Heatmap: Cluster_77 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.27 (tig00000042_g15417.t1)
-2.16 -2.68 -2.6 -1.29 -0.88 -1.36 -0.88 -0.73 -0.31 -0.18 -0.1 -0.63 -2.1 -0.96 -1.23 -1.2 -1.32 -0.11 -0.7 -1.72 2.63 1.08 1.53 0.75 0.67 0.47
Cpa|evm.model.tig00000076.151 (tig00000076_g2442.t1)
-2.08 -2.03 -2.33 -1.94 -1.63 -1.36 -1.52 -1.4 -0.94 -1.12 -0.96 -0.9 -2.0 -1.07 -1.33 -1.28 -1.45 -1.06 -0.81 -1.69 3.65 -1.1 1.62 0.27 -1.07 -0.77
Cpa|evm.model.tig00000093.83 (tig00000093_g3511.t1)
-2.2 -2.03 -1.76 -1.15 -0.76 -1.14 -0.42 -0.48 -0.24 -0.34 -0.3 -0.75 -2.26 -0.02 -1.12 -0.03 -1.08 -0.29 -0.5 -1.27 2.55 0.81 0.62 0.78 0.79 0.68
Cpa|evm.model.tig00000133.26 (tig00001208_g7541.t2)
- - - - - - -1.0 -2.45 - - - -2.25 - -2.92 - - - - - - 4.2 0.78 1.75 -0.15 -1.41 -1.88
Cpa|evm.model.tig00000169.21 (tig00000169_g11893.t1)
-0.45 -1.52 -2.74 -2.34 -1.95 -2.73 -2.09 -1.14 -2.04 -2.84 -0.7 -1.81 -1.53 -0.77 0.12 -0.57 -3.21 0.59 0.71 -1.46 3.22 -0.84 0.91 0.99 -0.55 0.57
Cpa|evm.model.tig00000194.54 (tig00000194_g14784.t1)
-0.98 -1.94 -1.73 -0.48 -0.76 -1.56 -0.76 -0.44 -0.23 -0.25 0.04 -0.19 -1.14 -0.03 -1.31 -0.05 -1.01 -0.47 -1.15 -1.62 2.51 0.6 0.8 0.3 0.97 0.52
Cpa|evm.model.tig00000204.24 (tig00000204_g17693.t1)
-3.07 -2.37 -1.87 -1.19 -0.95 -1.56 -1.05 -1.1 -0.24 -0.01 0.3 0.17 -2.86 -0.7 -1.41 -0.76 -1.8 -1.2 -1.26 -2.05 3.23 -0.11 1.02 0.73 -0.28 0.09
Cpa|evm.model.tig00000237.37 (tig00000237_g20486.t1)
-2.64 -2.79 -3.0 -1.99 -1.96 -2.22 -2.22 -1.77 -1.58 -1.8 -1.59 -1.92 -3.02 -2.34 -1.82 -2.46 -3.0 -2.01 -2.02 -3.34 3.85 -0.21 2.16 -0.18 -1.01 -1.0
Cpa|evm.model.tig00000246.23 (tig00000246_g21515.t1)
-0.33 -0.46 -2.26 -0.48 0.3 0.53 -0.43 -0.41 -0.11 0.65 -0.49 -0.85 -0.39 - -2.35 -3.28 -3.06 -1.53 -0.46 - 3.6 - - -0.04 -3.88 -2.23
Cpa|evm.model.tig00000248.69 (tig00000248_g21828.t1)
-3.03 -3.14 -3.72 -3.64 - -1.7 -1.56 - -2.71 -2.22 -1.77 -1.3 -1.89 -0.96 -1.58 -1.1 -1.62 -0.72 0.37 -2.95 4.04 -1.71 -0.83 -0.57 -0.29 0.17
Cpa|evm.model.tig00000310.17 (tig00000310_g23938.t1)
