Heatmap: Cluster_82 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.45 (tig00001071_g6794.t1)
- - - 3.29 - - - 3.42 - - - - - - - - - 2.46 - - - - - - - -
Cpa|evm.model.tig00000053.5 (tig00000053_g23488.t1)
-0.5 -0.26 -0.55 -0.48 -1.06 -1.82 -1.18 -1.13 -1.55 -1.8 -1.59 -1.36 -0.55 0.97 0.04 -1.17 -0.72 2.18 1.17 2.6 -0.19 -0.99 -3.2 -0.98 -1.32 -3.37
Cpa|evm.model.tig00000056.13 (tig00000056_g24060.t1)
0.72 0.38 0.14 0.15 - 0.27 - 0.35 -0.88 - -0.93 0.81 - 0.09 -0.12 0.73 - 2.07 1.1 - - 1.86 - - -1.54 0.63
Cpa|evm.model.tig00000093.171 (tig00000093_g3598.t1)
-1.69 -1.4 - -2.46 0.23 0.06 -0.53 -2.65 -0.95 -0.3 - -2.45 - - -2.79 - -2.57 2.07 2.01 0.6 -0.51 1.18 -2.2 - 2.48 0.78
Cpa|evm.model.tig00000093.2 (tig00000093_g3439.t1)
0.42 -1.76 -2.64 -0.98 -0.58 -0.96 - 0.6 -1.66 -1.73 - -1.55 -0.8 -0.08 -1.73 -1.02 - 3.11 1.43 1.4 1.33 -3.04 -3.02 -2.04 -1.71 -1.11
Cpa|evm.model.tig00000093.228 (tig00000093_g3654.t1)
-0.58 -0.96 -0.73 -0.56 -0.36 -0.18 0.36 0.23 0.33 0.48 0.06 -0.38 -1.0 0.13 0.1 0.62 -0.61 1.8 0.56 0.61 -1.25 -2.05 0.25 -0.19 -2.04 -0.59
Cpa|evm.model.tig00000093.85 (tig00000093_g3512.t1)
-0.99 -0.94 -0.73 -0.77 -0.44 -0.0 -0.37 -0.49 0.37 0.09 -0.01 0.0 -0.64 -0.22 0.22 -0.05 -0.22 1.0 0.57 -0.12 -0.14 0.02 0.47 0.66 -0.35 0.72
-0.9 -0.79 -1.91 -3.95 0.71 0.25 0.88 -0.52 -0.06 -1.49 -2.96 -0.57 -0.01 1.08 0.6 0.42 -1.68 0.85 1.54 -0.12 - 1.79 -4.57 0.08 -0.82 -4.48
Cpa|evm.model.tig00000147.71 (tig00000147_g9513.t1)
-7.23 -5.97 -6.92 - -4.95 -5.91 -4.38 -5.19 -4.85 -3.43 -3.26 -3.65 -5.73 -2.35 -2.97 -4.21 -1.92 4.43 -0.57 -2.96 0.43 -4.48 -0.38 -2.23 -4.58 -3.82
Cpa|evm.model.tig00000190.27 (tig00000190_g13849.t1)
- - - - -0.13 - - 0.86 - 2.38 2.11 1.06 - - - - - - 1.71 2.69 - - 0.31 - - -0.53
0.92 0.78 1.35 0.49 0.58 1.13 -0.46 1.1 - 0.45 0.5 -0.38 - - - - - 0.48 -0.48 1.99 - - 0.16 -0.57 -1.08 -
Cpa|evm.model.tig00000204.93 (tig00000204_g17759.t1)
-1.8 -2.67 -2.94 -2.42 -1.88 -1.74 -1.98 -2.53 -1.82 -1.42 -1.92 -2.09 -2.52 -0.09 -0.48 -1.01 -0.08 2.36 1.62 0.96 -1.73 0.49 -0.34 0.29 -0.06 2.32
Cpa|evm.model.tig00000204.99 (tig00000204_g17763.t1)
- - - - - - - - - - - - - - - - - 1.95 2.63 2.38 2.74 - 2.04 - - -
Cpa|evm.model.tig00000227.37 (tig00000227_g19827.t1)
