Heatmap: Cluster_12 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	CCAC0055	CCAP34/8,15mM NO3	CCAP34/8,2mM NO3	JNU35	NIES-144,High light 12h	NIES-144,High light 24h	NIES-144,High light 48h	NIES-144,High light 6h	NIES-144,High light 72h	NIES-144,Homothallic	NIES-144,Low light 12h	NIES-144,Low light 24h	NIES-144,Low light 48h	NIES-144,Low light 6h	NIES-144,Low light 72h	Strain 121	Strain 712	Strain 712,25mg/L Jasmonic acid 1h	Strain 712,25mg/L Jasmonic acid 24h	Strain 712,25mg/L Jasmonic acid 6h	Strain 712,25mg/L Salicyclic acid 1h	Strain 712,25mg/L Salicyclic acid 24h	Strain 712,No jasmonic and salicyclic acid	Vegetative	ZY-18,Motile	ZY-18,Motile to non-motile
lcl\|BLLF01000004.1_cds_GFH05637.1_114 (GFH05637)	0.0	1.81	0.0	0.0	2.03	1.65	1.37	0.9	0.66	4.11	1.88	2.55	2.49	1.58	0.52	6.49	10.51	4.44	0.0	0.0	3.24	0.96	1.16	0.19	1.48	0.77
lcl\|BLLF01000020.1_cds_GFH06060.1_537 (GFH06060)	0.0	0.36	0.0	0.27	0.28	0.54	0.27	0.08	0.22	0.43	0.23	0.14	0.51	0.28	0.09	0.5	0.93	2.35	0.0	0.0	0.0	1.43	0.97	0.47	0.23	0.46
lcl\|BLLF01000024.1_cds_GFH06149.1_626 (GFH06149)	8.89	0.0	0.0	0.0	7.98	9.82	5.23	3.48	3.06	6.18	7.03	5.38	4.49	2.25	2.13	14.55	2.16	25.0	0.0	9.66	12.55	3.6	15.79	5.81	10.48	7.43
lcl\|BLLF01000054.1_cds_GFH06749.1_1226 (GFH06749)	0.39	1.03	0.0	0.74	0.58	0.9	1.0	0.77	0.95	2.13	0.75	0.57	0.65	0.66	0.47	1.5	3.91	5.87	0.88	0.5	0.81	0.93	2.33	1.03	0.81	0.41
lcl\|BLLF01000068.1_cds_GFH06997.1_1474 (GFH06997)	4.52	0.39	0.0	3.32	0.37	0.18	0.0	0.66	0.0	5.01	0.0	0.55	0.0	0.18	0.0	7.29	8.55	10.71	0.0	1.15	2.23	4.31	0.0	0.91	0.0	0.92
lcl\|BLLF01000094.1_cds_GFH07430.1_1907 (GFH07430)	1.87	0.0	0.0	1.08	1.9	1.76	0.82	0.63	1.49	1.74	1.2	1.17	1.03	0.67	1.0	1.07	1.55	6.77	0.9	0.61	2.73	0.0	2.38	0.49	0.48	1.96
lcl\|BLLF01000094.1_cds_GFH07443.1_1920 (GFH07443)	2.32	0.0	0.0	2.11	0.0	0.0	0.04	0.0	0.0	6.91	0.43	0.0	0.92	0.0	0.88	0.0	0.0	12.74	0.0	0.0	0.0	0.0	0.0	0.42	1.85	1.18
lcl\|BLLF01000101.1_cds_GFH07533.1_2010 (GFH07533)	5.55	0.0	0.0	2.61	0.0	6.1	1.96	0.0	0.0	5.62	0.0	4.3	2.75	1.82	0.0	0.0	0.0	18.61	0.0	21.09	0.0	0.0	0.0	0.0	2.86	2.91