-0.56 -1.8 -2.56 -2.31 -2.83 -2.15 -1.99 -1.57 -1.94 -1.78 -1.99 -1.93 -0.74 -0.35 0.09 -0.63 -0.8 -0.66 -0.53 -1.06 3.53 0.07 0.47 -0.5 0.43 0.12
Cpa|evm.model.tig00000310.18 (tig00000310_g23939.t1)
0.04 -0.74 -1.18 -1.08 -1.2 -1.16 -0.51 -0.31 -0.81 -0.8 -0.96 -0.85 -0.05 -0.32 -0.62 -1.05 -1.0 -0.06 -0.14 -0.93 2.94 0.22 -0.11 -0.27 0.19 0.39
Cpa|evm.model.tig00000342.18 (tig00000342_g24204.t1)
-2.36 -1.3 -0.9 0.06 0.5 0.94 -0.11 -0.46 -0.39 -0.86 -1.44 -1.66 -2.21 -0.48 -0.44 -0.18 -0.64 0.33 0.65 -0.11 2.43 -0.6 0.28 0.14 -0.59 -0.26
Cpa|evm.model.tig00000361.57 (tig00000361_g24405.t1)
-2.01 -1.42 -1.49 -1.07 -1.11 -1.16 -1.13 -0.98 -0.82 -0.84 -0.86 -0.81 -2.08 -0.32 -0.7 -0.74 -0.92 0.16 -0.35 -1.25 2.95 0.23 0.97 0.75 0.43 0.54
Cpa|evm.model.tig00000403.18 (tig00001126_g7123.t1)
- -0.91 -0.09 -2.59 - - -2.46 - - - - - -2.27 -1.83 - - - -2.34 - - 4.04 -0.74 1.71 - 0.0 1.1
Cpa|evm.model.tig00000448.25 (tig00000448_g857.t1)
-0.57 -0.06 -1.11 -1.35 -0.52 -1.06 -1.6 -1.96 -0.75 -1.72 -1.41 -0.05 -0.42 -1.74 -0.65 0.19 -2.16 0.57 0.34 -2.32 2.78 -0.7 0.89 0.06 0.83 0.45
Cpa|evm.model.tig00000459.37 (tig00000459_g1104.t1)
-0.79 -0.44 -0.62 -0.24 -0.37 -1.06 -0.26 0.06 -0.05 0.16 0.11 -0.36 -0.97 -0.02 -0.9 -0.64 -0.76 0.01 -0.26 -0.58 2.35 0.44 -0.77 -0.27 0.32 0.3
Cpa|evm.model.tig00000459.38 (tig00000459_g1104.t1)
-0.45 -0.3 -0.67 0.01 -0.02 -0.47 -0.06 0.42 0.48 0.46 0.49 0.05 -0.5 -0.61 -1.42 -1.44 -1.51 -0.75 -0.83 -1.12 2.14 0.42 -0.6 -0.29 0.13 0.3
Cpa|evm.model.tig00000523.10 (tig00000523_g1829.t1)
-1.65 -2.1 -2.4 -1.52 -0.98 -0.86 -0.85 -1.07 -0.28 -0.39 -0.13 -0.38 -1.78 -0.63 -1.14 -1.28 -1.33 -0.53 -0.68 -1.18 2.9 0.15 0.98 1.28 0.47 0.27
Cpa|evm.model.tig00000523.11 (tig00000523_g1830.t1)
-2.97 -4.38 -3.86 -3.97 -2.7 -3.49 -3.24 -3.46 -2.62 -2.42 -2.57 -2.25 -3.25 -0.44 -1.1 -1.84 -1.83 -1.76 -1.65 -2.57 3.92 0.46 0.27 1.12 -0.09 0.04
Cpa|evm.model.tig00000523.15 (tig00000523_g1833.t1)
-1.29 -2.33 -2.54 -1.2 -0.83 -1.0 -0.91 -0.74 -0.2 -0.08 0.22 -0.05 -1.54 -0.94 -1.5 -1.81 -1.46 -0.57 -0.61 -1.63 2.63 1.0 0.68 1.08 0.63 0.75
