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Heatmap: Cluster_161 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.196 (tig00000042_g15592.t1)
 - - - - - - - - - 3.96 - - - - - - - - - - - - 3.38 - - -
Cpa|evm.model.tig00000042.203 (tig00000042_g15595.t1)
 - - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
Cpa|evm.model.tig00000057.24 (tig00000057_g40.t1)
 - - - - - - -1.3 - - - - - -0.91 -1.89 -0.39 1.5 -0.2 1.35 2.9 1.94 - - 1.45 -0.7 0.04 1.07
Cpa|evm.model.tig00000057.62 (tig00000057_g85.t1)
 - - - - - - - - - - - - - 3.19 3.27 - - - - - - - - - - 2.85
Cpa|evm.model.tig00000144.45 (tig00000144_g9034.t1)
 0.24 -0.31 - - 0.81 - - - 0.1 1.02 1.12 1.2 - 1.53 0.01 - - 1.52 - - - 2.1 - - 0.43 1.19
Cpa|evm.model.tig00000158.102 (tig00000158_g10207.t1)
 - - - - - - - - - - - - - - - - - 0.83 - - 1.18 - - 3.72 0.31 2.91
- - - - 1.69 - 1.71 - - 1.41 - - - - - 1.39 - - - - - - - 3.1 1.86 1.0
Cpa|evm.model.tig00000215.71 (tig00000215_g18608.t1)
 - - - - - - - - - - - - - - - - - - - - 3.39 - - 1.7 - 3.61
Cpa|evm.model.tig00000248.30 (tig00000248_g21797.t1)
 - - - - - - - - - - - - - - - - - - - - - - - - - 4.7
Cpa|evm.model.tig00000254.51 (tig00000254_g22495.t1)
 - -0.69 - - - -0.69 - - 0.63 -1.06 - - - - -1.19 -0.96 1.5 2.58 -1.01 - 2.85 -1.33 0.84 -1.04 -1.55 1.17
Cpa|evm.model.tig00000254.96 (tig00000254_g22552.t1)
 - - - - - - - - - - - - - 1.38 0.89 0.43 1.61 1.16 2.1 0.67 - 0.19 1.64 1.74 -1.17 0.02
Cpa|evm.model.tig00000269.22 (tig00000411_g513.t1)
 1.15 1.6 - - - - - - - - - - - - - - - - - - - - - - 2.39 3.96
- - 2.35 - - - - - - - - - - - - - - 2.6 - - 2.94 - - - - 2.84
Cpa|evm.model.tig00000367.11 (tig00021374_g21085.t1)
 - - - - - - - - - - - - - - - 3.78 - - - - - - 2.98 - - 2.13
Cpa|evm.model.tig00000383.14 (tig00000246_g21509.t1)
 - - - - - - - - - - - - - - - - - - - - - - - - - 4.7
Cpa|evm.model.tig00000403.37 (tig00000403_g293.t1)
 - - 0.56 - - - - - - - - - - - 0.48 0.71 - 2.27 2.36 - 0.6 - 1.9 1.17 -0.05 1.62
Cpa|evm.model.tig00000403.83 (tig00000403_g343.t1)
 0.4 -3.2 0.13 -2.7 -0.22 -2.76 0.27 -0.85 -0.37 -1.86 -2.81 - -0.06 -0.72 0.82 -2.63 - 1.33 2.09 -0.13 -0.51 -0.0 1.67 0.92 - 0.48
Cpa|evm.model.tig00000411.10 (tig00000269_g23673.t1)
 - - - - 3.28 - - - - - - - - - - - - - - - - - - - 2.97 3.08
Cpa|evm.model.tig00000449.27 (tig00021318_g20133.t1)
