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Heatmap: Cluster_318 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000882.18 (tig00000882_g5263.t1)
 -1.56 -2.44 -2.02 -0.6 0.65 1.13 0.95 -0.03 0.92 -0.42 -1.0 -1.31 -1.8 -2.31 1.14 -0.19 -0.5 -0.16 -0.69 0.11 -0.35 -0.42 1.42 0.33 0.17 -0.17
Cpa|evm.model.tig00001234.1 (tig00001234_g7723.t1)
 -2.69 -1.02 -0.63 0.07 0.33 0.54 0.65 0.24 0.63 0.03 -0.05 -0.43 -2.78 -1.02 0.62 -0.12 0.08 -0.91 0.57 -0.49 -0.04 -0.71 1.02 0.2 0.42 -0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.