0.61 -0.5 - - -0.38 - - 0.8 - - 1.88 1.01 0.31 - - - - 1.98 0.91 3.0 -1.02 - - - - -
Cpa|evm.model.tig00000241.46 (tig00000241_g20905.t1)
-0.7 - - 0.77 0.97 -0.5 -0.52 - - -1.75 -0.67 - -1.74 - 0.76 -0.04 -1.4 2.56 1.34 0.11 0.37 0.35 -1.14 - 0.04 1.31
- - - - - - - - - - - - - -1.06 -3.05 -0.64 -2.72 3.47 -1.72 3.64 -1.15 - -2.33 - -3.57 -
Cpa|evm.model.tig00000248.45 (tig00000248_g21809.t1)
- - - - - - - - - - - - - - -2.79 -4.08 - 2.58 -2.05 4.27 - - -4.68 -4.41 -5.63 -2.57
Cpa|evm.model.tig00000269.78 (tig00000269_g23738.t1)
-5.02 -5.73 -6.74 -6.08 -5.95 -5.37 -4.2 -5.87 -3.84 -2.33 -2.67 -3.21 -5.72 0.56 0.4 1.08 -0.75 2.31 1.55 3.06 0.15 -2.48 -0.32 -0.54 -1.45 -1.31
Cpa|evm.model.tig00000269.79 (tig00020563_g11214.t1)
-4.84 -5.31 -7.99 -3.74 -6.7 -8.09 -4.37 -6.52 -3.42 -2.65 -3.27 -3.9 - 0.63 -0.04 1.27 -0.64 2.86 1.24 2.96 -0.86 -1.24 -2.49 -0.84 -1.91 -1.34
Cpa|evm.model.tig00000269.80 (tig00020563_g11214.t1)
-4.67 -8.59 -5.51 -4.77 -6.82 -7.93 -6.72 -6.29 -4.73 -2.9 -3.96 - - 0.66 0.11 1.46 -0.54 2.54 1.41 3.08 -1.2 -1.03 -3.17 -0.98 -0.7 -1.27
Cpa|evm.model.tig00000269.81 (tig00000254_g22563.t1)
-5.23 -6.4 -5.25 -5.03 -5.78 -6.06 -4.9 -5.55 -4.06 -2.36 -3.36 -4.05 -6.49 0.71 0.29 1.21 -0.64 2.5 1.63 3.21 -1.51 -2.29 -2.26 -1.51 -2.99 -1.52
-4.74 -5.28 -5.24 -5.58 -3.73 -3.84 -3.76 -5.59 -3.84 -2.55 -3.82 -4.61 -7.16 0.54 0.32 1.05 -0.73 2.33 1.88 3.17 -1.23 -2.49 -2.62 -1.41 -1.05 -0.75
Cpa|evm.model.tig00000411.49 (tig00000411_g554.t1)
-0.33 - - 0.05 - - - - - - - 0.06 - 0.93 1.46 - - 3.12 2.87 0.59 -0.02 - - - - -
Cpa|evm.model.tig00000411.50 (tig00000411_g555.t1)
1.01 1.2 - - -0.98 - - - -0.7 - 0.28 - 0.71 -0.34 0.76 - -0.71 3.23 1.98 - -1.12 - - - -1.3 -1.19
Cpa|evm.model.tig00000459.72 (tig00000459_g1140.t1)
- - -1.47 - - - - - -1.72 - - - - - -0.87 - 0.1 2.9 1.77 2.58 0.33 -2.1 -2.08 0.05 1.29 0.71
Cpa|evm.model.tig00000475.2 (tig00000475_g1228.t1)
- - - -0.68 - -2.2 -2.21 -2.19 - - - - -1.82 0.07 -0.3 1.59 1.48 1.46 -0.57 3.45 1.16 - -2.59 - - -
Cpa|evm.model.tig00000523.27 (tig00000053_g23488.t1)
0.53 -0.04 -0.19 0.15 -0.44 -1.42 -0.55 -0.46 -1.0 -1.01 -0.38 -0.38 0.4 0.57 -0.53 -1.31 -1.36 1.89 0.63 2.04 -0.68 -1.14 -2.01 -0.48 -0.74 -2.09
