Heatmap: Cluster_226 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000293.8 (tig00000293_g23870.t1)
0.17 0.44 -0.68 0.27 0.7 0.97 0.8 1.04 -0.24 -0.98 -0.63 -1.94 0.3 -0.13 -0.83 -2.97 -1.64 0.43 -0.17 -0.34 -2.17 -1.24 -0.65 -1.89 1.8 -0.31
Cpa|evm.model.tig00000769.46 (tig00000769_g4041.t1)
-0.33 -0.12 -0.73 -0.06 0.71 0.64 0.46 0.41 -0.14 0.08 0.27 -0.42 -1.04 0.15 -0.54 -0.53 -0.42 -0.18 -0.31 -0.36 -1.57 -0.73 -0.52 -0.33 1.59 0.34
Cpa|evm.model.tig00020563.71 (tig00020563_g11250.t1)
-0.23 -0.45 -0.44 0.15 0.46 0.69 0.01 -0.08 0.2 -0.23 0.46 0.37 -0.12 0.45 -0.8 -0.4 0.25 0.21 -0.35 -0.78 -4.51 -0.22 -0.07 -0.35 0.95 0.07
Cpa|evm.model.tig00020723.47 (tig00020723_g13466.t1)
-0.5 0.0 -0.1 0.28 0.13 0.46 0.67 0.58 -0.11 -0.12 -0.08 0.23 -0.83 -0.07 -0.94 -0.53 -0.55 -0.37 -0.53 -0.42 -3.71 0.06 -0.14 -0.23 1.59 0.15
Cpa|evm.model.tig00021108.48 (tig00021108_g18340.t1)
1.24 0.28 - 0.78 0.51 1.46 0.81 2.08 - - - - 0.87 -0.88 -0.55 - - 0.06 0.53 0.5 - - - - 1.85 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.