 0.33 -0.17 0.34 -1.74 - -4.01 0.76 -0.68 -0.29 -0.39 -0.91 0.36 0.35 1.36 2.71 0.28 -2.51 -0.68

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.