Heatmap: Cluster_214 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.244 (tig00000042_g15646.t1)
-0.67 -0.76 -0.65 0.08 -0.27 -0.6 0.31 0.56 0.39 0.38 0.48 0.03 -0.3 -0.34 -1.2 -0.27 0.42 -0.33 -1.11 -1.0 -2.36 0.72 0.51 0.43 0.96 0.42
Cpa|evm.model.tig00000074.4 (tig00000074_g1198.t1)
-3.44 -0.89 -1.82 -0.11 -0.91 -1.28 0.03 0.86 0.41 0.57 0.54 0.04 -2.95 -0.5 -1.44 -1.6 -0.68 0.17 -0.82 -1.56 0.6 -0.91 1.3 0.46 1.26 1.39
Cpa|evm.model.tig00000128.8 (tig00000128_g7208.t1)
-0.25 -0.73 -0.57 -0.11 -0.06 0.05 0.45 0.5 0.53 0.39 0.06 -0.24 -0.34 -0.24 -0.54 -0.16 -0.27 -0.0 -0.34 -0.2 -1.19 0.61 -0.01 0.06 0.55 0.47
Cpa|evm.model.tig00000144.107 (tig00000144_g9100.t1)
-1.34 -0.99 -0.96 -0.16 0.05 -0.34 0.02 0.05 0.29 0.33 0.51 0.11 -1.17 -0.19 -0.76 -0.22 -0.55 -0.24 -0.44 -0.85 -1.91 1.3 0.48 0.97 1.06 0.09
Cpa|evm.model.tig00000144.147 (tig00000144_g9142.t1)
-0.53 -0.71 -1.11 -0.28 -0.36 -0.73 -0.01 0.09 0.64 0.36 0.32 0.26 -0.65 -0.42 -0.66 -0.18 -0.35 0.42 -0.5 -0.6 -1.32 0.98 0.23 0.53 1.0 0.37
Cpa|evm.model.tig00000293.21 (tig00000293_g23889.t1)
-1.53 -0.41 -0.66 -0.23 0.19 -0.1 0.23 0.39 0.38 0.68 0.54 0.29 -1.38 -0.8 -1.2 -0.54 -1.31 0.35 -0.53 -1.12 -2.23 0.8 0.82 0.23 1.21 0.2
Cpa|evm.model.tig00000310.64 (tig00000310_g23988.t1)
-2.26 -2.37 -1.77 -0.48 0.09 0.14 0.29 0.2 0.34 0.25 0.39 -0.27 -1.93 0.23 -0.36 -0.08 -0.25 -0.22 0.19 -0.01 -1.67 1.2 0.1 -0.08 1.19 0.63
Cpa|evm.model.tig00000403.34 (tig00000403_g290.t1)
-0.95 -0.88 -0.53 0.83 0.71 -0.24 -0.01 0.57 0.21 0.14 0.45 -0.18 -1.24 -1.26 -1.46 -1.56 -2.22 -0.36 -0.8 -1.24 -4.1 0.59 1.27 -0.47 1.37 1.12
-0.67 -1.39 -1.02 0.87 0.49 -0.31 0.25 0.51 0.58 -0.22 0.33 -0.66 -2.59 -1.67 -2.08 -1.82 -1.7 -0.67 -1.43 -2.04 -0.89 1.14 1.42 0.23 1.62 0.47
Cpa|evm.model.tig00000605.41 (tig00000605_g2508.t1)
-1.01 -0.5 -0.61 0.73 0.59 -0.07 0.16 0.39 0.37 0.29 0.91 0.37 -1.57 -1.37 -1.61 -1.37 -1.82 -0.37 -1.15 -1.98 -3.28 0.63 1.1 0.35 1.12 0.54
Cpa|evm.model.tig00000655.46 (tig00000655_g2871.t1)
-0.57 -1.18 -1.57 -0.01 -0.18 -0.5 -0.03 0.35 0.64 0.38 0.85 0.44 -0.5 -1.0 -2.01 -1.62 -1.57 -0.51 -1.24 -1.48 -1.87 0.21 0.91 1.08 1.69 0.52
Cpa|evm.model.tig00000663.26 (tig00000663_g2958.t1)
-1.02 -1.36 -1.21 -0.66 -0.59 -0.38 0.33 0.47 0.32 0.58 0.51 -0.02 -0.67 -0.57 -0.9 -0.78 0.18 -0.14 -0.77 -0.41 -1.81 1.03 0.4 0.16 1.31 0.82
