Heatmap: Cluster_291 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00020611.13 (tig00020531_g10064.t1)
0.08 0.62 1.51 0.88 0.36 -0.34 -0.27 0.33 -0.32 -0.47 -1.02 -1.87 -0.19 -0.69 -0.56 -1.99 0.14 -0.74 0.41 0.97 -3.96 0.36 -2.35 - 0.1 1.16
Cpa|evm.model.tig00020816.33 (tig00020816_g14120.t1)
- - 2.63 0.35 0.1 0.41 0.41 - - - - 0.51 0.29 - - - - - - 1.05 -0.04 1.07 - - 0.75 2.42

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.