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Heatmap: Cluster_298 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00021179.19 (tig00021179_g19234.t1)
 -0.61 -2.43 -3.33 -2.41 -2.7 -3.39 -2.14 -2.25 -2.62 -1.67 -1.26 -1.21 -1.76 -0.01 -2.9 -4.15 -5.89 -4.82 -4.58 -1.68 1.41 1.89 2.39 2.22 1.57 0.79
Cpa|evm.model.tig00021179.20 (tig00021179_g19234.t1)
 -1.44 -4.5 -4.44 -3.46 -5.05 -4.09 -4.2 -3.39 -3.8 -1.69 -2.83 -2.31 -3.94 -0.34 -2.63 -6.21 -6.14 -5.2 -5.18 -1.67 1.56 2.18 2.63 1.98 1.86 0.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.