Cpa|evm.model.tig00000663.52 (tig00000663_g2985.t1)
-1.82 -1.52 -0.64 0.89 0.56 -0.13 0.41 0.43 0.42 0.16 0.59 0.08 -2.67 -1.2 -1.28 -1.32 -1.31 -0.5 -0.9 -1.45 -2.21 0.91 1.05 0.4 1.12 0.78
Cpa|evm.model.tig00000788.32 (tig00000788_g4089.t1)
-2.79 -2.18 -1.14 -0.77 -0.29 -0.25 0.06 0.23 0.12 0.45 0.56 0.28 -1.94 -0.72 -1.21 -0.92 -0.92 0.3 -0.0 -0.93 0.26 0.85 1.0 0.75 0.93 0.9
Cpa|evm.model.tig00000836.20 (tig00000836_g4703.t1)
-0.99 -0.51 -1.26 -0.01 -0.2 -0.38 0.25 0.23 0.65 0.31 0.33 0.32 -1.02 -0.84 -0.71 -0.12 -0.71 0.06 -0.7 -1.06 -1.09 0.69 0.29 0.83 1.26 0.34
Cpa|evm.model.tig00000857.29 (tig00000857_g4956.t1)
-1.1 -0.51 -0.31 0.02 -0.45 -0.8 -0.07 0.2 0.35 0.42 0.76 0.7 -0.79 0.06 -0.59 -0.18 -0.63 -0.35 -0.65 -0.62 -1.83 0.79 0.4 0.38 0.86 0.42
Cpa|evm.model.tig00000865.43 (tig00000865_g5094.t1)
-0.63 -1.05 -0.59 0.23 -0.04 0.28 0.58 0.58 0.67 0.33 0.34 -0.28 -0.47 -0.84 -1.36 -0.83 -0.77 -0.23 -0.38 -1.09 -2.04 1.01 0.24 0.05 1.13 0.46
Cpa|evm.model.tig00000870.7 (tig00000870_g5126.t1)
-0.3 -0.55 -0.67 0.07 0.06 -0.23 0.32 0.31 0.29 0.29 0.46 0.09 -0.05 0.03 -0.73 -0.15 -1.63 -0.51 -1.5 -1.49 -2.76 0.77 0.7 0.18 1.1 0.66
Cpa|evm.model.tig00000940.25 (tig00000940_g5559.t1)
-1.13 -1.65 -0.66 -0.21 -0.41 -0.07 0.32 0.47 0.29 0.39 0.33 0.42 -0.52 -0.84 -1.94 -0.43 -0.78 0.4 -0.47 -0.4 0.27 0.09 1.03 -0.1 0.51 0.96
Cpa|evm.model.tig00001056.10 (tig00001056_g6630.t1)
-1.17 -1.74 -1.43 -0.01 -0.0 -0.44 -0.16 0.3 0.56 0.37 0.24 -0.0 -2.0 -0.26 -0.97 -0.34 -0.95 0.12 -0.51 -1.27 -0.57 0.79 0.37 1.22 1.39 0.41
Cpa|evm.model.tig00001154.35 (tig00001154_g7299.t1)
-2.33 -0.71 -0.85 0.59 0.36 -0.04 -0.04 0.34 0.3 0.12 0.51 -0.28 -3.06 -1.9 -1.65 -1.86 -1.7 0.14 -0.77 -1.33 -1.91 1.18 0.74 0.94 1.34 1.03
Cpa|evm.model.tig00001187.12 (tig00001187_g7461.t1)
-2.03 0.05 0.16 0.25 -0.44 -0.73 0.06 0.08 0.55 0.55 1.04 0.22 -3.86 -0.36 -0.57 -0.4 -0.6 -0.14 -0.35 -0.68 -2.05 0.72 0.65 -0.06 0.82 0.46
Cpa|evm.model.tig00001215.15 (tig00001215_g7580.t1)
-1.96 -1.08 -1.0 0.58 0.32 -1.0 -0.06 -0.2 0.45 0.34 0.17 0.0 -1.86 -0.24 -0.37 -0.2 -0.45 -0.36 -0.25 -0.88 -3.41 1.16 0.65 0.85 1.21 0.31
Cpa|evm.model.tig00001215.18 (tig00001215_g7584.t1)
-0.19 -0.18 -0.29 0.23 0.21 -0.32 0.04 0.32 0.19 0.06 0.36 -0.0 0.01 -0.45 -0.39 -0.46 -0.78 0.07 -0.27 -0.88 -2.03 0.7 0.49 0.26 0.8 0.15
Cpa|evm.model.tig00001264.22 (tig00001264_g7878.t1)