 - - - - - 1.56 - - - - - - - - 1.22 - - 1.67 2.67 - 0.32 - 2.23 - - 2.39
Cpa|evm.model.tig00000459.49 (tig00000459_g1111.t1)
 - - - - -0.24 1.41 0.58 1.25 -0.3 - 0.54 - - -1.01 0.48 - -0.46 0.03 1.22 -0.51 - 0.86 1.2 - -0.07 2.22
Cpa|evm.model.tig00000470.5 (tig00000431_g690.t1)
 - - - - - - - - - - - - - - - - 2.91 - - - - - - - - 4.21
Cpa|evm.model.tig00000605.42 (tig00000605_g2510.t1)
 - - - - - - - - - - - - - - - - - - - - 2.19 - 1.97 - - 4.13
- - - - - 1.77 2.07 - - - - - - - 3.37 - - - - - 3.01 - - - - -
Cpa|evm.model.tig00000654.6 (tig00020801_g13911.t1)
 - - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
Cpa|evm.model.tig00000658.17 (tig00021366_g20838.t1)
 - - - - 3.77 - - - - - - - - - - - - - - - 3.63 - - - - -
Cpa|evm.model.tig00000670.25 (tig00000670_g3040.t1)
 -0.08 -0.0 -0.2 -0.28 0.38 0.53 -0.54 -0.29 -0.64 -0.76 0.22 -0.24 -0.83 -1.13 -0.03 0.56 0.2 -0.09 0.73 0.37 -2.68 -0.83 0.49 -0.34 0.84 0.71
Cpa|evm.model.tig00000741.12 (tig00001344_g8371.t1)
 0.43 - - 0.37 - 2.7 - - 1.38 0.18 - 0.41 0.19 - - - - -0.25 - - -0.69 2.29 - - -0.32 1.79
Cpa|evm.model.tig00000760.25 (tig00021583_g22659.t1)
 -0.0 2.21 0.72 -1.2 -1.09 -1.03 0.31 -1.26 - -0.38 - -1.19 - - -1.53 - - 0.01 - - 1.32 2.24 - - 1.85 1.19
Cpa|evm.model.tig00000881.28 (tig00000881_g5243.t1)
 1.2 - - - - - - - - - - - - - - - 2.03 0.52 - - 0.12 0.81 0.4 - 2.4 3.13
Cpa|evm.model.tig00001033.8 (tig00001033_g6489.t1)
 0.8 - - - - - - - 2.09 - - - - - - - - 0.35 - - 1.43 2.34 - 1.7 - 2.95
Cpa|evm.model.tig00001333.4 (tig00001333_g8181.t1)
 0.32 - 0.62 - - - - 2.3 - - - - - 0.04 0.37 - 1.85 -0.12 0.62 - 0.18 0.83 2.58 - 0.01 -
Cpa|evm.model.tig00001344.13 (tig00000310_g23978.t1)
 - 1.94 2.04 - - - - - 1.79 - - - - 1.22 - - - - - - - 1.55 - - 2.13 2.3
Cpa|evm.model.tig00001376.8 (tig00001376_g8529.t1)
 - - - - 3.77 - - - - - - - - - - - - - - - 3.63 - - - - -
Cpa|evm.model.tig00001420.12 (tig00001420_g8697.t1)
 0.39 1.16 - 0.33 - 0.16 - 0.28 - - - - - 0.99 - - 0.23 2.32 0.18 0.17 2.92 -0.14 - - - -
Cpa|evm.model.tig00020510.50 (tig00020510_g9835.t1)
 1.41 - 1.34 - - - 0.55 - 0.47 0.26 0.35 0.44 0.74 -0.24 - - - - - - - 0.09 -0.03 - 0.99 2.92
Cpa|evm.model.tig00020552.9 (tig00020552_g10482.t1)
 0.01 - - -0.05 - - 1.91 -0.1 - -0.24 -0.19 - -0.23 -0.71 - - - 1.14 2.18 - - -0.38 1.33 - - 2.61
Cpa|evm.model.tig00020629.1 (tig00020629_g12322.t1)