Cpa|evm.model.tig00000555.3 (tig00000555_g2130.t1)
- - - - - - - - - - - - - -0.57 0.23 - -2.47 4.52 -0.78 - -2.83 - -2.82 - - -3.02
Cpa|evm.model.tig00000555.5 (tig00000555_g2132.t1)
0.82 0.68 0.05 0.01 -0.17 -0.87 -0.5 -0.77 0.13 0.22 0.21 0.45 0.64 0.04 0.04 -0.25 -0.33 1.53 0.12 -0.38 -3.98 -5.21 0.17 0.24 -2.87 -0.85
Cpa|evm.model.tig00000615.60 (tig00000615_g2589.t1)
0.15 0.51 0.31 0.21 0.01 -0.53 -0.9 -0.92 -1.56 -1.47 -1.29 -0.99 0.09 0.65 0.28 0.07 -0.15 1.55 0.56 1.96 -1.49 -1.13 -2.5 -0.67 -0.8 -1.24
Cpa|evm.model.tig00000718.26 (tig00000718_g3701.t1)
0.07 0.09 -0.31 -0.48 -1.31 -1.28 -0.37 -0.01 0.27 0.66 0.65 1.12 0.81 -0.16 -0.26 0.28 -0.53 1.07 0.34 0.0 -3.61 -1.95 -0.17 -0.24 -0.75 -0.29
Cpa|evm.model.tig00000870.15 (tig00000870_g5133.t1)
-1.93 -1.98 -1.05 -0.08 0.52 0.91 0.68 0.49 0.26 0.08 -0.1 -0.6 -1.95 -1.34 0.25 -1.12 -1.3 1.57 1.11 0.34 -2.87 0.19 -0.32 -1.63 0.57 -0.14
Cpa|evm.model.tig00001001.20 (tig00000157_g9677.t1)
-1.76 -0.93 -0.89 -0.88 0.17 -0.6 -1.82 -2.52 -0.41 -0.55 0.29 -0.57 -1.81 -3.07 -3.56 1.91 -1.67 2.52 1.09 2.51 -4.47 -2.73 - - -4.09 -2.9
Cpa|evm.model.tig00001220.7 (tig00001220_g7623.t1)
- - - - - - - - - - - - - 1.84 - 1.22 1.33 1.72 -0.67 2.05 0.51 1.74 - - 1.22 1.27
Cpa|evm.model.tig00020510.99 (tig00020510_g9888.t1)
-1.2 -2.63 -5.69 -3.02 -1.49 -2.65 -2.32 -1.51 -0.97 -0.83 -0.03 -0.12 -0.24 0.55 0.15 -0.21 -1.63 0.89 1.7 1.67 0.8 0.6 -0.42 1.59 -0.41 -0.87
Cpa|evm.model.tig00020542.14 (tig00021591_g22790.t1)
- - - 3.49 - - - - - - - - - - - - - 2.66 - 3.08 - - - - - -
Cpa|evm.model.tig00020616.36 (tig00020616_g12272.t1)
-1.77 -2.56 -2.29 -1.86 -1.08 -0.71 -0.63 -0.93 -1.21 -0.35 -0.37 -0.65 -1.49 1.54 -0.4 0.21 1.51 0.74 0.79 2.23 -1.28 -2.04 -0.42 0.24 -0.35 -0.55
Cpa|evm.model.tig00020629.3 (tig00000498_g1650.t1)
-0.96 -2.31 -0.58 -3.02 -1.13 -1.47 -0.13 -2.01 -1.09 -1.58 -0.97 -1.69 -1.09 0.52 -0.14 -0.72 -1.33 3.74 0.42 -1.45 -5.09 -2.91 -0.26 -0.56 -3.15 -2.33
Cpa|evm.model.tig00020675.105 (tig00020675_g12688.t1)
- -5.21 - - - - - - - -4.83 -4.82 -4.69 - 1.01 1.9 -2.23 -3.7 2.49 2.52 2.6 -1.71 - -1.99 0.27 -3.08 -0.85
Cpa|evm.model.tig00020688.7 (tig00020921_g15923.t1)