Cpa|evm.model.tig00000525.3 (tig00000525_g1946.t1)
-1.35 -1.43 -1.39 -1.41 -1.15 -1.12 -0.72 -1.06 -0.66 -0.62 -0.55 -0.54 -1.24 0.09 -0.33 0.07 -0.15 0.26 0.54 -0.35 3.03 -1.89 -0.8 -0.42 -0.38 0.7
Cpa|evm.model.tig00000545.13 (tig00000545_g1986.t1)
- - - - - - - - - - - -1.31 - - - -1.26 - - - -0.2 4.12 - -1.78 2.62 -1.08 -
Cpa|evm.model.tig00000802.26 (tig00000802_g4276.t1)
-1.45 -1.07 -1.45 -1.68 -2.07 -1.65 -1.13 -1.08 -0.99 -0.81 -1.15 -1.36 -2.0 -2.57 -1.85 -3.08 -2.25 -0.87 -1.1 -1.91 3.77 -1.23 1.07 -0.37 0.0 -0.28
Cpa|evm.model.tig00000802.63 (tig00000802_g4312.t1)
-3.53 -1.77 -2.49 -0.48 -0.67 -0.58 -0.83 -0.92 -0.4 -1.32 -1.27 -0.67 -2.38 -1.38 -2.32 -2.55 -2.51 -1.32 -1.38 -2.25 3.65 0.15 0.79 -0.0 -0.07 -0.57
Cpa|evm.model.tig00000821.43 (tig00000821_g4501.t1)
-1.75 - -1.36 - - -0.44 - -3.14 -0.41 -2.11 -3.02 -2.94 - -3.62 -3.12 -3.14 -2.06 -0.86 -0.94 - 4.2 -2.28 -0.88 -0.15 -0.35 -0.25
Cpa|evm.model.tig00000836.35 (tig00000836_g4713.t1)
- - - - - - -0.55 - - - - -0.91 - - -1.26 - 0.2 -0.11 -1.08 - 3.93 -0.4 1.35 -0.11 0.32 0.08
Cpa|evm.model.tig00000989.33 (tig00000989_g6106.t1)
-1.92 -2.19 -2.16 -1.62 -1.56 -2.25 -1.44 -1.24 -1.01 -1.12 -0.75 -1.1 -2.05 -0.52 -1.7 -1.26 -1.87 -0.67 -1.38 -1.92 3.19 0.77 1.38 0.78 0.79 0.62
Cpa|evm.model.tig00000989.38 (tig00000989_g6111.t1)
0.22 -1.09 -1.91 -1.83 -3.6 -3.48 -0.15 -1.54 -0.66 -0.58 -1.21 -0.59 -1.81 -1.81 -3.75 -2.43 -2.4 -1.01 -0.44 -2.18 3.77 -2.82 0.23 -1.38 0.49 -0.43
Cpa|evm.model.tig00001041.4 (tig00001041_g6546.t1)
-0.47 -0.8 -0.26 -0.14 -0.47 -0.72 -0.26 0.06 -0.4 -0.29 -0.25 -0.47 -0.23 -0.91 -1.77 -1.18 -3.21 -1.91 -1.85 -1.45 3.15 -1.78 -0.68 -1.89 0.44 1.05
Cpa|evm.model.tig00001093.22 (tig00001093_g6899.t1)
-1.54 -1.51 -1.4 -1.14 -0.79 -0.89 -0.8 -0.99 -0.91 -0.81 -0.75 -0.96 -1.9 -0.1 -0.6 -0.69 -0.53 -0.11 0.03 -0.63 2.81 0.46 0.7 0.54 0.41 0.56
Cpa|evm.model.tig00001098.17 (tig00001098_g7068.t1)
-2.8 -2.85 -2.7 -1.76 -1.32 -1.71 -1.04 -0.86 -0.88 -0.91 -1.11 -1.42 -2.94 -0.87 -1.78 -1.17 -1.47 -0.53 -0.71 -1.73 3.67 -0.42 0.56 -0.56 0.35 0.45
