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Heatmap: Cluster_271 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000114.19 (tig00000114_g6027.t1)
 1.17 -0.51 0.35 -0.57 1.6 1.54 -0.2 0.31 1.38 - 0.34 1.03 - 1.33 - - - -0.29 0.18 0.56 - - - - 0.26 -
Cpa|evm.model.tig00020911.7 (tig00020911_g15708.t1)
 -0.22 - 2.09 1.75 -0.01 1.69 - 0.11 - - 0.1 0.2 - 1.51 -0.16 -0.02 - - -0.27 -0.29 - -0.17 - - 1.0 -0.42
Cpa|evm.model.tig00021684.3 (tig00021680_g23058.t1)
 - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.