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Heatmap: Cluster_235 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000507.25 (tig00000507_g1779.t1)
 -4.19 -1.25 -1.05 -0.59 0.1 -0.29 0.73 0.34 0.52 0.02 0.51 -0.44 -4.23 0.03 -0.68 -0.34 0.17 -0.09 0.05 0.23 -2.09 -1.85 -0.09 1.41 1.55 0.21
Cpa|evm.model.tig00000525.7 (tig00000525_g1950.t1)
 -0.5 -0.44 -0.52 -0.19 -0.07 -0.0 0.2 0.05 0.31 0.53 0.37 0.02 -0.19 -0.66 -0.01 -0.28 -0.05 -0.12 -0.2 -0.01 -2.06 -0.11 0.04 0.96 0.74 -0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.