-0.1 -0.5 -0.39 0.15 -0.16 -0.52 -0.09 0.28 0.12 0.18 0.56 0.19 -0.27 -0.9 -0.98 -1.23 -0.75 0.32 -0.4 -0.76 -2.16 1.01 0.96 0.32 0.86 0.22
Cpa|evm.model.tig00001292.19 (tig00001292_g8052.t1)
-0.59 -0.56 -0.64 0.28 0.33 -0.3 0.13 0.28 0.34 0.19 0.36 0.06 -0.52 -0.09 -0.88 -0.39 -0.58 0.28 -0.46 -0.71 -1.95 0.53 0.48 0.41 0.75 0.52
Cpa|evm.model.tig00001327.7 (tig00001327_g8254.t1)
-2.5 -1.91 -1.64 -0.44 -0.79 -1.03 0.51 0.24 0.91 0.61 0.56 0.23 -1.55 0.11 -0.88 -0.08 -1.03 0.12 -0.83 -1.3 -0.91 1.04 0.53 0.47 1.57 -0.1
Cpa|evm.model.tig00001532.4 (tig00001532_g9271.t1)
-1.59 -1.53 -0.92 0.15 0.02 -0.28 0.17 0.16 0.3 -0.29 0.36 -0.25 -1.77 -0.43 -1.1 -0.43 -0.77 -0.29 -0.16 -0.86 -1.68 0.94 0.83 0.92 1.45 0.75
Cpa|evm.model.tig00020557.2 (tig00020557_g11107.t1)
-0.32 -0.85 -1.08 0.31 0.37 -0.65 0.01 0.13 0.45 -0.03 0.33 -0.25 -1.05 -1.13 -1.23 -0.92 -1.72 -0.42 -0.58 -1.21 -1.07 1.21 1.19 0.07 1.51 0.52
Cpa|evm.model.tig00020564.8 (tig00020564_g11411.t1)
-0.28 -1.29 -0.75 -0.2 -0.75 -0.93 -0.29 0.14 -0.03 0.27 0.54 0.44 -0.45 0.23 -0.99 -0.38 -0.81 -0.19 -0.4 -0.72 -1.51 1.29 0.1 0.66 1.04 0.83
Cpa|evm.model.tig00020614.4 (tig00020614_g12117.t1)
-0.29 -0.71 -0.84 0.06 -0.16 -0.74 0.09 0.21 0.39 0.34 0.47 0.3 -0.97 -0.38 -0.6 -0.1 -0.74 0.28 -0.24 -0.98 -1.75 0.44 0.37 0.65 0.93 0.69
Cpa|evm.model.tig00020800.17 (tig00020800_g13735.t1)
-2.02 -0.89 -1.02 0.36 0.34 0.07 0.49 0.37 0.16 -0.05 0.22 -0.16 -1.82 -0.64 -1.06 -0.78 -0.31 -0.32 -0.39 -1.14 -2.96 1.24 0.79 0.52 1.22 0.58
Cpa|evm.model.tig00020851.4 (tig00020851_g14703.t1)
-0.62 -1.58 -1.2 0.55 0.16 -0.23 0.44 0.36 0.68 0.3 0.36 0.03 -0.87 -1.77 -1.78 -2.2 -1.84 -0.19 -0.65 -0.84 -3.83 1.24 1.01 0.26 1.21 0.76
Cpa|evm.model.tig00020851.5 (tig00020851_g14704.t1)
-0.96 -1.05 -0.76 0.08 0.26 -0.27 0.4 0.36 0.25 0.17 0.32 0.04 -1.1 -1.29 -1.29 -1.13 -1.24 -0.17 -0.81 -0.73 -2.95 1.4 1.06 0.82 0.98 0.42
Cpa|evm.model.tig00020960.42 (tig00021035_g17254.t1)
-2.3 -0.73 -1.91 0.14 0.61 -0.53 0.36 0.79 0.42 0.14 -0.37 -0.8 -3.0 -1.38 -2.64 -1.48 -0.98 0.55 -0.49 -2.48 -2.06 1.08 0.97 0.97 1.57 0.76
Cpa|evm.model.tig00021035.17 (tig00021035_g17250.t1)
-1.29 -2.24 -1.84 -0.23 -0.18 -0.53 0.21 0.25 0.71 0.57 0.68 0.19 -1.35 -0.28 -1.0 -0.08 -0.94 -0.51 -1.1 -1.38 -1.85 1.31 0.4 0.91 1.38 0.23
Cpa|evm.model.tig00021073.7 (tig00021073_g18010.t1)