lcl\|BLLF01000144.1_cds_GFH08186.1_2663 (GFH08186)	71.3	0.0	0.0	19.17	35.21	25.44	54.81	32.32	38.86	27.55	25.65	42.21	42.06	40.19	38.95	9.73	36.12	75.99	0.0	12.92	20.98	12.04	37.72	65.22	33.28	51.36
lcl\|BLLF01000180.1_cds_GFH08725.1_3202 (GFH08725)	0.0	0.0	0.0	0.0	0.0	1.79	0.0	0.0	0.0	0.0	0.71	0.0	0.0	1.14	0.0	0.0	0.0	8.68	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
lcl\|BLLF01000218.1_cds_GFH09225.1_3702 (GFH09225)	0.87	2.94	0.0	0.0	1.44	2.87	1.28	2.38	1.38	1.86	0.86	3.72	1.55	2.31	0.82	7.87	1.95	9.83	1.59	0.0	2.83	0.0	8.13	0.19	2.1	1.91
lcl\|BLLF01000330.1_cds_GFH10614.1_5091 (GFH10614)	0.0	0.0	0.0	4.09	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	9.25	9.73	0.0	0.0	0.0	0.0	9.66	0.8	0.0	0.0
lcl\|BLLF01000410.1_cds_GFH11509.1_5986 (GFH11509)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.38	0.0	1.44	0.0	0.0	0.0	0.0	0.0	0.0	20.62	0.0	0.0	0.0	0.0	10.23	4.47	0.0	0.0
lcl\|BLLF01000459.1_cds_GFH12014.1_6491 (GFH12014)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.55	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
lcl\|BLLF01000462.1_cds_GFH12041.1_6518 (GFH12041)	4.58	0.0	0.0	0.0	2.74	1.62	3.39	0.24	1.31	1.77	2.5	2.18	2.36	2.8	3.14	0.0	0.0	11.16	0.0	0.0	5.38	0.0	7.74	5.19	2.7	1.82
lcl\|BLLF01000481.1_cds_GFH12242.1_6719 (GFH12242)	0.0	1.0	0.0	1.58	0.0	0.54	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.43	0.0	0.0	0.0	0.0	0.0	0.3	0.87	0.0
lcl\|BLLF01000560.1_cds_GFH12973.1_7450 (GFH12973)	0.99	0.58	0.0	0.46	1.55	1.21	2.1	0.42	1.19	2.99	1.67	1.09	0.99	0.93	0.74	4.23	5.23	12.1	0.0	2.81	3.04	6.97	3.28	1.79	0.76	0.26
lcl\|BLLF01000560.1_cds_GFH12977.1_7454 (GFH12977)	0.0	0.0	0.0	2.87	0.32	0.63	0.36	0.0	0.31	0.0	0.69	0.63	0.0	0.0	0.61	2.91	0.0	6.82	0.0	0.0	3.14	0.0	0.0	0.97	0.0	0.0
lcl\|BLLF01000730.1_cds_GFH14471.1_8948 (GFH14471)	0.55	0.69	0.0	1.22	1.2	0.87	1.07	0.91	0.94	2.7	0.81	0.73	0.42	1.07	0.59	2.11	4.17	2.68	1.18	0.48	0.79	1.34	2.14	1.14	1.27	0.73
lcl\|BLLF01000835.1_cds_GFH15317.1_9794 (GFH15317)	7.78	0.0	0.0	0.0	3.22	1.54	2.48	1.24	0.99	6.28	3.16	0.52	0.98	1.26	1.07	2.8	5.19	20.64	1.25	1.33	7.35	2.71	6.16	0.45	0.55	1.89
