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Heatmap: Cluster_240 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00020554.52 (tig00020554_g10834.t1)
 -0.15 0.1 0.26 0.28 0.01 -0.31 0.19 0.09 0.09 -0.03 -0.11 -0.11 -0.11 -0.09 0.44 -0.0 0.91 0.94 0.54 0.53 -3.29 -1.11 -0.95 -1.04 -1.25 -0.34
Cpa|evm.model.tig00021621.22 (tig00021621_g22979.t1)
 -0.25 -0.09 -0.43 0.06 -0.32 -0.49 -0.08 -0.2 -0.24 0.08 -0.31 -0.39 -0.54 0.22 0.54 0.38 0.68 1.12 1.1 0.87 -5.49 -0.86 -0.45 -1.0 -0.74 -0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.