-2.82 -0.85 -2.61 0.26 0.11 -0.48 0.22 0.2 0.6 0.17 0.48 -0.25 -3.15 0.15 -1.27 -0.01 -0.84 0.7 -0.96 -1.57 -1.78 1.01 0.66 0.59 1.08 0.82
Cpa|evm.model.tig00021179.75 (tig00021179_g19290.t1)
-0.46 -0.91 -0.54 -0.19 0.05 -0.02 0.31 0.53 0.72 0.53 0.35 -0.14 -0.55 -0.15 -0.37 -0.35 -0.32 -0.01 -0.3 -0.3 -0.48 0.69 -0.07 -0.42 0.61 0.12
Cpa|evm.model.tig00021281.32 (tig00021281_g19929.t1)
-1.38 -1.04 -0.6 0.31 0.25 -0.52 -0.02 0.13 0.02 0.23 0.48 0.44 -0.88 -0.0 -0.64 0.08 0.13 -0.7 -0.86 -0.95 -0.78 0.95 0.16 0.42 0.97 0.47
Cpa|evm.model.tig00021293.24 (tig00021293_g20015.t1)
-1.07 -0.81 -0.55 0.24 -0.17 -0.63 -0.2 0.16 0.02 0.2 0.58 0.38 -0.66 -0.1 -0.86 -0.21 -0.84 -0.16 -0.58 -0.78 -3.53 0.56 0.55 0.66 1.24 0.96
Cpa|evm.model.tig00021346.3 (tig00021346_g20373.t1)
-1.0 -1.5 -0.81 -0.18 -0.08 -0.12 0.47 0.74 0.34 0.48 0.42 0.04 -0.43 -0.21 -0.32 -0.3 -0.35 -0.66 -1.23 -1.09 -7.07 0.17 0.71 0.42 1.21 0.85
Cpa|evm.model.tig00021346.4 (tig00021346_g20373.t1)
-1.0 -1.43 -0.64 -0.27 -0.12 -0.03 0.57 0.65 0.37 0.39 0.37 0.03 -0.44 0.3 0.34 0.27 0.21 -0.51 -0.69 -0.49 -6.07 -0.01 0.28 -0.76 0.74 0.74
Cpa|evm.model.tig00021365.11 (tig00021365_g20824.t1)
-0.63 -0.95 -0.9 -0.46 0.09 0.04 0.11 -0.04 0.15 0.16 0.75 -0.15 -0.54 -1.12 -1.64 -1.83 -1.14 -0.49 -0.66 -1.28 -2.83 0.53 0.73 0.54 2.15 0.61
Cpa|evm.model.tig00021721.19 (tig00021721_g23219.t1)
-3.04 -0.86 -0.44 0.43 0.19 -0.43 0.11 0.32 0.59 0.39 0.58 0.2 -2.37 -0.48 -0.08 -0.56 -0.0 0.21 0.11 -0.77 -2.62 0.56 0.17 0.24 0.95 0.42
Cpa|evm.model.tig00021795.2 (tig00021795_g23520.t1)
-0.54 -0.35 -0.82 -0.22 -0.23 -0.64 -0.16 -0.08 0.31 0.33 0.35 0.17 -1.14 -0.58 -0.44 -0.58 -1.07 0.36 0.07 -0.36 -0.65 0.7 0.47 0.15 1.18 0.8
Cpa|evm.model.tig00022075.38 (tig00022075_g23600.t1)
-1.56 -1.61 -1.14 -0.13 -0.51 -0.78 0.37 0.47 0.79 0.65 0.36 -0.12 -2.48 -0.28 -0.91 -0.15 -0.55 0.42 -0.24 -0.53 -2.09 1.11 -0.07 0.4 1.14 0.71
Cpa|evm.model.tig00022080.17 (tig00022080_g23801.t1)
-1.71 -0.52 -0.42 0.24 0.18 0.08 -0.05 -0.08 0.48 0.23 0.68 0.83 -1.53 -0.25 -1.65 -0.71 -0.76 -0.32 -0.68 -0.52 0.07 -0.34 1.11 0.63 0.2 0.58
Cpa|evm.model.tig00022080.9 (tig00022080_g23793.t1)
-1.42 -1.34 -0.65 -0.35 -0.01 -0.16 0.3 0.18 0.53 0.39 0.12 0.17 -1.21 0.16 -0.46 0.47 -0.23 0.6 -0.37 -0.6 -0.74 0.59 -0.05 0.51 0.7 0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.