lcl\|BLLF01000864.1_cds_GFH15531.1_10008 (GFH15531)	1.43	0.0	0.0	13.15	6.19	5.32	6.22	2.83	5.31	15.38	8.17	3.72	5.5	3.01	0.85	3.58	18.56	22.15	4.18	2.41	9.77	0.0	3.01	4.65	4.02	3.63
lcl\|BLLF01000901.1_cds_GFH15794.1_10271 (GFH15794)	5.61	1.84	0.0	3.43	3.82	8.56	3.74	2.62	4.94	11.09	4.05	5.69	3.74	6.0	1.82	12.19	5.17	27.2	4.08	3.47	11.26	0.0	14.85	6.0	7.52	9.21
lcl\|BLLF01000958.1_cds_GFH16184.1_10661 (GFH16184)	0.0	0.0	0.0	0.0	14.2	17.97	5.25	8.22	6.17	16.63	28.62	16.67	7.12	8.54	2.46	0.0	26.17	55.05	41.29	7.8	37.99	0.0	54.65	0.0	4.23	19.36
lcl\|BLLF01000968.1_cds_GFH16252.1_10729 (GFH16252)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.88	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	7.11	0.0	0.0	0.0	0.0	0.0	1.22	0.0	0.0
lcl\|BLLF01001006.1_cds_GFH16504.1_10981 (GFH16504)	0.0	0.0	0.0	4.75	4.77	1.57	9.16	7.3	4.06	6.83	5.7	2.66	2.21	6.78	1.52	14.47	42.97	18.83	5.65	9.6	10.4	5.97	0.0	0.61	0.0	0.0
lcl\|BLLF01001132.1_cds_GFH17335.1_11812 (GFH17335)	2.38	0.0	0.0	0.0	0.0	0.0	3.23	0.0	2.87	12.89	0.0	1.02	3.4	0.89	2.84	0.0	6.76	28.45	0.0	6.05	0.0	0.0	0.0	5.35	0.0	0.0
lcl\|BLLF01001147.1_cds_GFH17431.1_11908 (GFH17431)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	6.68	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
lcl\|BLLF01001169.1_cds_GFH17570.1_12047 (GFH17570)	0.0	0.0	0.0	0.0	0.79	0.43	0.5	0.22	0.48	1.2	1.05	0.55	0.13	0.42	0.47	0.82	1.23	3.57	0.66	0.8	0.76	0.7	1.45	0.27	0.42	0.73
lcl\|BLLF01001335.1_cds_GFH18664.1_13141 (GFH18664)	1.03	0.0	0.0	0.54	0.74	0.21	1.16	0.66	1.48	3.71	1.08	0.18	0.41	0.52	0.8	3.34	0.0	5.35	0.0	1.16	1.88	0.0	1.44	3.33	0.9	0.3
lcl\|BLLF01001552.1_cds_GFH19981.1_14458 (GFH19981)	0.0	0.0	0.0	10.89	1.61	4.81	0.85	1.85	1.16	2.61	4.15	1.98	4.46	4.4	0.78	7.37	0.0	17.27	4.32	2.45	7.94	4.56	5.71	1.9	0.0	2.03
lcl\|BLLF01001608.1_cds_GFH20281.1_14758 (GFH20281)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.73	0.0	0.0	0.0	0.0	0.0	0.0	1.15	1.69	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
lcl\|BLLF01001621.1_cds_GFH20367.1_14844 (GFH20367)	2.41	4.12	0.0	3.94	2.85	3.74	2.5	2.02	1.85	5.93	3.21	3.86	2.67	3.01	0.97	8.23	8.94	27.48	2.94	3.34	10.19	11.4	8.44	3.66	2.76	1.68
