Heatmap: Cluster_88 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
CCAC0055
CCAP34/8,15mM NO3
CCAP34/8,2mM NO3
JNU35
NIES-144,High light 12h
NIES-144,High light 24h
NIES-144,High light 48h
NIES-144,High light 6h
NIES-144,High light 72h
NIES-144,Homothallic
NIES-144,Low light 12h
NIES-144,Low light 24h
NIES-144,Low light 48h
NIES-144,Low light 6h
NIES-144,Low light 72h
Strain 121
Strain 712
Strain 712,25mg/L Jasmonic acid 1h
Strain 712,25mg/L Jasmonic acid 24h
Strain 712,25mg/L Jasmonic acid 6h
Strain 712,25mg/L Salicyclic acid 1h
Strain 712,25mg/L Salicyclic acid 24h
Strain 712,No jasmonic and salicyclic acid
Vegetative
ZY-18,Motile
ZY-18,Motile to non-motile
- - - 2.95 -1.19 1.99 1.16 0.54 0.92 - -0.38 0.78 0.45 -0.48 -0.59 - - - - - - - - -1.67 0.65 0.27
- - - - - - - - - - - - 4.7 - - - - - - - - - - - - -
-1.2 - - -0.87 0.64 1.06 0.13 -1.57 -0.93 -0.76 -0.09 0.44 -0.31 0.12 -0.35 - - 2.38 0.97 -0.85 1.43 - 0.37 -0.39 -1.73 0.09
- - - 0.5 1.73 1.23 0.61 -0.23 -0.14 - 1.75 -1.05 1.8 -0.17 -0.14 - - - - 2.52 - - - - - -0.36
- - - - 0.6 -0.99 0.88 0.27 1.27 1.7 -1.99 0.35 2.01 -0.93 1.94 1.2 - - - 0.61 - - - -0.57 -0.27 -
- - - - - - -17.33 - - - 4.7 - - - - - - - - - - - - - - -
- - - - 3.16 - - - 4.09 - - - - - - - - - - - - - - - - -
- - - - 3.2 2.6 - 1.49 1.54 - - - - - - - - - - - - - - - 2.32 -
- - - - 0.14 1.13 0.78 0.03 0.08 - -0.86 1.15 1.82 -0.72 0.67 - - - - 3.33 - - - -1.49 - -
- - - - 1.21 1.2 -0.04 0.56 0.66 - 1.87 -0.0 -1.36 0.23 0.91 - - - - - - 1.9 - 0.26 1.12 1.12
- - - 3.67 - - 2.06 - - - - - 3.18 - - - - - - - - - - - - -
0.09 - - 2.01 -0.16 -0.16 0.54 -1.34 0.78 - -0.05 -1.19 -0.11 -0.25 0.77 2.03 - - - - - - 2.66 -1.96 - -
- - - - 0.99 1.32 0.15 -0.03 0.78 0.21 0.6 0.08 -2.24 -0.5 -2.53 0.71 1.86 - 0.94 0.12 1.82 - - -2.27 -0.77 -1.74
- - - 2.35 1.09 2.56 0.46 0.64 -1.3 - 0.87 1.92 - -1.1 1.03 - - - - - - - - - 0.48 -
- - - - - 3.25 1.63 2.49 1.61 - - - - 1.8 - - - - - - - - - 0.34 - -
- - - - - 3.96 2.36 - - - 2.39 - - - - - - - - - - - - - - -
- -0.33 0.73 1.52 -1.19 1.77 0.47 -1.96 0.46 - -4.65 -3.67 -1.51 -3.23 -1.53 -1.46 2.02 1.51 - -0.46 -0.35 -0.15 0.98 0.07 -3.93 -2.9
- - - - - - - - - - 4.7 - - - - - - - - - - - - - - -
- - - 0.88 1.4 1.15 0.05 1.38 -0.77 - -1.18 0.86 -0.18 -2.15 0.45 - - 0.54 - 1.31 - 2.21 0.53 - -1.57 -
- - - 0.47 0.88 2.2 2.23 0.76 -0.17 - -1.12 -0.14 1.59 1.91 1.15 - - - - - - - - -0.9 - -
- 1.95 - 1.83 -1.81 -0.3 1.51 0.26 1.34 1.79 - -3.14 -2.62 -0.86 1.34 - - - - - - 1.28 - -0.06 -2.6 -0.9
- - - - - - - - - - - - 4.62 - - - - - - - - - - - 0.56 -
- - - - - 2.15 - - - - - - 3.83 - - - - - - - - - - - 2.87 -
- - - - - 3.13 - - 3.08 - 3.13 - - - - - - - - - - - - - - -
-0.64 - - 2.08 0.78 0.78 0.23 -1.05 -0.05 - 0.91 -0.33 0.02 -0.44 -0.2 - - 1.53 - - 0.99 - - 0.31 1.11 0.6
