Heatmap: Cluster_238 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00001155.14 (tig00001155_g7320.t1)
-2.52 - - -2.7 -1.37 -1.17 0.31 0.39 -1.57 -1.16 0.5 - -2.76 1.32 1.74 -0.74 -1.57 1.55 1.6 -3.04 0.6 0.28 0.61 -2.05 0.75 -0.19
Cpa|evm.model.tig00020902.60 (tig00020902_g15015.t1)
-1.82 -1.71 -0.84 - - -0.39 - -1.0 -0.97 -0.01 -0.01 0.47 -0.48 0.71 0.74 0.87 -1.76 1.58 1.16 0.19 -0.14 0.28 0.74 0.73 -0.58 0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.