lcl\|BLLF01001708.1_cds_GFH20841.1_15318 (GFH20841)	0.0	0.0	0.0	0.55	1.11	0.73	0.4	0.5	0.89	3.58	0.73	0.74	0.6	1.0	0.53	0.0	0.0	7.89	3.95	1.12	3.63	0.0	6.53	2.02	0.91	0.92
lcl\|BLLF01001896.1_cds_GFH21738.1_16215 (GFH21738)	0.0	0.0	0.0	0.0	0.0	0.14	0.0	0.0	0.14	0.0	0.0	0.0	0.17	0.0	0.0	1.34	0.99	5.22	0.0	0.0	0.0	0.0	2.07	0.25	0.0	0.24
lcl\|BLLF01001929.1_cds_GFH21911.1_16388 (GFH21911)	1.37	0.0	0.0	0.0	0.57	0.29	0.93	0.0	0.83	1.86	0.62	0.0	0.34	0.0	0.0	0.0	1.95	6.14	0.0	1.74	2.83	0.0	0.0	0.59	0.47	0.96
lcl\|BLLF01002119.1_cds_GFH22765.1_17242 (GFH22765)	2.3	0.0	0.0	0.0	0.11	0.0	2.17	0.1	0.0	4.95	0.29	0.65	0.24	4.52	0.0	2.79	23.32	19.92	0.0	5.24	3.08	0.0	5.75	2.87	3.16	1.8
lcl\|BLLF01002207.1_cds_GFH23173.1_17650 (GFH23173)	1.68	0.0	0.0	2.11	0.0	0.0	0.0	0.65	1.35	6.94	1.7	0.69	0.0	0.69	0.96	0.0	7.77	10.03	0.0	0.0	0.0	0.0	0.0	2.85	1.16	1.16
lcl\|BLLF01002553.1_cds_GFH24504.1_18981 (GFH24504)	0.4	0.0	0.0	0.0	0.0	0.0	0.19	0.11	0.94	10.03	0.69	0.28	1.57	0.24	1.74	4.42	10.18	18.37	0.0	0.0	0.0	6.74	6.21	0.27	0.0	0.0
lcl\|BLLF01002731.1_cds_GFH25140.1_19617 (GFH25140)	0.0	0.0	0.0	0.0	0.03	0.07	0.1	0.06	0.13	0.21	0.21	0.06	0.11	0.13	0.12	0.0	0.0	1.39	0.0	0.0	0.74	0.0	0.0	0.17	0.05	0.0
lcl\|BLLF01002969.1_cds_GFH25951.1_20428 (GFH25951)	0.37	0.22	0.0	0.7	1.12	0.53	0.53	0.93	0.62	2.36	0.48	0.52	0.46	0.41	0.61	1.94	5.19	3.06	0.0	0.4	1.15	0.8	0.44	0.03	0.68	0.39
lcl\|BLLF01003060.1_cds_GFH26218.1_20695 (GFH26218)	1.34	0.92	0.0	0.0	0.37	0.28	0.38	0.51	0.09	1.81	0.67	0.65	0.1	0.48	0.09	0.91	3.16	3.32	1.0	2.26	1.84	0.0	1.98	0.65	1.23	0.62
lcl\|BLLF01003265.1_cds_GFH26862.1_21339 (GFH26862)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.8	0.0	0.0	0.0	0.0	16.16	0.0	4.58	0.0	0.0	5.35	0.53	1.24	0.0
lcl\|BLLF01003297.1_cds_GFH26947.1_21424 (GFH26947)	0.0	0.0	0.0	0.0	0.0	0.29	0.0	0.0	0.0	0.0	0.0	0.29	0.34	0.0	0.0	0.0	0.0	7.81	0.0	0.0	0.0	0.0	0.0	0.5	0.0	0.0
lcl\|BLLF01003573.1_cds_GFH27679.1_22156 (GFH27679)	0.0	0.0	0.0	0.0	0.7	0.0	1.48	1.98	0.0	13.64	0.82	0.0	0.0	0.0	2.0	7.91	15.75	10.03	0.0	5.01	6.92	0.0	6.42	3.16	0.0	0.0