0.03 -1.09 0.33 - -0.96 - -0.46 -0.64 -0.68 - 0.28 - - 0.84 0.16 1.65 -0.43 0.79 1.29 2.76 - -0.06 - - -0.31 -
Cpa|evm.model.tig00020734.39 (tig00020734_g13591.t1)
-6.09 -5.05 -4.99 -7.17 -4.04 -4.99 -4.45 -7.0 -7.78 -5.72 -4.3 -5.71 -6.04 1.49 -0.4 0.23 1.35 1.26 0.66 3.39 -0.88 -1.2 -3.33 0.91 -1.07 -0.95
Cpa|evm.model.tig00020734.40 (tig00020734_g13592.t1)
- - -2.89 - -3.19 - - - - - -2.88 - - 2.46 - 1.34 0.9 1.59 0.28 3.03 0.11 - - 0.88 - -1.31
Cpa|evm.model.tig00020849.14 (tig00020849_g14644.t1)
-1.48 - -1.97 -0.61 -1.03 -0.76 -1.28 0.03 -0.05 0.61 1.12 0.43 -1.83 1.32 0.03 -4.93 0.53 -0.07 0.22 1.9 -4.85 -1.45 -0.07 -0.21 -0.19 1.0
Cpa|evm.model.tig00020849.15 (tig00020849_g14645.t1)
-1.82 - - -1.5 0.43 -0.44 -2.51 -0.59 -2.53 0.75 0.26 0.39 -2.12 1.59 -0.41 -1.45 -0.48 0.85 0.86 2.01 - -0.47 -2.89 -0.12 -0.36 1.49
Cpa|evm.model.tig00020902.16 (tig00020902_g14960.t1)
- -3.3 - - - - - - - -4.49 -4.48 -4.33 - -0.34 0.95 -0.39 -0.65 2.79 1.8 0.63 0.52 -0.04 1.13 1.13 -1.18 1.31
Cpa|evm.model.tig00020902.79 (tig00020902_g15034.t1)
-0.49 -0.12 0.47 0.69 -0.12 -0.86 -1.58 -0.52 -1.23 -0.39 -0.27 -0.18 -0.73 -5.2 -2.61 -0.03 -3.24 2.57 -0.52 0.5 -3.12 -3.74 -0.71 -0.21 1.39 0.79
Cpa|evm.model.tig00020904.62 (tig00020904_g15192.t1)
- -1.51 - - - - - -1.63 - - -1.72 -0.55 - 1.37 - 1.45 1.22 2.21 0.64 1.89 -1.32 0.09 -0.65 1.09 -1.19 1.1
Cpa|evm.model.tig00020943.17 (tig00020943_g16259.t1)
- - - - - - - - - - - - - 0.02 -1.62 0.2 - 3.79 1.59 - 0.86 -0.03 -0.88 - 0.59 0.9
Cpa|evm.model.tig00020960.12 (tig00020960_g16534.t1)
-1.25 - -1.51 -2.56 -1.0 -1.62 -0.97 -0.63 -0.28 -1.72 -1.09 -0.54 - -1.1 0.58 -0.65 -0.14 2.24 2.0 1.51 -3.08 -1.96 1.4 0.24 -2.28 0.39
Cpa|evm.model.tig00020996.42 (tig00020996_g16954.t1)
- - -0.37 - -0.47 - - - - - - - - 1.16 1.54 0.57 2.03 1.98 - 2.47 1.44 -0.76 - - -0.01 -
Cpa|evm.model.tig00021036.44 (tig00021036_g17314.t1)
-1.36 -1.12 -0.48 -1.15 -1.71 -1.97 -1.32 -0.62 -1.11 0.28 -0.33 -0.42 -1.04 0.62 0.28 -0.96 -0.63 2.17 -0.42 1.35 -3.55 -0.93 0.36 -0.17 1.49 0.43
Cpa|evm.model.tig00021036.45 (tig00021036_g17318.t1)
-1.19 -1.87 -1.66 -1.74 -1.0 -1.89 -1.2 -1.53 -1.18 -0.66 -0.43 -0.66 -1.25 -0.41 -0.21 -3.51 -1.13 1.98 -0.5 1.81 -2.52 -1.63 0.78 1.4 1.69 0.88
