Heatmap: Cluster_310 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00020660.2 (tig00020938_g16152.t1)
- - - -1.18 - -0.12 0.75 - - -1.34 -0.31 -1.16 -1.36 0.17 1.4 0.73 0.94 -0.14 1.36 1.01 - 1.24 - 0.23 0.9 1.43
Cpa|evm.model.tig00020951.26 (tig00020938_g16152.t1)
-2.58 - -2.57 -1.55 -0.38 -0.27 -2.37 -2.55 -2.53 -2.69 -2.56 - -1.16 0.29 1.34 0.24 -2.37 1.0 0.89 0.56 -0.42 1.41 -2.08 -2.67 1.32 2.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.