lcl\|BLLF01003973.1_cds_GFH28643.1_23120 (GFH28643)	5.77	0.0	0.0	0.0	0.0	2.43	0.0	8.94	5.8	15.65	1.21	1.18	1.26	7.52	2.34	11.06	16.41	34.52	0.0	0.0	11.91	0.0	36.9	11.15	0.0	2.0
lcl\|BLLF01004129.1_cds_GFH28985.1_23462 (GFH28985)	0.0	1.31	0.0	0.0	1.44	2.36	1.21	0.65	1.15	3.29	0.75	0.23	1.01	1.66	0.91	0.0	1.62	5.11	0.0	1.45	2.35	0.0	1.69	0.47	1.96	1.2
lcl\|BLLF01004193.1_cds_GFH29121.1_23598 (GFH29121)	44.86	29.37	5.12	25.44	31.79	33.15	27.47	14.01	31.16	39.72	33.99	27.45	29.88	19.49	22.02	18.71	28.57	102.66	37.57	19.86	75.45	4.63	39.78	9.17	12.12	13.35
lcl\|BLLF01004229.1_cds_GFH29193.1_23670 (GFH29193)	0.0	0.0	0.0	0.7	0.29	0.23	0.06	0.05	0.06	0.0	0.82	0.06	0.0	0.18	0.17	0.0	0.0	2.5	0.0	0.35	0.58	0.0	1.66	0.03	0.29	0.1
lcl\|BLLF01004242.1_cds_GFH29219.1_23696 (GFH29219)	0.0	0.0	0.0	3.63	0.0	1.63	0.39	0.0	0.77	5.22	0.8	0.4	0.0	0.36	0.38	0.0	2.74	5.76	0.0	0.0	0.0	0.0	0.0	1.75	0.66	1.34
lcl\|BLLF01004470.1_cds_GFH29681.1_24158 (GFH29681)	0.31	0.37	0.0	0.34	0.1	0.22	0.11	0.5	0.11	3.02	0.0	0.22	0.0	0.12	0.1	1.5	3.38	2.5	0.0	0.0	0.0	0.0	2.08	0.13	0.0	0.0
lcl\|BLLF01004659.1_cds_GFH30025.1_24502 (GFH30025)	1.32	0.0	0.0	0.55	2.41	0.73	0.6	2.17	0.71	4.77	1.35	2.04	0.99	1.22	2.47	1.68	1.25	11.84	0.0	3.35	1.82	2.08	2.61	5.56	2.12	0.61
lcl\|BLLF01005075.1_cds_GFH30696.1_25173 (GFH30696)	0.0	0.0	0.0	11.68	1.37	1.46	0.0	1.82	1.01	13.1	2.92	3.52	1.43	1.45	0.29	13.42	0.0	18.47	0.0	2.18	10.07	0.0	4.39	0.84	1.64	0.88
lcl\|BLLF01005291.1_cds_GFH31015.1_25492 (GFH31015)	0.0	0.0	0.0	1.14	0.0	0.76	0.0	0.35	0.36	0.0	0.0	1.15	0.0	0.75	0.0	3.46	0.0	5.41	0.0	0.0	0.0	0.0	5.37	0.88	0.0	0.0
lcl\|BLLF01005425.1_cds_GFH31186.1_25663 (GFH31186)	1.81	0.0	0.0	3.41	1.89	3.0	1.86	0.69	0.36	0.0	1.26	2.97	2.5	0.37	0.36	0.0	2.57	10.82	0.0	0.0	0.0	0.0	2.68	1.23	0.62	0.0
lcl\|BLLF01005778.1_cds_GFH31621.1_26098 (GFH31621)	10.84	0.0	0.0	1.7	6.84	10.76	9.29	5.76	7.07	21.99	6.68	2.81	7.97	9.01	5.97	5.18	15.37	40.42	6.07	3.44	22.32	6.4	8.03	3.51	7.45	3.76
lcl\|BLLF01006066.1_cds_GFH31918.1_26395 (GFH31918)	1.93	0.0	0.0	0.0	0.0	0.0	1.6	0.0	0.0	0.0	0.0	0.0	0.86	0.0	0.0	0.0	11.0	11.57	0.0	0.0	7.98	0.0	0.0	2.56	0.0	0.0