Cpa|evm.model.tig00021036.57 (tig00021036_g17333.t1)
0.08 - - - - - - - -0.62 - - -0.52 -0.18 - 1.26 - -0.64 3.42 -0.97 1.86 -1.55 - 1.66 - -0.23 -1.19
Cpa|evm.model.tig00021073.54 (tig00021073_g18060.t1)
-0.46 - 1.14 -0.37 - -0.43 0.0 - - -0.53 - 0.64 - -1.03 - - -0.22 1.82 1.78 -0.82 0.99 2.68 - - -1.06 -0.95
Cpa|evm.model.tig00021105.21 (tig00021105_g18232.t1)
- - - - - 3.49 - - - - - - - - - - - - - 3.89 - - - - - -
Cpa|evm.model.tig00021105.57 (tig00021105_g18269.t1)
0.78 0.66 - - - - - - - - - - - 0.5 - - - 2.05 1.88 2.49 0.15 1.29 1.57 - 0.41 -
Cpa|evm.model.tig00021127.141 (tig00021127_g18822.t2)
1.17 -0.47 0.68 1.32 -0.22 -1.03 -0.35 -0.68 -0.18 -1.15 0.66 -0.97 0.18 -0.69 -0.56 -0.84 -2.16 0.88 0.64 -2.15 -2.04 1.23 -3.77 -3.49 0.8 0.51
Cpa|evm.model.tig00021128.16 (tig00020904_g15225.t1)
- - - - - 0.68 - 1.32 - - 1.94 - - 1.81 - 0.57 0.63 2.0 - 2.91 - - - - - -
Cpa|evm.model.tig00021254.7 (tig00021254_g19683.t1)
-2.73 -0.8 -0.68 -0.51 -0.31 -0.32 -0.45 -1.8 -1.62 -0.56 -0.52 -0.94 -2.63 - -0.66 - 0.04 2.53 2.05 0.15 -0.46 1.46 -4.15 -2.23 1.04 -1.16
Cpa|evm.model.tig00021314.15 (tig00021314_g20125.t1)
-0.63 -0.94 0.71 0.79 -0.46 -1.57 -0.95 -0.03 -1.65 -1.6 -1.9 -2.02 -1.46 -0.69 -0.3 -0.74 -1.07 1.5 -0.05 2.34 -2.09 -0.14 -3.86 0.3 0.58 1.04
Cpa|evm.model.tig00021348.99 (tig00021348_g20607.t1)
-1.74 - - -2.52 -2.69 - -2.59 - -2.61 -2.71 -0.64 -2.48 - 1.4 -1.1 -0.51 0.1 2.56 -0.62 -0.11 1.9 - 2.23 0.11 -2.24 0.98
Cpa|evm.model.tig00021374.43 (tig00021374_g21126.t1)
-5.91 -3.15 -2.99 -1.38 -1.11 -0.46 -0.96 -1.57 -1.97 -0.52 -1.12 -0.9 -3.59 -0.87 -3.05 -2.48 -2.46 0.83 -1.92 2.95 -0.76 -2.26 1.97 1.0 0.45 1.26
Cpa|evm.model.tig00021433.28 (tig00021433_g21280.t1)
-0.17 -0.68 -0.45 -0.2 -0.23 -0.09 -0.36 -0.59 0.37 0.0 -0.22 -0.19 -0.77 -0.04 -0.13 0.21 -0.33 1.35 0.45 -0.47 0.23 0.7 -0.31 -0.13 0.41 -0.49
Cpa|evm.model.tig00021440.3 (tig00021440_g21532.t1)
- - - - - - - - - - - - - - - 0.15 0.36 2.0 0.09 - 2.19 -0.23 -0.5 3.35 -0.51 0.59
Cpa|evm.model.tig00021612.4 (tig00021612_g22852.t1)
-0.26 - 0.04 -0.0 - - 1.15 - - 1.55 - 0.13 - 1.2 -0.04 - - 1.3 0.84 1.54 0.35 - 0.53 - -0.57 1.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.