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Heatmap: Cluster_258 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00020614.16 (tig00020614_g12129.t1)
 -0.85 -0.48 -0.49 0.69 0.5 -0.4 0.36 0.09 0.48 0.57 0.59 0.39 -2.7 -3.58 -1.66 -1.18 -0.28 -1.38 -1.19 -0.89 -2.52 0.05 1.95 -1.05 1.13 0.34
Cpa|evm.model.tig00020960.19 (tig00020960_g16539.t1)
 -0.53 -0.69 -0.8 0.4 0.11 0.06 -0.07 0.27 0.23 0.51 0.18 0.26 0.18 -2.65 -1.67 -2.97 -1.25 -0.39 -1.19 -1.66 -1.64 0.84 1.92 -0.02 0.51 0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.