lcl\|BLLF01006135.1_cds_GFH31985.1_26462 (GFH31985)	0.0	0.0	0.0	0.0	1.28	0.0	0.0	1.24	2.47	8.32	2.57	1.32	5.75	5.39	0.0	0.0	0.0	9.17	0.0	0.0	0.0	0.0	0.0	0.58	0.0	0.0
lcl\|BLLF01006283.1_cds_GFH32124.1_26601 (GFH32124)	0.0	0.0	0.0	0.0	3.97	0.98	0.98	8.25	2.87	0.0	3.97	0.98	2.24	1.87	0.97	9.11	27.05	32.15	0.0	6.05	19.63	0.0	7.06	7.51	3.28	0.0
lcl\|BLLF01006303.1_cds_GFH32144.1_26621 (GFH32144)	0.0	0.0	0.0	1.48	0.99	1.48	0.56	1.35	2.83	6.37	3.43	2.46	2.06	2.6	0.95	9.0	3.34	24.59	5.27	0.0	4.85	5.57	17.44	4.33	2.43	1.64
lcl\|BLLF01006556.1_cds_GFH32355.1_26832 (GFH32355)	0.0	0.0	0.0	0.0	0.67	0.0	0.0	0.0	0.32	2.18	0.34	0.0	0.0	0.0	0.65	0.0	0.0	7.21	0.0	0.0	0.0	0.0	2.39	2.29	0.55	0.56
lcl\|BLLF01006560.1_cds_GFH32359.1_26836 (GFH32359)	0.0	0.0	0.0	0.0	0.0	2.08	0.0	0.65	0.0	0.0	0.0	0.0	0.0	0.0	0.67	0.0	0.0	5.01	0.0	4.26	0.0	0.0	0.0	0.41	1.16	1.18
lcl\|BLLF01006808.1_cds_GFH32565.1_27042 (GFH32565)	3.25	0.0	0.0	0.0	5.47	1.34	1.36	0.0	0.0	8.82	4.3	1.34	1.42	3.78	3.92	0.0	18.51	29.2	14.6	0.0	13.43	0.0	0.0	7.73	4.49	9.09
lcl\|BLLF01007022.1_cds_GFH32717.1_27194 (GFH32717)	1.35	1.73	0.0	0.78	0.0	2.01	0.0	0.51	0.0	0.0	0.84	2.46	0.0	1.96	0.0	0.0	1.12	8.17	0.0	0.0	0.0	0.98	0.0	0.02	0.0	0.0
lcl\|BLLF01007229.1_cds_GFH32840.1_27317 (GFH32840)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.18	0.0	0.34	0.0	0.0	0.32	0.0	0.0	4.8	0.0	0.0	0.0	0.0	2.39	0.33	0.0	0.0
lcl\|BLLF01007653.1_cds_GFH33052.1_27529 (GFH33052)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.07	0.09	0.0	0.0	0.0	0.49	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
lcl\|BLLF01007787.1_cds_GFH33111.1_27588 (GFH33111)	3.35	0.0	0.0	0.0	0.67	0.49	2.48	0.44	0.0	0.0	0.98	0.0	0.52	0.49	1.49	0.0	0.0	19.28	0.0	0.0	6.14	0.0	7.03	0.23	0.0	0.0
lcl\|BLLF01008108.1_cds_GFH33257.1_27734 (GFH33257)	13.41	0.0	0.0	6.32	10.59	5.57	5.04	14.99	15.52	40.91	8.05	10.49	15.81	18.54	12.1	32.11	4.77	25.07	15.04	4.26	6.92	15.89	4.98	31.79	6.93	11.69
lcl\|BLLF01008472.1_cds_GFH33395.1_27872 (GFH33395)	0.0	0.2	0.0	0.0	0.09	0.27	0.05	0.0	0.28	0.35	0.22	0.0	0.06	0.05	0.05	0.0	0.87	0.78	0.0	0.0	0.0	0.0	0.0	0.18	0.0	0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)