Cpa|evm.model.tig00001224.20 (tig00001224_g7642.t1)
- - -0.22 -0.64 - -0.97 - -2.33 -2.23 -2.27 - - -1.03 0.41 -0.83 - -2.25 0.4 0.18 -1.54 3.6 -1.62 1.53 0.74 -1.09 -1.08
Cpa|evm.model.tig00001278.15 (tig00001278_g7994.t1)
-3.44 -1.43 -0.92 -1.78 -1.12 0.11 -0.23 -1.12 -0.1 -2.35 -2.3 -2.36 -4.87 -3.03 -0.92 -1.07 -0.73 -1.03 -0.39 -1.39 3.54 -2.01 1.11 -3.15 1.23 -1.1
Cpa|evm.model.tig00001428.5 (tig00001428_g8723.t1)
-0.03 -0.42 -0.52 -0.72 -1.08 -1.87 -1.12 -0.9 -1.39 -0.93 -0.84 -0.9 -0.05 -0.36 -0.19 -0.12 -0.69 -0.16 -0.41 -1.06 2.88 -0.27 0.44 -0.67 0.68 0.2
Cpa|evm.model.tig00001428.6 (tig00001428_g8725.t1)
-0.15 -0.62 -0.95 -0.94 -0.73 -0.19 0.11 0.18 0.08 0.29 0.15 -0.1 -0.3 -1.32 -0.54 -1.22 -0.96 -0.2 -0.17 -0.53 2.04 -0.36 0.64 0.45 0.51 -0.2
Cpa|evm.model.tig00020509.14 (tig00021535_g22215.t1)
-0.01 -2.05 -1.4 -0.95 -1.81 -4.45 -2.8 -1.97 -2.82 -4.55 -2.17 -3.36 -0.37 -3.31 - -2.84 - -3.82 -3.63 -4.84 3.3 -0.3 1.93 1.68 1.13 0.65
Cpa|evm.model.tig00020553.268 (tig00020553_g10753.t1)
-1.2 -4.26 -3.41 -1.35 -2.29 -3.89 -2.4 -1.48 -1.47 -2.01 -0.91 -3.4 -2.12 -2.52 -2.64 -2.73 -3.39 -1.04 -2.87 -1.93 4.15 -0.69 -0.11 0.22 -1.31 -1.1
Cpa|evm.model.tig00020553.269 (tig00020553_g10753.t1)
-1.72 -2.74 -2.99 -2.04 -2.59 -2.45 -2.55 -1.94 -1.63 -1.47 -1.5 -1.46 -2.34 -2.22 -3.14 -2.09 -2.46 -1.95 -2.4 -4.09 4.16 -0.64 0.1 -0.19 -0.89 -0.77
Cpa|evm.model.tig00020553.34 (tig00020553_g10524.t1)
- - - 0.71 - 0.77 - 0.64 - - - - - 0.17 - - - 0.17 - - 4.24 - - - - -
Cpa|evm.model.tig00020553.40 (tig00020553_g10527.t1)
- - - - - - - - - - - - - - - - - - -0.42 - 4.3 -0.47 2.26 - - -
Cpa|evm.model.tig00020553.41 (tig00020553_g10528.t1)
- - 0.18 - - 0.2 - - - - - - - - - - - - - 0.1 4.39 - 0.81 - - -
Cpa|evm.model.tig00020563.178 (tig00020563_g11380.t1)
- - - - - - - - - - -0.37 - - - - - - 0.34 - - 4.48 - - - -1.01 0.24
Cpa|evm.model.tig00020610.106 (tig00020610_g12052.t1)
-3.21 -2.25 -2.32 -0.77 -0.64 -1.29 -0.69 -1.08 -0.59 -0.78 -0.06 -1.05 -2.81 -0.76 -2.01 -2.12 -2.31 -0.48 -0.64 -1.06 2.89 0.7 1.33 0.73 1.11 0.54
