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Heatmap: Cluster_231 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000123.27 (tig00000123_g6932.t1)
 0.01 -1.47 -1.46 -0.35 -1.03 -0.04 -0.38 0.44 0.72 0.46 0.94 0.17 1.01 -1.37 -0.59 -2.94 -2.63 -0.35 -2.18 -2.1 -0.56 -0.48 2.43 0.02 0.07 -1.41
Cpa|evm.model.tig00021013.38 (tig00021013_g17071.t1)
 -0.1 -2.63 -1.76 0.99 0.78 -0.8 -0.65 -0.83 -0.52 -0.27 0.79 -0.08 -1.48 -0.98 -1.43 -0.81 -2.67 0.7 - -0.64 -1.15 -0.47 2.6 -0.52 0.8 0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.