- - - - 0.78 1.56 -1.06 -0.29 -0.29 - -0.13 -0.2 0.48 -1.4 0.7 - 1.53 2.6 2.18 - - - - -0.87 - -
- - - 2.06 0.46 2.05 0.44 0.36 2.0 - 0.47 - 0.53 0.61 2.41 - - - - - - - - - - -
- - - 1.69 - 1.09 - -0.01 - 2.8 - 0.08 1.2 - 1.03 - - - - 2.71 - - - -0.39 - -
- - - - - 4.7 - - - - - - - - - - - - - - - - - - - -
- - - - 0.49 1.32 2.2 0.37 0.44 - 1.25 0.96 2.11 0.39 0.7 - - - - - - - - -1.02 1.21 -1.1
-1.34 - - 0.57 -0.01 -1.62 0.03 -0.42 1.25 1.09 -0.02 0.18 1.09 0.22 1.25 - 0.16 0.24 - 1.0 0.7 - 0.23 -0.9 -0.88 -0.87
- - - - 1.1 - - 1.97 - - 2.69 - 1.21 0.95 1.07 - - - - - - - - - 2.83 -
- - - 2.26 - 1.18 1.04 - 0.41 - 0.53 - - -0.34 - - - 2.51 - - - - 2.5 0.97 - -
0.1 - - -3.29 -0.15 2.7 1.18 -1.29 0.68 0.68 -0.87 -1.0 -0.65 -1.41 -0.76 - -1.92 0.53 -0.32 -0.48 0.6 -1.18 0.9 0.38 -1.07 -4.01
- - - 3.17 -0.28 0.57 1.72 -0.06 1.1 - 0.84 1.1 1.56 -1.91 -0.53 - - - - - -2.41 - - -1.88 - -
- - - - 3.39 - - - 2.37 - - - - - - - - - - - - - - 1.41 - 2.95
0.41 - - - 1.11 -0.5 0.13 -1.6 -0.88 1.21 -0.43 0.33 0.17 -0.86 0.82 0.87 0.31 0.35 1.0 - 0.82 1.01 - -1.08 -0.72 -0.17
0.71 -0.48 - -0.96 1.21 0.77 -1.58 0.14 0.11 - 0.75 0.61 -0.3 0.19 -1.0 - 1.22 - 0.88 1.06 - - 0.28 -0.03 0.34 0.29
- - - - -1.01 0.58 -0.82 - 0.53 - 0.58 2.32 2.59 1.31 -1.08 - - 1.84 - - - - - 0.37 -0.28 -0.27
- - - - - 2.38 2.35 - 2.33 - - 2.35 2.47 - - - - - - - - - - - - -
- - - - 0.36 0.34 - - 3.1 - - 0.33 0.44 1.93 0.27 - - - - - - - - -0.15 2.07 1.1
- - - - - - 2.45 - 4.0 - - - - - - - - - - - - - - - 2.19 -
- - - - 1.01 0.42 -0.57 0.35 -0.62 - -0.35 0.41 0.59 0.5 -0.61 - - - - - 1.89 - 2.26 0.54 1.1 1.18
- - - - - - - - - - - - 4.7 - - - - - - - - - - - - -
- - - - - 2.99 3.98 - - - - - - - - - - - - - - - - 1.15 - -
- - - - - 2.02 - - - - - - - - 1.99 - - 3.87 - - - - - - 1.75 -
- - - - 1.3 1.88 1.37 1.12 - - 1.29 0.33 1.47 0.28 2.55 - - - - - - - - 0.66 - -
- - - - - - - - 2.56 - - - 2.7 - - - - - - - - - - 1.83 3.33 -
- - - -0.71 0.88 1.51 -0.17 -0.41 -0.35 - 0.02 1.15 0.71 1.01 -0.77 - - 1.54 2.12 0.3 - - - 1.19 - -
2.88 - - - 2.47 0.88 - - - - - - 2.97 0.72 0.8 - - - - - - - - - - -
0.11 -0.58 - -1.06 0.16 0.43 1.39 -0.46 0.69 - -0.09 -0.33 1.07 0.54 0.82 0.55 0.12 0.19 - - 0.65 - -0.82 0.43 0.39 -0.33
1.84 - - - 1.59 1.17 0.58 0.53 - - 1.31 0.55 2.03 -0.58 2.11 - - - - - - - - - - 0.31
- - - - - 4.7 - - - - - - - - - - - - - - - - - - - -
1.42 - - - 0.1 - 0.06 0.92 1.62 2.79 - 0.06 - - - - - 2.93 - - - - - -0.52 - -
- - - - - 3.5 1.89 - - - - 1.89 - - 2.86 - - - - - - - - - - -
- - - - 2.19 3.17 - - - - 3.29 - - - - - - - - - - - - 1.4 - -
- - - - - - 0.64 -0.03 0.03 - -0.92 1.41 2.0 0.99 0.6 2.27 1.84 - - - - - - -0.48 1.38 -
- - - - 1.26 -0.32 0.75 0.52 2.42 - 0.78 -0.36 1.37 - 1.61 - - - - - - - - -0.05 1.38 1.39
2.16 - - - 1.38 -0.43 -0.11 -0.48 - 2.27 - -0.46 0.66 1.45 -0.47 - 2.34 - - - - - - -0.13 - -