Cpa|evm.model.tig00020693.25 (tig00020693_g13032.t1)
-2.31 -2.65 -3.37 -3.44 -2.16 -3.83 -2.13 -1.93 -3.41 -2.21 -1.46 -1.63 -1.07 -1.66 -2.16 -1.81 -1.51 -1.23 -0.67 -2.84 3.98 1.63 -3.81 -0.78 -0.37 -0.97
- - - - - - - - - - - - - - - - - - - - 4.7 - - - - -
Cpa|evm.model.tig00020723.44 (tig00020723_g13464.t1)
-1.43 -1.74 -2.38 -1.68 -1.26 -1.35 -1.25 -1.52 -2.39 -0.93 -1.58 -0.05 -0.98 -1.17 -3.67 -1.62 -3.8 -0.98 -1.11 -2.14 3.41 -0.33 1.69 0.87 0.43 -0.33
Cpa|evm.model.tig00020723.95 (tig00020723_g13505.t1)
-2.8 -2.75 -2.56 -1.4 -1.64 -2.04 -1.46 -1.14 -0.92 -1.02 -0.89 -1.45 -2.82 -1.34 -2.17 -1.33 -2.26 -1.19 -1.72 -2.3 3.79 0.15 0.65 0.24 -0.21 -0.05
Cpa|evm.model.tig00020816.34 (tig00020816_g14122.t1)
-0.63 -0.51 -0.59 -0.4 -0.5 -0.72 -0.35 -0.1 -0.35 -0.52 -0.51 -0.81 -0.85 -0.15 -0.69 -0.95 -0.48 0.65 0.44 -0.18 2.19 -0.07 0.2 -0.58 0.52 0.64
Cpa|evm.model.tig00020825.8 (tig00020825_g14289.t1)
-1.36 -1.56 -1.82 -1.48 -1.51 -1.86 -1.64 -1.29 -0.81 -0.74 -0.57 -1.05 -1.28 -3.11 -2.7 -2.07 -3.17 -2.49 -2.32 -3.61 4.0 -0.84 0.39 -0.94 -0.96 -0.81
Cpa|evm.model.tig00020830.8 (tig00020830_g14389.t1)
-1.47 -1.58 -2.06 -1.89 -2.64 -3.37 -1.82 -1.33 -1.0 -0.55 -0.45 -0.6 -0.89 -3.21 -4.06 -1.86 -2.68 -1.11 -3.1 -2.07 3.37 0.76 1.24 1.03 0.93 -0.06
Cpa|evm.model.tig00020892.19 (tig00020892_g14920.t1)
-0.07 -0.41 -0.53 0.02 -0.04 -0.58 0.09 0.21 -0.03 0.27 0.45 0.2 -0.32 -0.53 -1.41 -1.05 -0.59 -0.74 -0.6 -0.71 1.78 0.17 0.32 -0.05 0.45 -0.01
Cpa|evm.model.tig00020996.25 (tig00020996_g16938.t1)
-2.56 -3.52 -4.06 -2.59 -3.93 -5.07 -3.13 -2.97 -3.49 -2.78 -2.01 -2.49 -3.31 -5.28 -6.19 -4.56 -5.78 -3.87 -4.54 -9.49 4.26 -0.31 0.31 0.46 -0.06 -0.56
Cpa|evm.model.tig00021013.29 (tig00021013_g17057.t1)
-0.83 -0.64 -0.49 -0.23 -0.12 -0.57 0.04 0.19 0.01 0.1 0.08 -0.22 -1.05 -0.03 -0.55 -0.36 -0.36 0.39 -0.14 -0.3 2.02 -0.89 -0.1 0.11 -0.24 0.36
Cpa|evm.model.tig00021013.30 (tig00021013_g17058.t1)
-0.92 -0.58 -0.51 -0.29 -0.05 -0.09 0.04 0.04 0.04 0.07 -0.05 -0.36 -1.16 0.08 -0.23 -0.26 -0.18 0.15 0.29 -0.05 1.92 -0.97 -0.25 -0.06 -0.12 0.14
