1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_311 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000605.29 (tig00000605_g2495.t1)
 -0.85 -0.57 -0.45 -0.06 0.28 0.66 0.52 0.19 0.23 -0.18 -0.01 0.24 -0.97 -0.83 -0.22 0.05 -0.08 0.36 0.44 0.0 -1.51 -0.5 0.52 0.02 0.51 -0.04
Cpa|evm.model.tig00001286.2 (tig00001286_g8018.t1)
 -0.87 -0.82 -0.34 -0.48 0.11 -0.11 0.58 0.47 0.27 0.16 -0.46 -0.53 -1.39 -0.07 0.05 0.86 -0.38 0.77 0.52 -0.2 -2.44 -0.56 0.78 0.02 0.54 -0.45
Cpa|evm.model.tig00020539.32 (tig00020539_g10425.t1)
 -1.28 -1.89 -0.44 -0.06 0.39 0.81 0.87 0.53 0.1 0.3 0.11 0.49 -0.98 -0.7 -0.7 -0.92 -0.84 0.08 0.57 -0.79 -2.26 -2.53 0.69 0.49 1.1 0.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.