- - - - -0.98 0.01 -2.57 0.42 1.08 0.13 0.23 1.34 0.59 -0.89 -0.93 0.93 2.19 0.27 - 0.03 0.73 - 0.26 -0.9 -0.85 -0.24
- - - 2.87 - 2.86 - 2.14 1.23 - - 1.26 - - 1.2 - - - - - - - - - - -
- -3.26 -0.04 -2.79 0.78 0.54 0.72 0.62 0.5 -0.93 2.03 0.71 0.24 0.46 0.37 -1.83 - 0.79 - -19.69 -2.39 1.81 - -1.32 -1.87 -0.9
- - - -0.8 0.21 1.42 2.19 0.65 0.73 - 1.91 1.08 1.49 0.39 0.15 - - - - - - - - -2.38 0.92 -0.65
- -1.35 - - - - 1.95 - 3.11 -10.21 - 0.43 0.62 - 3.15 - - - - - - - - 0.41 - -
1.09 - - - -0.75 1.57 -0.05 0.47 0.77 0.94 0.91 1.05 -0.03 0.5 0.51 - - 2.08 - - - - - -1.45 - 0.99
- - - - 0.72 3.32 0.7 - - - 0.95 1.74 - - 2.24 - - - - - - - - - 1.45 -
- - - - - - - - - - - - 4.7 - - - - - - - - - - - - -
- - - - - 4.7 - - - - - - - - - - - - - - - - - - - -
1.55 0.66 - 1.57 0.85 1.11 0.33 - - 1.82 -0.88 0.23 1.85 - 0.71 - - - 1.01 - - -0.34 - - - -
- - - - 0.99 1.97 1.93 -0.16 1.73 - -2.02 0.58 1.45 -0.39 1.09 - - - - - - - - 0.89 1.03 -0.29
-1.14 - - - 1.41 0.6 -0.27 -0.54 1.05 1.88 1.01 -1.36 -0.23 0.55 1.25 - 0.37 - - - 1.9 - - -0.49 -0.68 -0.66
- - - - 0.99 - 1.15 -0.2 1.92 - 2.85 1.54 1.65 - - - - - - - - - - 1.2 0.69 -
- - - - - 1.91 - - 0.86 - 0.91 0.89 - - - - - 3.76 - - - - - - - 1.67
- - - 2.09 -0.71 1.02 -0.22 -0.83 -0.77 - -0.31 -1.3 -0.58 -0.68 -1.38 0.89 - 2.12 - 0.3 - - 1.52 0.3 0.42 0.43
- - - - - - - - - - - - 3.78 - 3.61 - - - - - - - - - - -
- - - - - - 0.73 - 2.05 - - - - - - - - - 0.89 3.39 - - - 1.21 1.48 1.49
- - - - 2.19 - -0.23 0.54 1.54 2.29 1.25 -0.37 - - -0.48 - - - - - 2.9 - - - - -
- - - 1.85 1.07 0.27 0.6 0.45 0.53 - 1.74 0.25 1.37 1.02 0.77 - - - - - - - - -0.08 0.57 0.59
- - - - - 0.65 2.27 -0.04 1.33 - 1.12 1.05 1.91 0.09 1.33 - - - - - - - - -0.71 1.37 0.38
- - - 0.24 -1.35 1.83 2.37 -1.46 -0.4 - -1.35 1.65 1.19 2.27 0.92 - - - - - - - - 1.04 - -
- - - - - 3.42 - - - - - - - - 3.24 - - - - - - - - - 2.53 -
- - - - - - - - - - 4.7 - - - - - - - - - - - - - - -
- - - - - - - - - - 4.7 - - - - - - - - - - - - - - -
- - - - 0.22 1.77 0.79 -0.56 0.87 0.59 0.71 -0.3 0.13 -0.97 -0.14 1.44 -0.68 - - 0.59 - - -0.89 0.72 1.22 0.46
- - - - - - - - 4.11 - - - - - 3.12 - - - - - - - - - - -
1.46 - - - - - 1.38 1.09 1.73 - - - 0.45 0.04 1.72 - - - - - - - 3.03 0.42 - -
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
- - - - 1.16 3.83 -10.17 -10.51 -0.46 - -0.55 1.28 1.29 -0.94 0.81 - - - - - - - - - 0.0 -
2.13 - - 1.46 - -0.11 - - 2.14 - 1.87 -0.15 - 0.86 1.4 - - - - - - - - - 0.59 1.61
- - - - - - - - 2.0 - 2.05 - 3.79 - 2.01 - - - - - - - - - - -
- - - - - 4.7 - - - - - - - - - - - - - - - - - - - -
-0.71 -2.04 - - 0.61 0.4 0.1 -0.68 0.32 0.28 -0.51 0.04 -0.26 -1.08 -2.01 - 2.01 -0.17 1.81 -0.0 1.15 - 0.36 -0.8 -0.31 -0.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.