Cpa|evm.model.tig00021036.56 (tig00021036_g17332.t1)
-1.99 -2.1 - - - -1.67 -1.23 - - - - - - - -1.78 -1.54 - 0.22 - -2.06 4.08 -1.94 -2.06 0.77 -1.33 1.7
Cpa|evm.model.tig00021037.54 (tig00021037_g17462.t1)
-2.21 -1.85 -1.76 -1.0 -1.05 -1.48 -1.1 -0.65 -0.74 -0.85 -0.97 -1.26 -2.07 -1.38 -0.79 -1.4 -1.72 -0.39 -0.91 -1.73 3.27 0.97 1.08 0.21 0.11 0.29
Cpa|evm.model.tig00021042.5 (tig00021042_g17600.t1)
- - - - - - - - - - - - - - - - - - - - 4.13 0.3 -0.9 2.06 -0.01 0.66
Cpa|evm.model.tig00021126.18 (tig00021126_g18467.t1)
-2.75 -3.02 -3.96 -0.69 -1.94 -0.86 -0.82 -0.69 -0.16 -0.82 -0.13 -1.09 - -1.83 -2.02 -1.94 -2.38 -0.53 -0.96 -2.47 2.98 1.25 1.65 0.54 0.47 0.66
Cpa|evm.model.tig00021127.163 (tig00021127_g18848.t1)
- - - - - - - 0.03 - - 1.38 - - -0.34 - - - - -0.53 - 4.31 0.03 - - - -
Cpa|evm.model.tig00021352.39 (tig00021352_g20708.t1)
-3.33 -2.32 -2.0 -2.43 -0.96 -0.58 -0.63 -1.19 -0.36 -0.99 -2.31 -1.69 -3.34 -1.81 -2.03 -1.53 -2.35 -1.22 -0.35 -2.7 3.66 -0.39 1.58 -0.88 -0.17 -0.18
Cpa|evm.model.tig00021374.3 (tig00021374_g21085.t1)
-2.49 - - - - - -1.73 - - - - - - - - - -1.95 - -1.39 - 4.56 -2.44 0.09 - - -
Cpa|evm.model.tig00021432.6 (tig00021432_g21197.t1)
-0.92 -0.66 -0.78 -0.77 -0.39 0.27 -0.08 -0.07 0.28 -0.06 -0.26 -0.5 -0.88 -0.63 -0.17 -0.59 -0.65 0.07 -0.03 -0.49 2.53 0.05 -0.11 -0.25 -0.37 -0.77
Cpa|evm.model.tig00021501.2 (tig00021501_g21942.t1)
0.41 -0.95 -1.18 -1.34 -1.06 -2.13 -1.02 -0.63 -1.6 -0.35 -0.79 -0.11 0.5 -0.17 0.17 -0.79 -1.92 0.29 -0.6 -1.06 2.95 -0.48 -0.03 -0.18 -0.52 0.26
Cpa|evm.model.tig00021721.9 (tig00021721_g23207.t1)
-0.95 -0.69 -0.81 -0.51 -0.11 -0.56 -0.53 -0.29 0.31 0.29 0.33 -0.23 -1.81 -1.24 -1.87 -1.23 -1.34 -1.36 -0.76 -1.25 2.18 1.05 1.56 0.24 -0.01 -0.09
Cpa|evm.model.tig00022075.10 (tig00022075_g23573.t1)
-0.84 -0.76 -0.59 -0.52 -1.48 -2.16 -2.19 -1.69 -1.44 -1.57 -1.24 -1.1 -1.11 -1.02 -0.64 -0.83 -1.64 -0.17 -0.65 -1.38 2.81 1.01 1.48 0.84 0.43 0.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.