 - - - - - - 2.56 - - - - 2.47 - - - - - 1.77 - - - 1.96 - - - 2.86
Cpa|evm.model.tig00020681.8 (tig00020681_g12836.t1)
 - - - - - - - - - - - - - - - - - - - - - - - - - -
Cpa|evm.model.tig00020685.20 (tig00020685_g12936.t1)
 -0.35 - -1.63 0.04 -0.66 - -0.38 -0.16 0.68 -1.68 -0.66 -1.54 -0.23 0.91 1.2 0.05 - 1.1 0.79 -0.85 1.2 -0.88 0.44 - 0.56 1.34
Cpa|evm.model.tig00020801.56 (tig00020801_g13941.t1)
 1.62 - 2.15 - - - - 1.81 - - - - - 1.34 - - - - - - 0.94 - - - 1.31 3.01
Cpa|evm.model.tig00020806.29 (tig00020806_g14049.t1)
 - - -1.06 -0.27 -1.58 -1.38 - -1.26 -1.24 1.44 -0.34 - - 1.89 0.1 1.39 0.68 -0.88 -1.64 -0.49 0.05 1.35 - 0.32 0.4 1.53
Cpa|evm.model.tig00020851.24 (tig00020697_g13076.t1)
 - - - - - - 3.6 - - - - - - - - - - - 3.8 - - - - - - -
Cpa|evm.model.tig00020878.12 (tig00000949_g5732.t1)
 - - - - - - 2.88 - - - - - - - - - - - - - 2.24 - - 3.28 2.06 -
Cpa|evm.model.tig00020878.8 (tig00020878_g14856.t1)
 - - - - - - - - - - - - - - - - - - - - - - 2.49 - - 4.35
Cpa|evm.model.tig00020960.46 (tig00020960_g16572.t1)
 - - - - - - - - - - - - - - - - - - - - - - - - - 4.7
Cpa|evm.model.tig00020960.48 (tig00020960_g16574.t1)
 -3.03 0.5 -3.02 -0.15 -1.14 -2.06 0.68 -0.39 1.55 0.07 0.55 -2.93 -0.18 -1.29 -3.11 -2.0 -0.31 2.04 0.73 -0.95 1.97 -1.04 - - -0.08 -0.51
- - - - - - - - - - - - - - - 3.55 - - - - 2.58 - - - - 3.06
Cpa|evm.model.tig00021137.14 (tig00021137_g18982.t1)
 - -0.02 -0.6 -0.52 1.46 - 1.81 0.52 0.52 - -0.59 - - - - 1.36 1.84 0.41 - 0.64 - - -0.26 - 0.77 1.21
Cpa|evm.model.tig00021312.10 (tig00021312_g20046.t1)
 0.85 0.18 -0.14 -1.38 -2.86 -2.14 -2.84 -0.46 -0.51 0.12 1.24 0.05 0.82 -2.63 -0.37 - -2.07 0.05 1.58 0.32 -0.71 -1.03 1.2 -0.94 0.85 0.48
Cpa|evm.model.tig00021518.14 (tig00021518_g22032.t1)
 - - - - - - - - - - - - - - - - - - - - - - - - - 4.7
Cpa|evm.model.tig00021535.23 (tig00021535_g22229.t1)
 - - - - - - - - - - - - - - - - - - - - 2.0 - - - 2.37 4.07
Cpa|evm.model.tig00021687.9 (tig00021687_g23126.t1)
 - - - - - - - - - - - - - - - - - - - - - 2.51 - - 2.09 4.0
Cpa|evm.model.tig00021745.28 (tig00021745_g23373.t1)
 - - - - - - - - - - - - - - 3.36 - - - - - 3.01 - - - - 2.94
Cpa|evm.model.tig00021746.1 (tig00021746_g23383.t1)
 - - - - 1.99 - - - - 3.3 - - - 1.21 - - - - - - 1.36 - - - - 2.88

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.