Heatmap: Cluster_233 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000475.10 (tig00000475_g1237.t1)
0.37 0.18 0.08 0.16 0.25 -2.42 -1.04 -0.52 -0.44 0.54 0.94 0.8 0.81 -0.93 -2.23 -0.22 -0.64 -0.74 -2.04 -0.51 -1.07 -0.39 -0.6 1.6 0.57 0.05
Cpa|evm.model.tig00000949.6 (tig00000949_g5717.t1)
-0.37 0.33 0.51 0.63 0.22 -0.59 -0.3 -0.48 -0.04 0.24 0.67 1.26 0.27 -1.22 -1.9 -1.63 -0.75 -0.66 -1.09 -0.39 -1.06 -0.26 0.19 1.08 0.49 -0.23
Cpa|evm.model.tig00021105.39 (tig00020902_g14962.t1)
0.64 1.03 0.49 1.01 -0.19 -1.45 -1.01 -0.62 0.07 0.43 0.83 0.56 0.95 -1.32 -2.52 -1.24 -0.28 -1.27 -3.24 -0.81 -2.64 -1.13 -1.66 1.1 1.16 -0.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.